BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0432600 Os11g0432600|AK059916
(339 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0432600 Similar to Beta-keto acyl reductase (Fragment) 587 e-168
Os04g0483500 Similar to B-keto acyl reductase 298 3e-81
Os04g0116600 Glucose/ribitol dehydrogenase family protein 210 1e-54
Os06g0300200 201 6e-52
Os06g0300000 Glucose/ribitol dehydrogenase family protein 188 4e-48
Os06g0299100 Glucose/ribitol dehydrogenase family protein 187 1e-47
Os06g0299300 Glucose/ribitol dehydrogenase family protein 186 3e-47
Os06g0299200 Glucose/ribitol dehydrogenase family protein 167 9e-42
Os02g0597900 Similar to B-keto acyl reductase (Beta-ketoacy... 159 3e-39
Os06g0298700 Glucose/ribitol dehydrogenase family protein 146 2e-35
>Os11g0432600 Similar to Beta-keto acyl reductase (Fragment)
Length = 339
Score = 587 bits (1512), Expect = e-168, Method: Compositional matrix adjust.
Identities = 294/339 (86%), Positives = 294/339 (86%)
Query: 1 MESVVVAGDLXXXXXXXTPMWFXXXXXXXXXXXXXXXXTFLAWLRRAFLRPGKGLCRRYG 60
MESVVVAGDL TPMWF TFLAWLRRAFLRPGKGLCRRYG
Sbjct: 1 MESVVVAGDLAAAPAPATPMWFVALVAVGLHAAVVWAGTFLAWLRRAFLRPGKGLCRRYG 60
Query: 61 EWAVVTGATDGIGRAVALELARRGLHLVLVGRNPGKLSGVCKEVRAAAPACKVRTVVFDL 120
EWAVVTGATDGIGRAVALELARRGLHLVLVGRNPGKLSGVCKEVRAAAPACKVRTVVFDL
Sbjct: 61 EWAVVTGATDGIGRAVALELARRGLHLVLVGRNPGKLSGVCKEVRAAAPACKVRTVVFDL 120
Query: 121 AAPGDDDVGGGELSRGXXXXXXXXEGLDVGLLVNNAGATYPCAAYFHEVPDAVWEAVLRV 180
AAPGDDDVGGGELSRG EGLDVGLLVNNAGATYPCAAYFHEVPDAVWEAVLRV
Sbjct: 121 AAPGDDDVGGGELSRGVARVAAAVEGLDVGLLVNNAGATYPCAAYFHEVPDAVWEAVLRV 180
Query: 181 NVVAATRIARALVPAMAAKGRXXXXXXXXXXXXXXPAFPLYAVYAATKAYVDQLSRSLHV 240
NVVAATRIARALVPAMAAKGR PAFPLYAVYAATKAYVDQLSRSLHV
Sbjct: 181 NVVAATRIARALVPAMAAKGRGAVVNVGSGSSVVVPAFPLYAVYAATKAYVDQLSRSLHV 240
Query: 241 EYKHHGVDVQCQIPLYVATKMSPVQGNSPFIPSPEEYAKAAVRCIGYEPRCVPYWRHSIQ 300
EYKHHGVDVQCQIPLYVATKMSPVQGNSPFIPSPEEYAKAAVRCIGYEPRCVPYWRHSIQ
Sbjct: 241 EYKHHGVDVQCQIPLYVATKMSPVQGNSPFIPSPEEYAKAAVRCIGYEPRCVPYWRHSIQ 300
Query: 301 WFFASLLPDSVLNLWRLQVGIRKRNQMKVLLGESDHGFS 339
WFFASLLPDSVLNLWRLQVGIRKRNQMKVLLGESDHGFS
Sbjct: 301 WFFASLLPDSVLNLWRLQVGIRKRNQMKVLLGESDHGFS 339
>Os04g0483500 Similar to B-keto acyl reductase
Length = 318
Score = 298 bits (764), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/288 (52%), Positives = 189/288 (65%), Gaps = 10/288 (3%)
Query: 43 WLRRAFLRPGKGLCRRYGEWAVVTGATDGIGRAVALELARRGLHLVLVGRNPGKLSGVCK 102
WL AFLRPGK L RRYGEWAVVTGATDGIGRA+A A G+ LVLVGR+P KL+ V
Sbjct: 32 WLYAAFLRPGKPLRRRYGEWAVVTGATDGIGRALAFRFAGAGMSLVLVGRSPDKLAAVSG 91
Query: 103 EVRAAAPACKVRTVVFDLAAPGDDDVGGGELSRGXXXXXXXXEGLDVGLLVNNAGATYPC 162
E+R P +VRT V D AA G L+ GLDVG+LVN+AG +YP
Sbjct: 92 EIRGKHPRAEVRTFVLDFAAEG--------LAAKVAALGDSIRGLDVGVLVNSAGMSYPY 143
Query: 163 AAYFHEVPDAVWEAVLRVNVVAATRIARALVPAMAAKGRXXXXXXXXXXXXXXPAFPLYA 222
A YFHEV + + ++R+NV A TR+ A++P M + R P++PLY+
Sbjct: 144 ARYFHEVDEELMRNLIRLNVEALTRVTHAVLPGMVERKRGAIVNIGSGASSILPSYPLYS 203
Query: 223 VYAATKAYVDQLSRSLHVEYKHHGVDVQCQIPLYVATKMSPVQGNSPFIPSPEEYAKAAV 282
VYAATKAYVDQ SR L+VEYK+ G+DVQCQ+PLY ATKM+ ++ S F PSPE YA+AAV
Sbjct: 204 VYAATKAYVDQFSRCLYVEYKNKGIDVQCQVPLYAATKMASIKKASFFAPSPETYARAAV 263
Query: 283 RCIGYEPRCVPYWRHSIQWFFASLLPDSVLN--LWRLQVGIRKRNQMK 328
R IGYEPRC PYW H++ WF S P+ +++ L + VGIRKR K
Sbjct: 264 RYIGYEPRCTPYWPHAVLWFLISAFPEPIVDRLLLNMSVGIRKRGMAK 311
>Os04g0116600 Glucose/ribitol dehydrogenase family protein
Length = 319
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 171/312 (54%), Gaps = 12/312 (3%)
Query: 19 PMWFXXXXXXXXXXXXXXXXTFLAWLRRAFLRPGKGLCRRYGEWAVVTGATDGIGRAVAL 78
P+WF L +L RP K L R YGEWAVVTG T G+GR++A+
Sbjct: 7 PLWFTSLAGLGAAYLTVVFLRLLPYLALYLRRP-KDLRRCYGEWAVVTGPTTGLGRSMAM 65
Query: 79 ELARRGLHLVLVGRNPGKLSGVCKEVRAA-APACKVRTVVFDLAAPGDDDVGGGELSRGX 137
ELARRG +LVL+ + L V + +R A A A RTVVFDL+ G G GE G
Sbjct: 66 ELARRGFNLVLLDLDRDNLREVSEAIREAHAGAVATRTVVFDLSTVG---TGAGE--EGM 120
Query: 138 XXXXXXXEGLDVGLLVNNAGATYPCAAYFHEVPDAVWEAVLRVNVVAATRIARALVPAMA 197
+G++VG+LVNNA P A YFHE A++RVN +A T + A++PAMA
Sbjct: 121 RRLREAVDGVEVGMLVNNAAVARPGALYFHEADVERLVAMIRVNAMALTAVTAAVLPAMA 180
Query: 198 AKGRXXXXXXXXXXXXXXPAFPLYAVYAATKAYVDQLSRSLHVEYKHHGVDVQCQIPLYV 257
+GR P+FPLY VY++TK YV+QLS+SL+VEYK G+DVQ Q+P YV
Sbjct: 181 RRGRGAIVNVGSGSTVAVPSFPLYTVYSSTKRYVEQLSKSLYVEYKGKGIDVQLQVPFYV 240
Query: 258 ATKMSPVQGNS-----PFIPSPEEYAKAAVRCIGYEPRCVPYWRHSIQWFFASLLPDSVL 312
T M F+ + ++Y +AA R +G+ VP +QWF A+ +PD
Sbjct: 241 HTNMLSAAIKDRMLLPAFVATADDYTRAAARWVGHGHIAVPDAGQQLQWFLAAFVPDFAH 300
Query: 313 NLWRLQVGIRKR 324
+ +RL+ ++ R
Sbjct: 301 DWYRLRKHLQHR 312
>Os06g0300200
Length = 457
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 163/281 (58%), Gaps = 11/281 (3%)
Query: 50 RPGKGLCRRYGEWAVVTGATDGIGRAVALELARRGLHLVLVGRNPGKLSGVCKEVRAAAP 109
RP L RRYG WAVVTG T GIGRA+ALELA RGL++VLVGR+P KL V + +
Sbjct: 34 RPRGDLRRRYGSWAVVTGPTSGIGRAMALELAGRGLNVVLVGRDPAKLRDVAGAIARSHS 93
Query: 110 --ACKVRTVVFDLAAPGDDDVGGGELSRGXXXXXXXXEGLDVGLLVNNAGATYPCAAYFH 167
+ +TVVFD + V + + EGLDVG++VNNAG P A + H
Sbjct: 94 HHGVRTKTVVFDFSL-----VSTVQGEKAMAALRETVEGLDVGVVVNNAGVAKPGAMFLH 148
Query: 168 EVPDAVWEAVLRVNVVAATRIARALVPAMAAKGRXXXXXXXXXXXXXXPAFPLYAVYAAT 227
EV ++RVN++A T++ A++P M +GR P+FPLY+VYA T
Sbjct: 149 EVEVEPLMRMIRVNMLALTKVTAAVLPGMVMRGRGAVVNIGSASAEALPSFPLYSVYAGT 208
Query: 228 KAYVDQLSRSLHVEYKHHGVDVQCQIPLYVATKMSPVQGN----SPFIPSPEEYAKAAVR 283
KAYV + SR L VEYK G+DVQCQ+P V T M S F+ +PEEYA+AAVR
Sbjct: 209 KAYVGEFSRGLSVEYKRKGIDVQCQVPCLVETNMISRAMKDIFLSQFVVTPEEYARAAVR 268
Query: 284 CIGYEPRCVPYWRHSIQWFFASLLPDSVLNLWRLQVGIRKR 324
IG+ CVP H +Q PD VLN +RL++ +++R
Sbjct: 269 SIGHGRMCVPNMAHRVQLLGMRSTPDFVLNWYRLRLHLQQR 309
>Os06g0300000 Glucose/ribitol dehydrogenase family protein
Length = 365
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/293 (43%), Positives = 167/293 (56%), Gaps = 36/293 (12%)
Query: 59 YGEWAVVTGATDGIGRAVALELARRGLHLVLVGRNPGKLSGVCKEV-RAAAPACKVRTVV 117
YG WAV+TG T GIGR+VALELARRGL+LVLVGR+P KL V + + + + R+VV
Sbjct: 59 YGAWAVITGPTSGIGRSVALELARRGLNLVLVGRDPAKLRDVSEAISKLGDGGVETRSVV 118
Query: 118 FDLA----APGDDDVGGGELSRGXXXXXXXXEGLDVGLLVNNAGATYPCAAYFHEVPDAV 173
FDLA A GD+ V GLDVG++VNNAG PCA Y HE
Sbjct: 119 FDLALASTAEGDEAV---------RRLREAVAGLDVGVVVNNAGVARPCAVYLHEAEAEA 169
Query: 174 WEAVLRVNVVAATRIARALVPAMAAKGRXXXXXXXXXXXXXXPAFPLYAVYAATKAYVDQ 233
W ++RVN+ A T + A++P M A+GR P+FPLY+VYAATK YV +
Sbjct: 170 WVRMIRVNLWAVTEVTAAVLPGMVARGRGAVVNIGSGSTEAIPSFPLYSVYAATKRYVAE 229
Query: 234 LSRSLHVEYKHHGVDVQCQIPLYVATKMSP---------------------VQGNSP-FI 271
SRSL+VEYK G+DVQCQ PL+VAT M+ + SP F+
Sbjct: 230 FSRSLYVEYKSKGIDVQCQAPLFVATNMTSGVAKAGGGGDDAAAKGSKRRQRRWLSPLFV 289
Query: 272 PSPEEYAKAAVRCIGYEPRCVPYWRHSIQWFFASLLPDSVLNLWRLQVGIRKR 324
P+ + YA AA R IG+ C+P H +QW + +PD+V + RL+ +R+R
Sbjct: 290 PTADAYAAAAARWIGHGAVCMPNLCHRLQWCVSRAVPDAVHDRVRLRENLRQR 342
>Os06g0299100 Glucose/ribitol dehydrogenase family protein
Length = 329
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/266 (43%), Positives = 146/266 (54%), Gaps = 14/266 (5%)
Query: 57 RRYGEWAVVTGATDGIGRAVALELARRGLHLVLVGRNPGKLSGVCKEVRAAAPACKVRTV 116
RRYG WAV+TG T GIG A+ALELARRGL+LVLVGR+P +L + +R+ + + V
Sbjct: 56 RRYGAWAVITGPTSGIGCAMALELARRGLNLVLVGRDPARLREISGTIRSRHGRVQTKAV 115
Query: 117 VFDLAAPGDDDVGGGELSRGXXXXXXXXEGLDVGLLVNNAGATYPCAAYFHEVPDAVWEA 176
VFDL+ D G L R GLDVG++VNNA P A Y HE W
Sbjct: 116 VFDLSLASTPD-GDQPLRR----LREAVAGLDVGVVVNNASEGRPGAVYLHEADVEEWVR 170
Query: 177 VLRVNVVAATRIARALVPAMAAKGR-XXXXXXXXXXXXXXPAFPLYAVYAATKAYVDQLS 235
+ RVNV A T + A++P M +GR P+FPLY +YA+TK YV Q S
Sbjct: 171 MARVNVSAVTEVTAAVLPGMVERGRGGAVVNLGSAASEAIPSFPLYTMYASTKRYVAQFS 230
Query: 236 RSLHVEYKHHGVDVQCQIPLYVATKMSPVQGN------SPFIPSPEEYAKAAVRCIGY-E 288
RSLHVEY + G+ VQCQ P +V T M SP S + YA+AAV IG
Sbjct: 231 RSLHVEYANKGIHVQCQTPFFVETTMLAKLEEEVGLSVSPLKVSTDTYARAAVAWIGRGG 290
Query: 289 PRCVP-YWRHSIQWFFASLLPDSVLN 313
P C P H + W + +P+SVL+
Sbjct: 291 PLCTPGGLLHQLMWCITAAVPESVLD 316
>Os06g0299300 Glucose/ribitol dehydrogenase family protein
Length = 330
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/283 (45%), Positives = 157/283 (55%), Gaps = 14/283 (4%)
Query: 50 RPGKGLCRRYGEWAVVTGATDGIGRAVALELARRGLHLVLVGRNPGKLSGVCKEVRAAAP 109
RP L RRYGEWAVVTG T GIGRA+ALELAR GL+LVLVGR+P L + VR+
Sbjct: 48 RPKDDLRRRYGEWAVVTGPTSGIGRAMALELARHGLNLVLVGRDPAILREISGTVRSLHK 107
Query: 110 ACKVRTVVFDLAAPGDDDVGGGELSRGXXXXXXXXEGLDVGLLVNNAGATYPCAAYFHEV 169
K +TVVFDL+ D G L R EGLDVG++VNNAG P A Y HE
Sbjct: 108 -VKTKTVVFDLSLVWTPD-GDEPLRR----LREAVEGLDVGVVVNNAGVAKPGAVYLHEA 161
Query: 170 PDAVWEAVLRVNVVAATRIARALVPAMAAKGRXXXXXXXXXXXXXXPAFPLYAVYAATKA 229
W ++RVN+ A T + ++P M ++GR P PLY +YAATK
Sbjct: 162 DVEAWVRMVRVNMSAVTEVTAVVLPGMVSRGRGAIVNIGSAGSEYIPTLPLYTMYAATKR 221
Query: 230 YVDQLSRSLHVEYKHHGVDVQCQIPLYVATKM-----SPVQGNSPFIPSPEEYAKAAVRC 284
YV Q SRSLHVEY G+ VQCQ P +V T++ G S F +P+ YA+AAV
Sbjct: 222 YVAQFSRSLHVEYASKGIHVQCQAPFFVDTRLMFRFEEAAGGVSLFTVTPDAYARAAVAW 281
Query: 285 IGY-EPRCVPYWRHSIQWFFASLLPDSVLN--LWRLQVGIRKR 324
IG C P RH + A+ PDSV + L RL RKR
Sbjct: 282 IGRGGALCTPAVRHQLLRRMAAAAPDSVHDWILLRLATWNRKR 324
>Os06g0299200 Glucose/ribitol dehydrogenase family protein
Length = 296
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 147/317 (46%), Gaps = 50/317 (15%)
Query: 18 TPMWFXXXXXXXXXXXXXXXXTFLAWLRRAFLRPGKG-LCRRYGEWAVVTGATDGIGRAV 76
TP WF LA+L R KG L RRYGEWAVVTG T GIGRA+
Sbjct: 14 TPWWFILRAFVGAAYVGFVALRLLAYLWLCLPRMPKGDLRRRYGEWAVVTGPTSGIGRAM 73
Query: 77 ALELARRGLHLVLVGRNPGKLSGVCKEVRAAAPACKVRTVVFDLAAPGDDDVGGGELSRG 136
ALELAR GL+LVLVGR+P L + +
Sbjct: 74 ALELARHGLNLVLVGRDPAILRQISDTI-------------------------------- 101
Query: 137 XXXXXXXXEGLDVGLLVNNAGATYPCAAYFHEVPDAVWEAVLRVNVVAATRIARALVPAM 196
L ++VNNAG P A Y HE W ++RVNV A T + A++P M
Sbjct: 102 --------ASLSELIVVNNAGVAEPGAVYLHEADVEAWARMVRVNVSAVTEVTAAVLPGM 153
Query: 197 AAKGRXXXXXXX-XXXXXXXPAFPLYAVYAATKAYVDQLSRSLHVEYKHHGVDVQCQIPL 255
A+GR P+ PLY +Y++TK YV Q SRSLHVEY G+ VQCQ P
Sbjct: 154 VARGRGGAVVNIGSAASESIPSLPLYTMYSSTKRYVAQFSRSLHVEYASKGIHVQCQAPF 213
Query: 256 YVATKM-----SPVQGNSPFIPSPEEYAKAAVRCIGY-EPRCVPYWRHSIQWFFASLLPD 309
V T++ G S F +P+ YA+AAV IG C P RH + A+ +PD
Sbjct: 214 LVDTRLMFRFEEAAGGVSLFTVTPDAYARAAVAWIGRGGALCTPGVRHQLLRRMAAAVPD 273
Query: 310 SVLN--LWRLQVGIRKR 324
SV + L L RKR
Sbjct: 274 SVHDWILLHLTTWNRKR 290
>Os02g0597900 Similar to B-keto acyl reductase (Beta-ketoacyl reductase)
Length = 147
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 99/140 (70%), Gaps = 2/140 (1%)
Query: 191 ALVPAMAAKGRXXXXXXXXXXXXXXPAFPLYAVYAATKAYVDQLSRSLHVEYKHHGVDVQ 250
A++PAM + R P+ PLY+VYAATKAYVDQ SR L+VEYK G+DVQ
Sbjct: 1 AVLPAMVERKRGAIVNIGSGSSSVMPSDPLYSVYAATKAYVDQFSRCLYVEYKSKGIDVQ 60
Query: 251 CQIPLYVATKMSPVQGNSPFIPSPEEYAKAAVRCIGYEPRCVPYWRHSIQWFFASLLPDS 310
CQ+PLYVATKM+ ++ +S F+PS + YA+AA+R IGYEPRC PYW HS+ WF S+LP+S
Sbjct: 61 CQVPLYVATKMASIRKSSFFVPSADTYARAAIRHIGYEPRCTPYWPHSVMWFLISILPES 120
Query: 311 VLNLWRLQ--VGIRKRNQMK 328
+++ RL + IRK+ Q K
Sbjct: 121 LIDSIRLGMCIKIRKKGQAK 140
>Os06g0298700 Glucose/ribitol dehydrogenase family protein
Length = 345
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 133/269 (49%), Gaps = 26/269 (9%)
Query: 19 PMWFXXXXXXXXXXXXXXXXTFLAWLRRAFLRPGKGLCRRYGEWAVVTGATDGIGRAVAL 78
P WF LA+L + R K L RYG WAV+TG T G+GRA+AL
Sbjct: 18 PWWFLSLVFLGAAYVATVTLRLLAYLAFSLHRQPKDLRSRYGAWAVITGPTSGMGRAMAL 77
Query: 79 ELARRGLHLVLVGRNPGKLSGVCKEVRAAAPACKVRTVVFDL---AAPGDDDVGGGELSR 135
ELARRGL+LVLVGR+P L + VR+ + +TVVFDL A P D+
Sbjct: 78 ELARRGLNLVLVGRDPANLEEISNTVRSLH-GVETKTVVFDLSLVATPHGDEP------- 129
Query: 136 GXXXXXXXXEGLDVGLLVNNAGATYPCAAYFHEVPDAVWEAVLRVNVVAATRIARALVPA 195
EGLDVG+L+NNAG P AY HE W ++RVN+ A T + A++P
Sbjct: 130 -LRQLRETVEGLDVGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLWAVTEVTAAVLPG 188
Query: 196 MAAKGRXXXXXXXXXXXXXXPAFPLYAVYAATKAYVDQLSRSLHVEYKHHGVDVQCQIPL 255
M +GR P+FPL +Y+ATK +V R + + + P
Sbjct: 189 MVERGRGAVVNIGSASSQAIPSFPLCTIYSATKRHV----RGSFLP------EPSPRAPF 238
Query: 256 YVATKM----SPVQGNSPFIPSPEEYAKA 280
+VAT+M + + SPF +P YA+A
Sbjct: 239 FVATRMVENLAEARRLSPFTVTPGAYARA 267
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.138 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,667,797
Number of extensions: 423248
Number of successful extensions: 1065
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1054
Number of HSP's successfully gapped: 12
Length of query: 339
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 237
Effective length of database: 11,709,973
Effective search space: 2775263601
Effective search space used: 2775263601
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 156 (64.7 bits)