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Os08g0468700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.5 (0.0379) R2 : 0.765
β1 : -0.728 (0.139) R2dD : 0.0147 R2D : -0.00014
β2 : 4.61 (0.145) R2dC : 1.18 R2C : 0.65
β3 : 1.59 (0.168) R2dE : 0.106 R2E : -0.422
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.131 (0.0805) R2dN8 : 0.00219 R2N8 : -0.00683
σ : 0.704
deviance : 228.31
__
_____
C
peak time of C : 7.56
E
wheather : wind
threshold : 10.32
memory length : 70
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 11.2
open length of G : 12.1

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
217.45 0.693 13.5 -0.848 4.57 1.57 2.37 3.01 -0.151 7.57 9.406 85 11.1 11.8
227.37 0.702 13.5 -0.791 4.59 1.59 0.755 -- -0.115 7.62 9.537 75 11.1 12.1
228.02 0.703 13.5 -0.979 4.63 1.66 -- 1.85 -0.204 7.46 9.185 72 11.2 11.9
228.31 0.704 13.5 -0.728 4.61 1.59 -- -- -0.131 7.56 10.32 70 11.2 12.1
440.92 0.978 13.9 -1.26 -- 2.96 -- -3.95 -0.676 -- 26.74 1080 15.3 14.4
252.82 0.745 13.6 -0.558 3.59 -- 0.749 -- -0.182 8.2 -- -- -- --
254.51 0.747 13.6 -0.537 3.59 -- -- -- -0.183 8.17 -- -- -- --
246.49 0.731 13.7 -0.617 -- 3.51 -- -- -0.139 -- 43.96 1038 18 11.2
240.89 0.723 13.5 -- 4.63 1.4 -- -- -0.0786 7.51 14.52 68 11.2 12.1
966.05 1.45 13.7 -0.509 -- -- -- -- -0.141 -- -- -- -- --
262.12 0.757 13.6 -- 3.59 -- -- -- -0.123 8.18 -- -- -- --
254.2 0.743 13.7 -- -- 3.3 -- -- -0.0969 -- 101.2 1038 18.1 11
972.88 1.46 13.6 -- -- -- -- -- -0.0841 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 218.50 wind 9.0 90 < th dose dependent rect. 11 12
5 221.15 wind 5.0 90 < th dose independent rect. 11 12
8 222.29 humidity 80.0 30 < th dose independent rect. 11 5
10 222.72 wind 5.0 90 < th dose independent rect. 11 20
18 223.64 humidity 90.0 30 < th dose dependent rect. 11 5
23 224.27 radiation 1.0 270 < th dose dependent rect. 18 11
29 224.59 humidity 70.0 270 > th dose independent rect. 18 11
34 225.05 wind 7.0 270 < th dose independent rect. 18 11
35 225.05 temperature 10.0 90 > th dose dependent rect. 23 12
39 225.28 radiation 1.0 270 < th dose independent rect. 18 11
42 225.50 temperature 10.0 720 > th dose dependent rect. 23 1
45 225.74 temperature 10.0 270 > th dose dependent rect. 21 12
53 226.06 atmosphere 995.0 270 > th dose independent rect. 18 11
56 226.13 humidity 60.0 720 > th dose independent rect. 5 6
60 226.28 temperature 30.0 270 < th dose independent rect. 18 11
61 226.33 temperature 15.0 720 > th dose independent rect. 7 10
62 226.33 wind 9.0 270 < th dose independent rect. 5 13
63 226.35 temperature 15.0 270 > th dose independent rect. 5 13
64 226.36 humidity 60.0 720 > th dose independent rect. 21 14
66 226.40 humidity 50.0 720 > th dose independent rect. 6 9
67 226.57 temperature 15.0 90 > th dose independent rect. 23 12
72 226.66 wind 7.0 720 < th dose independent rect. 1 21
78 226.73 humidity 60.0 90 > th dose independent rect. 23 12
79 226.75 humidity 50.0 14400 > th dose dependent rect. 3 4
87 226.90 wind 1.0 720 > th dose dependent rect. 14 4
88 226.92 precipitation 0.1 270 < th dose independent rect. 1 12
89 226.92 precipitation 0.1 270 < th dose dependent rect. 1 12
91 226.95 wind 7.0 90 < th dose dependent rect. 11 20
92 226.98 wind 3.0 720 > th dose independent rect. 14 3
93 226.98 temperature 10.0 270 > th dose independent rect. 18 11
99 226.98 atmosphere 1015.0 270 < th dose independent rect. 5 13
100 227.02 temperature 15.0 270 > th dose independent rect. 21 12
102 227.05 precipitation 0.1 720 < th dose independent rect. 5 13
103 227.05 precipitation 0.1 720 < th dose dependent rect. 5 13
105 227.12 radiation 40.0 720 < th dose independent rect. 15 9
109 227.18 precipitation 0.1 720 < th dose independent rect. 1 5
111 227.18 precipitation 0.1 720 < th dose dependent rect. 1 5
124 227.48 precipitation 0.1 720 < th dose independent rect. 6 11
125 227.48 precipitation 0.1 720 < th dose dependent rect. 6 11
128 227.50 precipitation 0.1 720 < th dose independent rect. 13 5
129 227.50 precipitation 0.1 720 < th dose dependent rect. 13 5
132 227.53 radiation 1.0 720 > th dose independent rect. 9 6
133 227.58 wind 9.0 720 < th dose dependent rect. 2 19
134 227.60 wind 9.0 270 < th dose dependent rect. 24 22
136 227.65 precipitation 0.1 270 < th dose independent rect. 13 12
137 227.65 precipitation 0.1 270 < th dose dependent rect. 13 12
139 227.67 radiation 20.0 10 < th dose dependent rect. 8 14
141 227.68 atmosphere 1015.0 90 < th dose independent rect. 23 12
142 227.69 radiation 1.0 720 < th dose dependent rect. 18 3
143 227.73 temperature 15.0 720 > th dose independent rect. 14 19
147 227.80 atmosphere 995.0 10 > th dose dependent rect. 20 11
151 227.86 temperature 10.0 90 > th dose independent rect. 11 12
153 227.86 atmosphere 995.0 90 > th dose independent rect. 23 12
158 227.93 radiation 40.0 720 < th dose dependent rect. 17 14
160 227.96 humidity 60.0 270 > th dose independent rect. 21 12
164 227.99 humidity 50.0 14400 > th dose dependent rect. 5 1
165 228.01 radiation 40.0 720 < th dose independent rect. 15 18
166 228.03 radiation 1.0 30 > th dose independent rect. 11 5
170 228.05 radiation 10.0 720 < th dose independent rect. 1 5
175 228.09 atmosphere 995.0 720 > th dose independent rect. 17 13
177 228.09 temperature 15.0 30 > th dose dependent rect. 16 19
179 228.13 atmosphere 995.0 720 > th dose independent rect. 9 6
186 228.20 temperature 10.0 720 > th dose dependent rect. 6 3
188 228.22 temperature 15.0 720 > th dose independent rect. 21 5
189 228.22 wind 9.0 90 < th dose independent rect. 23 12
194 228.32 temperature 15.0 270 > th dose independent rect. 13 12
195 228.33 temperature 20.0 10 > th dose independent rect. 23 12
196 228.33 radiation 10.0 10 < th dose independent rect. 9 13
197 228.35 wind 1.0 720 > th dose independent rect. 13 5
202 228.37 wind 9.0 720 < th dose independent rect. 17 14
213 228.43 temperature 15.0 720 > th dose independent rect. 24 23
216 228.44 wind 7.0 720 < th dose independent rect. 17 20
217 228.47 temperature 15.0 720 > th dose independent rect. 13 5
221 228.50 atmosphere 995.0 270 > th dose dependent rect. 18 11
224 228.55 temperature 15.0 720 > th dose independent rect. 12 23
230 228.60 wind 9.0 720 < th dose dependent rect. 3 2
231 228.62 temperature 20.0 30 > th dose independent rect. 16 19
233 228.65 humidity 60.0 720 > th dose independent rect. 23 10
234 228.65 temperature 10.0 720 > th dose dependent rect. 22 3
236 228.67 wind 7.0 720 < th dose independent rect. 17 22
237 228.68 radiation 1.0 720 > th dose independent rect. 6 3
243 228.71 wind 7.0 720 < th dose independent rect. 11 2
245 228.71 radiation 40.0 270 < th dose independent rect. 21 12
246 228.73 radiation 1.0 720 < th dose dependent rect. 17 16
248 228.75 temperature 10.0 270 > th dose independent rect. 9 12
251 228.75 atmosphere 995.0 270 > th dose independent rect. 21 12
252 228.75 atmosphere 995.0 720 > th dose independent rect. 18 19
254 228.77 humidity 90.0 14400 < th dose dependent rect. 5 2
261 228.81 precipitation 0.1 270 < th dose independent rect. 18 11
262 228.81 precipitation 0.1 270 < th dose dependent rect. 18 11
265 228.85 wind 9.0 270 < th dose independent rect. 21 12
271 228.89 radiation 20.0 10 < th dose dependent sin 20 NA
278 228.96 temperature 15.0 720 > th dose independent rect. 6 19
280 228.98 wind 7.0 720 < th dose independent rect. 18 3
281 228.98 temperature 15.0 720 > th dose independent rect. 6 3
292 229.11 radiation 10.0 720 < th dose dependent rect. 1 5
298 229.14 temperature 10.0 720 > th dose independent rect. 9 6
299 229.14 atmosphere 1015.0 720 < th dose independent rect. 9 6
307 229.17 radiation 1.0 720 < th dose dependent rect. 21 6
309 229.18 temperature 30.0 720 < th dose independent rect. 21 6
310 229.18 humidity 50.0 720 > th dose independent rect. 21 6
313 229.18 atmosphere 995.0 720 > th dose independent rect. 21 6
314 229.18 radiation 1.0 720 < th dose independent rect. 21 6
319 229.18 temperature 10.0 720 > th dose independent rect. 3 18
325 229.19 wind 1.0 1440 < th dose dependent rect. 6 1
329 229.24 temperature 10.0 720 > th dose independent rect. 11 10
331 229.24 temperature 10.0 720 > th dose independent rect. 21 14
332 229.24 atmosphere 995.0 720 > th dose independent rect. 21 14
334 229.25 wind 9.0 720 < th dose dependent rect. 1 5
351 229.34 wind 5.0 720 < th dose independent rect. 6 3
352 229.34 radiation 20.0 10 < th dose dependent rect. 12 10
355 229.35 wind 1.0 10 > th dose dependent rect. 16 19
357 229.36 humidity 80.0 30 < th dose independent rect. 16 19
363 229.39 atmosphere 995.0 720 > th dose independent rect. 18 3
377 229.42 wind 9.0 720 < th dose independent rect. 21 14
416 229.53 atmosphere 1015.0 720 < th dose independent rect. 23 1
417 229.53 temperature 10.0 720 > th dose independent rect. 23 10
419 229.53 atmosphere 995.0 720 > th dose independent rect. 23 10
420 229.53 temperature 10.0 720 > th dose independent rect. 9 14
425 229.56 wind 9.0 720 < th dose independent rect. 23 10
436 229.61 wind 9.0 720 < th dose independent rect. 21 6
442 229.64 radiation 10.0 10 > th dose independent rect. 11 20
444 229.65 radiation 30.0 720 < th dose independent rect. 17 14
446 229.66 wind 9.0 720 < th dose independent rect. 9 5
453 229.68 atmosphere 1015.0 720 < th dose independent rect. 7 10
454 229.68 temperature 10.0 720 > th dose independent rect. 17 14
460 229.71 radiation 10.0 10 > th dose independent rect. 11 7
493 229.78 atmosphere 995.0 720 > th dose dependent rect. 18 3
504 229.82 wind 7.0 90 < th dose dependent rect. 3 19
505 229.83 humidity 60.0 720 > th dose independent rect. 6 3
510 229.85 temperature 10.0 270 > th dose independent rect. 1 12
512 229.85 atmosphere 995.0 270 > th dose independent rect. 1 12
513 229.85 atmosphere 1015.0 270 < th dose independent rect. 1 12
518 229.89 radiation 10.0 10 < th dose independent rect. 13 9
522 229.90 wind 1.0 270 > th dose independent rect. 5 13
526 229.92 wind 1.0 270 > th dose independent rect. 13 11
527 229.93 wind 7.0 720 < th dose independent rect. 1 5
531 229.95 temperature 10.0 720 > th dose independent rect. 1 5
532 229.95 temperature 30.0 720 < th dose independent rect. 1 5
533 229.95 humidity 50.0 720 > th dose independent rect. 1 5
536 229.95 atmosphere 995.0 720 > th dose independent rect. 1 5
546 229.99 humidity 80.0 270 < th dose independent rect. 11 2
549 230.01 temperature 30.0 270 < th dose dependent rect. 18 10
551 230.03 temperature 30.0 270 < th dose independent rect. 21 12
556 230.05 precipitation 0.1 720 < th dose independent rect. 21 5
558 230.05 precipitation 0.1 720 < th dose dependent rect. 21 5
560 230.06 atmosphere 995.0 720 > th dose independent rect. 24 15
579 230.14 atmosphere 1015.0 720 < th dose independent rect. 13 5
580 230.14 temperature 10.0 720 > th dose independent rect. 18 19
598 230.20 humidity 50.0 720 > th dose independent rect. 22 17
601 230.22 humidity 50.0 30 > th dose independent rect. 22 18
617 230.29 precipitation 0.1 720 < th dose independent rect. 6 3
618 230.29 precipitation 0.1 720 < th dose dependent rect. 6 3
626 230.33 wind 9.0 720 < th dose independent rect. 17 6
627 230.33 atmosphere 995.0 270 > th dose independent rect. 5 13
629 230.34 temperature 15.0 720 > th dose independent rect. 23 1
635 230.36 wind 9.0 720 < th dose independent rect. 5 6
658 230.45 atmosphere 995.0 720 > th dose independent rect. 17 6
667 230.47 precipitation 0.1 720 < th dose independent rect. 6 19
668 230.47 atmosphere 1015.0 720 < th dose independent rect. 21 21
671 230.47 precipitation 0.1 720 < th dose dependent rect. 6 19
672 230.48 wind 5.0 720 < th dose independent rect. 10 5
676 230.49 radiation 1.0 720 > th dose independent rect. 11 1
680 230.49 atmosphere 995.0 720 > th dose independent rect. 6 3
681 230.49 atmosphere 1015.0 720 < th dose independent rect. 6 3
682 230.49 temperature 10.0 720 > th dose independent rect. 9 21
687 230.52 precipitation 0.1 720 < th dose independent rect. 3 9
690 230.52 humidity 90.0 270 < th dose dependent rect. 11 2
691 230.52 precipitation 0.1 720 < th dose dependent rect. 3 9
701 230.57 temperature 15.0 1440 > th dose independent rect. 12 12
712 230.60 precipitation 0.1 720 < th dose independent rect. 9 5
715 230.60 precipitation 0.1 720 < th dose dependent rect. 9 5
736 230.72 temperature 10.0 720 > th dose independent rect. 18 3
737 230.72 humidity 50.0 720 > th dose independent rect. 18 3
738 230.72 radiation 20.0 720 < th dose independent rect. 18 3
741 230.72 temperature 10.0 720 > th dose independent rect. 21 21
783 230.82 wind 9.0 270 < th dose independent rect. 13 12
784 230.82 atmosphere 1015.0 90 < th dose independent rect. 11 12
791 230.84 radiation 1.0 720 < th dose independent rect. 18 3
793 230.84 temperature 10.0 720 > th dose independent rect. 5 6
794 230.84 atmosphere 995.0 720 > th dose independent rect. 5 6
795 230.84 atmosphere 1015.0 720 < th dose independent rect. 5 6
796 230.84 temperature 10.0 720 > th dose independent rect. 11 18
799 230.85 wind 5.0 90 < th dose independent rect. 11 5
803 230.85 temperature 10.0 1440 > th dose independent rect. 24 12
806 230.85 atmosphere 995.0 1440 > th dose independent rect. 24 12
822 230.89 wind 9.0 720 < th dose independent rect. 23 1
824 230.89 temperature 30.0 720 < th dose independent rect. 23 1
825 230.89 humidity 50.0 720 > th dose independent rect. 23 1
828 230.89 atmosphere 995.0 720 > th dose independent rect. 23 1
829 230.89 radiation 1.0 720 < th dose independent rect. 23 1
838 230.89 radiation 1.0 720 < th dose dependent rect. 23 1
843 230.89 radiation 40.0 720 < th dose dependent rect. 18 3
846 230.90 temperature 10.0 720 > th dose independent rect. 11 1
847 230.90 atmosphere 995.0 720 > th dose independent rect. 11 1
848 230.90 atmosphere 1015.0 720 < th dose independent rect. 11 1
849 230.90 precipitation 0.1 720 < th dose independent rect. 11 1
853 230.90 precipitation 0.1 720 < th dose dependent rect. 11 1
857 230.91 precipitation 0.1 720 < th dose independent rect. 5 6
859 230.91 precipitation 0.1 720 < th dose dependent rect. 5 6
869 230.95 atmosphere 1015.0 720 < th dose independent rect. 21 5
907 231.04 atmosphere 1015.0 720 < th dose independent rect. 22 19
912 231.06 temperature 20.0 720 > th dose independent rect. 11 1
916 231.07 precipitation 0.1 720 < th dose independent rect. 23 1
918 231.07 precipitation 0.1 720 < th dose dependent rect. 23 1
924 231.10 wind 9.0 270 < th dose independent rect. 1 12
928 231.12 radiation 10.0 10 < th dose independent rect. 20 11
930 231.12 precipitation 0.1 720 < th dose independent rect. 21 21
932 231.12 precipitation 0.1 720 < th dose dependent rect. 21 21
937 231.15 atmosphere 1000.0 30 > th dose dependent rect. 22 9
940 231.16 atmosphere 1015.0 270 < th dose independent rect. 21 12
944 231.18 wind 1.0 720 > th dose independent rect. 11 1
945 231.18 wind 3.0 270 < th dose dependent rect. 15 4
967 231.27 wind 9.0 30 < th dose dependent rect. 11 5
972 231.29 radiation 10.0 10 < th dose dependent rect. 8 10
985 231.31 temperature 10.0 720 > th dose independent rect. 15 9
986 231.31 temperature 10.0 720 > th dose independent rect. 24 15
996 231.34 atmosphere 1015.0 30 < th dose independent rect. 16 19
999 231.34 temperature 10.0 30 > th dose dependent rect. 16 6