BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0224000 Os12g0224000|AK060284
(212 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0224000 Similar to Diacylglycerol kinase 1 (EC 2.7.1.1... 442 e-125
Os03g0425300 Similar to Diacylglycerol kinase 1 (EC 2.7.1.1... 289 8e-79
Os12g0576900 Similar to Diacylglycerol kinase 1 (EC 2.7.1.1... 236 9e-63
Os04g0634700 Similar to Diacylglycerol kinase 91 5e-19
Os08g0178700 Similar to Calmodulin-binding diacylglycerol k... 88 5e-18
Os01g0783200 Similar to Diacylglycerol kinase 88 5e-18
>Os12g0224000 Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride
kinase 1) (DGK 1) (DAG kinase 1)
Length = 212
Score = 442 bits (1138), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 1 NDVDHAAVTVLDRWNVAIKEKNGAEDQCTKQVKFMTNYIGVGCDAKVAYDFHTTREEKPD 60
NDVDHAAVTVLDRWNVAIKEKNGAEDQCTKQVKFMTNYIGVGCDAKVAYDFHTTREEKPD
Sbjct: 1 NDVDHAAVTVLDRWNVAIKEKNGAEDQCTKQVKFMTNYIGVGCDAKVAYDFHTTREEKPD 60
Query: 61 KFCSQFVNKLIYAREGAKDIMDRSCSDLPWHVSLEVDGKNVEIPEDAEGVIVLNIPSYMG 120
KFCSQFVNKLIYAREGAKDIMDRSCSDLPWHVSLEVDGKNVEIPEDAEGVIVLNIPSYMG
Sbjct: 61 KFCSQFVNKLIYAREGAKDIMDRSCSDLPWHVSLEVDGKNVEIPEDAEGVIVLNIPSYMG 120
Query: 121 GVDLWQNDNEHDDDFGLQSMHDKMLEVVCISGTWHLGKLQVGLSRAHRLAQGKVIRLHLH 180
GVDLWQNDNEHDDDFGLQSMHDKMLEVVCISGTWHLGKLQVGLSRAHRLAQGKVIRLHLH
Sbjct: 121 GVDLWQNDNEHDDDFGLQSMHDKMLEVVCISGTWHLGKLQVGLSRAHRLAQGKVIRLHLH 180
Query: 181 SSFPVQVDGEPWIQPPGCLEISHRGQVLYLSR 212
SSFPVQVDGEPWIQPPGCLEISHRGQVLYLSR
Sbjct: 181 SSFPVQVDGEPWIQPPGCLEISHRGQVLYLSR 212
>Os03g0425300 Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride
kinase 1) (DGK 1) (DAG kinase 1)
Length = 338
Score = 289 bits (740), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 169/212 (79%), Gaps = 3/212 (1%)
Query: 1 NDVDHAAVTVLDRWNVAIKEKNGAEDQCTKQVKFMTNYIGVGCDAKVAYDFHTTREEKPD 60
+D++HAAVT+LDRW VAI++K G + VK+M NY+G+GCDAKVA D H REE P+
Sbjct: 87 HDIEHAAVTILDRWKVAIEDKRG---KNVLMVKYMNNYLGIGCDAKVALDIHNLREENPE 143
Query: 61 KFCSQFVNKLIYAREGAKDIMDRSCSDLPWHVSLEVDGKNVEIPEDAEGVIVLNIPSYMG 120
KF SQF+NK++YAREGAK ++DR+ DLPW V LEVDG +EIPED+EGV+V NIPSYMG
Sbjct: 144 KFYSQFLNKVLYAREGAKSMIDRTFVDLPWQVRLEVDGTEIEIPEDSEGVLVANIPSYMG 203
Query: 121 GVDLWQNDNEHDDDFGLQSMHDKMLEVVCISGTWHLGKLQVGLSRAHRLAQGKVIRLHLH 180
GVDLW++++++ D+F QS+HDKM+EVV ISGTWHLG LQVGLSRA R+AQG+ I++ +
Sbjct: 204 GVDLWKSEDDNPDNFDPQSIHDKMVEVVSISGTWHLGTLQVGLSRARRIAQGQSIKIQIF 263
Query: 181 SSFPVQVDGEPWIQPPGCLEISHRGQVLYLSR 212
+ FPVQVDGEPW Q P L+ISH GQ L R
Sbjct: 264 APFPVQVDGEPWTQNPCTLKISHHGQAFMLRR 295
>Os12g0576900 Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride
kinase 1) (DGK 1) (DAG kinase 1)
Length = 705
Score = 236 bits (602), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 145/211 (68%), Gaps = 14/211 (6%)
Query: 2 DVDHAAVTVLDRWNVAIKEKNGAEDQCTKQVKFMTNYIGVGCDAKVAYDFHTTREEKPDK 61
DV+HAAVTVLDRW + IK+ G + Q K+M NY GVGCDAKVA D H REE P++
Sbjct: 466 DVEHAAVTVLDRWKITIKDNQG---KLMSQPKYMNNYFGVGCDAKVALDIHNLREENPER 522
Query: 62 FCSQFVNKLIYAREGAKDIMDRSCSDLPWHVSLEVDGKNVEIPEDAEGVIVLNIPSYMGG 121
F SQF+NK++YA+EGAK++MD + PW V LE+DG + IP+ SYMGG
Sbjct: 523 FYSQFMNKVLYAKEGAKNMMDNTFDYFPWDVKLEIDGSKINIPQ-----------SYMGG 571
Query: 122 VDLWQNDNEHDDDFGLQSMHDKMLEVVCISGTWHLGKLQVGLSRAHRLAQGKVIRLHLHS 181
VDLW+N+++ D+F QSMHDKMLEVV +G HLG+LQVGLSRA RLAQG I++ + +
Sbjct: 572 VDLWKNEDDVSDNFHPQSMHDKMLEVVSFTGMLHLGRLQVGLSRAQRLAQGHHIKIEIKT 631
Query: 182 SFPVQVDGEPWIQPPGCLEISHRGQVLYLSR 212
P+QVDGEPW Q P + +SH Q L R
Sbjct: 632 KMPIQVDGEPWSQDPCTIVVSHHCQAFMLKR 662
>Os04g0634700 Similar to Diacylglycerol kinase
Length = 499
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 37 NYIGVGCDAKVAYDFHTTREEKPDKFCSQFVNKLIYAREGAKD---------IMDRSCSD 87
NY +G DA+V+Y+FH+ R+ P+KF +Q N+ YA+ G K R+ +
Sbjct: 240 NYFSMGMDAQVSYEFHSERKRNPEKFKNQLTNQSTYAKLGLKQGWFAASLTHPSSRNIAQ 299
Query: 88 LPWHVSLEVDG---KNVEIPEDAEGVIVLNIPSYMGGVDLWQNDNE---HDDDFGLQSMH 141
L ++ G + ++IP ++ LN+PS+ GG++ W D D +
Sbjct: 300 LAKVRIMKRPGGQWEELKIPRSIRSIVCLNLPSFSGGLNPWGTPGTRKVQDRDLTAPFVD 359
Query: 142 DKMLEVVCISGTWHLGKLQVGLSRAHRLAQGKVIRLHLHSSFP----VQVDGEPWIQP-- 195
D ++EVV WH L RLAQ IR H +++DGEPW QP
Sbjct: 360 DGLIEVVGFRDAWHGLVLLAPNGHGTRLAQAHRIRFEFHKGAAEHTFMRIDGEPWKQPLP 419
Query: 196 ----PGCLEISHRGQVLYLS 211
+EISH QV L+
Sbjct: 420 KDDDTVVVEISHLRQVTMLA 439
>Os08g0178700 Similar to Calmodulin-binding diacylglycerol kinase
Length = 502
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 25/200 (12%)
Query: 37 NYIGVGCDAKVAYDFHTTREEKPDKFCSQFVNKLIYAREGAK------DIMDRSCSDLPW 90
NY +G DA+++Y FH+ R++ P+KF +Q N+ YA+ G K + S ++
Sbjct: 240 NYFSMGMDAEISYGFHSERKKNPEKFKNQLTNQGTYAKVGLKQGWFCASLSHPSSRNIAQ 299
Query: 91 HVSLEVDGK------NVEIPEDAEGVIVLNIPSYMGGVDLWQNDNEH---DDDFGLQSMH 141
S+++ + + I ++ LN+PS+ GG++ W + + +
Sbjct: 300 LASVKIMKRAGSHWQELNIHHSIRSIVCLNLPSFSGGLNPWGTPGTRKVEERELTAPFVD 359
Query: 142 DKMLEVVCISGTWHLGKLQVGLSRAHRLAQGKVIRLHLHSSFP----VQVDGEPWIQP-- 195
D+++EVV WH L RLAQ + IR H +++DGEPW QP
Sbjct: 360 DRLIEVVGFRDAWHGLVLLAPNGHGTRLAQAQRIRFEFHKGAAEHTFMRIDGEPWKQPLP 419
Query: 196 ----PGCLEISHRGQVLYLS 211
+EISH GQV L+
Sbjct: 420 KDDDTVVVEISHLGQVTMLA 439
>Os01g0783200 Similar to Diacylglycerol kinase
Length = 487
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 25 EDQCTKQVKFMTNYIGVGCDAKVAYDFHTTREEKPDKFCSQFVNKLIYAREGAKD----- 79
E CT + F NY +G DA+V+Y FH+ R+ P+KF +Q N+ Y +
Sbjct: 220 EYSCTFRGGFW-NYFSMGMDAQVSYAFHSERKLHPEKFKNQLSNQKTYLKLACTQGWFCA 278
Query: 80 ----IMDRSCSDLPWHVSLEVDGK--NVEIPEDAEGVIVLNIPSYMGGVDLWQNDNEHDD 133
M R+ + L ++ GK +EIP+ ++ LN+PS+ GG++ W +E
Sbjct: 279 SLCHPMSRNIAHLSKVKIMKKSGKWETLEIPQSIRSIVCLNLPSFSGGLNPWGTPSERKQ 338
Query: 134 ---DFGLQSM-HDKMLEVVCISGTWHLGKLQVGLSRAHRLAQGKVIRLHLHSSFP----V 185
D + + D +LE+V WH L RLAQ ++ H +
Sbjct: 339 RKRDLVMPPLVDDGLLEIVGFKDAWHGLVLLSPKGHGTRLAQAHRVQFKFHKGATDHAYM 398
Query: 186 QVDGEPWIQP------PGCLEISHRGQVLYLS 211
++DGEPW QP +EISH GQV L+
Sbjct: 399 RLDGEPWNQPLPKDDGKVLVEISHAGQVKMLA 430
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.137 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,019,547
Number of extensions: 342171
Number of successful extensions: 630
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 619
Number of HSP's successfully gapped: 6
Length of query: 212
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 115
Effective length of database: 11,971,043
Effective search space: 1376669945
Effective search space used: 1376669945
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)