Os12g0576900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase 1) (DGK 1) (DAG kinase 1).
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Os12g0576900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase 1) (DGK 1) (DAG kinase 1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.23 | 0.279 | 10.4 | 0.236 | 0.329 | 0.77 | -0.123 | -3.02 | 0.328 | 2.01 | 25.61 | 1183 | -- | -- |
| 36.98 | 0.283 | 10.4 | 0.903 | 0.381 | 0.479 | -0.216 | -- | 0.369 | 1.81 | 24.73 | 8057 | -- | -- |
| 35.24 | 0.276 | 10.4 | 0.237 | 0.328 | 0.806 | -- | -3.22 | 0.331 | 2.27 | 25.55 | 1117 | -- | -- |
| 37.19 | 0.284 | 10.4 | 0.91 | 0.391 | 0.467 | -- | -- | 0.383 | 1.83 | 24.4 | 8018 | -- | -- |
| 40.78 | 0.297 | 10.4 | 0.219 | -- | 0.907 | -- | -3.13 | 0.291 | -- | 24.76 | 1097 | -- | -- |
| 45.27 | 0.315 | 10.3 | 1.1 | 0.423 | -- | -0.182 | -- | 0.535 | 1.58 | -- | -- | -- | -- |
| 45.4 | 0.316 | 10.3 | 1.1 | 0.424 | -- | -- | -- | 0.536 | 1.62 | -- | -- | -- | -- |
| 44.09 | 0.309 | 10.3 | 0.934 | -- | 0.607 | -- | -- | 0.455 | -- | 24.01 | 1114 | -- | -- |
| 39.06 | 0.291 | 10.4 | -- | 0.389 | 0.971 | -- | -- | 0.104 | 1.83 | 13.7 | 46716 | -- | -- |
| 56.36 | 0.351 | 10.3 | 1.12 | -- | -- | -- | -- | 0.545 | -- | -- | -- | -- | -- |
| 77.36 | 0.411 | 10.4 | -- | 0.443 | -- | -- | -- | 0.413 | 1.7 | -- | -- | -- | -- |
| 47.91 | 0.322 | 10.4 | -- | -- | 1.07 | -- | -- | 0.088 | -- | 10.4 | 31251 | -- | -- |
| 89.34 | 0.441 | 10.3 | -- | -- | -- | -- | -- | 0.421 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.16 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 2 | 34.25 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 6 | 34.47 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 10 | 34.54 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 11 | 8 |
| 13 | 34.61 | wind | 9.0 | 43200 | > th | dose independent | rect. | 11 | 17 |
| 18 | 34.64 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 10 |
| 21 | 34.66 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 11 | 11 |
| 23 | 34.68 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 9 |
| 25 | 34.69 | wind | 9.0 | 43200 | > th | dose independent | rect. | 11 | 13 |
| 38 | 34.76 | wind | 9.0 | 43200 | < th | dose independent | rect. | 11 | 13 |
| 39 | 34.76 | wind | 9.0 | 43200 | < th | dose independent | rect. | 11 | 16 |
| 59 | 34.83 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 11 | 14 |
| 104 | 35.10 | wind | 9.0 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 111 | 35.11 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 116 | 35.13 | wind | 9.0 | 43200 | < th | dose independent | rect. | 13 | 7 |
| 122 | 35.17 | wind | 9.0 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 138 | 35.20 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 174 | 35.36 | wind | 7.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 195 | 35.40 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 9 |
| 202 | 35.41 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 204 | 35.42 | wind | 9.0 | 43200 | > th | dose independent | sin | 18 | NA |
| 228 | 35.47 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 239 | 35.48 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 246 | 35.51 | wind | 9.0 | 43200 | < th | dose independent | sin | 18 | NA |
| 278 | 35.56 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 283 | 35.58 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 327 | 35.66 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 334 | 35.68 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 351 | 35.70 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 386 | 35.72 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 403 | 35.76 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 421 | 35.78 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 424 | 35.78 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 485 | 35.84 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 7 |
| 502 | 35.85 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 520 | 35.88 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 527 | 35.89 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 544 | 35.91 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 563 | 35.93 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 564 | 35.93 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 598 | 35.95 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 4 | 8 |
| 602 | 35.95 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 603 | 35.95 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 613 | 35.96 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 22 | 14 |
| 614 | 35.96 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 627 | 35.97 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 644 | 35.97 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 15 | 18 |
| 670 | 35.99 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 19 | 11 |
| 678 | 36.00 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 679 | 36.00 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 684 | 36.00 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 693 | 36.00 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 774 | 36.04 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 12 | 18 |
| 790 | 36.05 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 813 | 36.07 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 814 | 36.07 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 820 | 36.07 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 821 | 36.07 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 836 | 36.08 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 4 | 7 |
| 844 | 36.08 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 885 | 36.10 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 903 | 36.11 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 920 | 36.13 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 926 | 36.14 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 927 | 36.14 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 928 | 36.14 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 933 | 36.15 | wind | 9.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 934 | 36.15 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 944 | 36.15 | wind | 7.0 | 43200 | > th | dose dependent | sin | 18 | NA |
| 946 | 36.15 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 954 | 36.16 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 18 | 17 |
| 955 | 36.16 | radiation | 40.0 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 956 | 36.16 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 997 | 36.18 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |