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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0432600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Beta-keto acyl reductase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.98 (0.0139) R2 : 0.0063
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0498 (0.0293) R2dN8 : 0.00814 R2N8 : 0.0063
σ : 0.262
deviance : 31.44
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.47 0.259 3.01 -0.149 0.0934 -0.566 -0.0893 2.51 0.0597 6.59 999.8 20 -- --
30.56 0.259 2.98 0.0149 0.0925 -0.12 -0.097 -- 0.0594 6.48 999.8 20 -- --
30.49 0.257 3.01 -0.149 0.0934 -0.566 -- 2.51 0.0597 6.59 999.8 20 -- --
30.58 0.258 2.98 0.0121 0.0926 -0.12 -- -- 0.0595 6.8 999.8 19 -- --
30.94 0.259 3.01 -0.147 -- -0.563 -- 2.5 0.0617 -- 999.8 15 -- --
30.95 0.261 2.98 0.0359 0.0923 -- -0.0909 -- 0.0517 6.61 -- -- -- --
30.96 0.261 2.98 0.0348 0.092 -- -- -- 0.0521 6.94 -- -- -- --
31.03 0.259 2.98 0.0155 -- -0.12 -- -- 0.0615 -- 999.8 18 -- --
30.58 0.258 2.98 -- 0.0927 -0.122 -- -- 0.0586 6.79 999.8 19 -- --
31.41 0.262 2.98 0.0367 -- -- -- -- 0.0538 -- -- -- -- --
31 0.26 2.98 -- 0.0924 -- -- -- 0.0482 6.92 -- -- -- --
31.03 0.259 2.98 -- -- -0.122 -- -- 0.0601 -- 999.8 17 -- --
31.44 0.262 2.98 -- -- -- -- -- 0.0498 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.20 atmosphere 1010.0 30 < th dose dependent rect. 2 1
3 28.25 temperature 15.0 10 > th dose dependent rect. 2 1
5 28.27 wind 3.0 10 < th dose independent rect. 2 1
7 28.27 wind 9.0 30 < th dose independent rect. 3 23
8 28.27 wind 3.0 10 < th dose dependent rect. 2 1
15 28.28 temperature 10.0 30 > th dose independent rect. 2 1
17 28.28 temperature 30.0 30 < th dose independent rect. 2 1
18 28.28 humidity 50.0 30 > th dose independent rect. 2 1
22 28.28 atmosphere 995.0 30 > th dose independent rect. 2 1
23 28.28 atmosphere 1010.0 30 < th dose independent rect. 2 1
25 28.28 radiation 1.0 30 < th dose independent rect. 2 1
30 28.28 precipitation 0.1 30 < th dose independent rect. 2 1
32 28.28 temperature 10.0 30 > th dose independent rect. 3 23
40 28.28 humidity 50.0 30 > th dose dependent rect. 2 1
44 28.28 radiation 1.0 30 < th dose dependent rect. 2 1
49 28.28 precipitation 0.1 30 < th dose dependent rect. 2 1
57 28.30 temperature 30.0 30 < th dose dependent rect. 2 1
87 28.32 atmosphere 995.0 30 > th dose dependent rect. 2 1
88 28.32 atmosphere 1005.0 30 > th dose dependent rect. 2 1
93 28.34 wind 1.0 30 > th dose independent rect. 2 1
94 28.34 atmosphere 1005.0 30 > th dose independent rect. 2 1
107 28.53 atmosphere 995.0 30 > th dose independent rect. 3 23
119 29.06 precipitation 0.1 30 < th dose independent rect. 3 23
120 29.06 precipitation 0.1 30 < th dose dependent rect. 3 23
136 29.36 wind 3.0 30 < th dose dependent rect. 24 3
141 29.39 radiation 1.0 43200 < th dose dependent rect. 3 1
143 29.40 temperature 25.0 270 > th dose independent rect. 23 3
146 29.41 wind 9.0 1440 < th dose independent rect. 3 1
147 29.41 temperature 10.0 1440 > th dose independent rect. 3 1
150 29.41 temperature 30.0 1440 < th dose independent rect. 3 1
154 29.41 humidity 50.0 1440 > th dose independent rect. 3 1
163 29.41 atmosphere 995.0 1440 > th dose independent rect. 3 1
164 29.41 radiation 1.0 1440 < th dose independent rect. 3 1
184 29.41 temperature 10.0 1440 > th dose independent rect. 4 23
188 29.41 radiation 1.0 1440 < th dose dependent rect. 3 1
221 29.50 humidity 50.0 30 > th dose independent rect. 3 23
239 29.54 humidity 90.0 90 < th dose independent rect. 2 1
286 29.68 temperature 25.0 270 > th dose dependent rect. 23 3
335 29.77 wind 1.0 30 > th dose dependent rect. 2 1
347 29.80 atmosphere 1015.0 30 < th dose independent rect. 3 23
358 29.81 radiation 20.0 10 < th dose dependent rect. 3 23
370 29.84 radiation 10.0 10 < th dose independent rect. 3 23
382 29.86 atmosphere 995.0 30 > th dose dependent rect. 3 23
424 29.92 wind 3.0 30 < th dose dependent rect. 22 5
433 29.94 humidity 50.0 30 > th dose dependent rect. 3 23
434 29.95 atmosphere 1015.0 1440 < th dose independent rect. 3 1
436 29.95 temperature 30.0 30 < th dose independent rect. 3 23
438 29.95 wind 9.0 30 < th dose dependent rect. 3 23
519 30.01 wind 3.0 30 < th dose dependent rect. 13 14
552 30.02 wind 3.0 30 < th dose dependent rect. 16 11
565 30.03 wind 3.0 30 < th dose dependent rect. 10 17
576 30.04 atmosphere 995.0 90 > th dose dependent rect. 3 16
599 30.06 wind 1.0 10 < th dose independent rect. 17 10
609 30.06 radiation 40.0 90 < th dose dependent rect. 3 8
658 30.08 humidity 50.0 30 > th dose dependent rect. 3 21
692 30.09 radiation 20.0 90 < th dose independent rect. 3 8
722 30.09 wind 9.0 90 < th dose dependent rect. 15 12
755 30.11 humidity 90.0 270 < th dose independent rect. 23 3
765 30.11 atmosphere 995.0 90 > th dose dependent rect. 3 6
773 30.11 temperature 10.0 30 > th dose dependent rect. 9 18
791 30.12 temperature 10.0 1440 > th dose independent rect. 1 3
794 30.12 temperature 30.0 1440 < th dose independent rect. 1 3
798 30.12 humidity 50.0 1440 > th dose independent rect. 1 3
807 30.12 atmosphere 995.0 1440 > th dose independent rect. 1 3
809 30.12 radiation 1.0 1440 < th dose independent rect. 1 3
830 30.12 atmosphere 1000.0 90 > th dose independent rect. 3 16
833 30.12 temperature 10.0 1440 > th dose independent rect. 4 21
849 30.12 radiation 1.0 1440 < th dose dependent rect. 1 3
854 30.12 radiation 30.0 43200 < th dose dependent rect. 1 3
867 30.12 wind 9.0 30 < th dose dependent rect. 3 21
873 30.13 radiation 20.0 10 < th dose independent rect. 4 6
874 30.13 atmosphere 995.0 720 > th dose independent rect. 7 8
883 30.13 humidity 50.0 90 > th dose dependent rect. 3 6
896 30.13 wind 3.0 30 < th dose dependent rect. 7 20
918 30.14 atmosphere 995.0 270 > th dose independent rect. 1 22
929 30.14 humidity 60.0 90 > th dose dependent rect. 3 8
934 30.14 wind 9.0 90 < th dose dependent rect. 13 14
935 30.14 temperature 10.0 90 > th dose dependent rect. 7 20
946 30.15 humidity 70.0 90 > th dose independent rect. 3 6
948 30.15 atmosphere 995.0 720 > th dose independent rect. 3 12
963 30.15 temperature 15.0 30 > th dose dependent rect. 3 6