BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0223400 Os11g0223400|AK112108
(406 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0223400 Conserved hypothetical protein 604 e-173
Os01g0621900 Conserved hypothetical protein 152 5e-37
Os06g0523100 Conserved hypothetical protein 145 4e-35
Os04g0640900 Lambda repressor-like, DNA-binding domain cont... 133 2e-31
Os04g0458200 Conserved hypothetical protein 126 3e-29
Os02g0575700 Conserved hypothetical protein 124 2e-28
Os06g0472700 Conserved hypothetical protein 78 1e-14
Os02g0259100 Conserved hypothetical protein 76 4e-14
>Os11g0223400 Conserved hypothetical protein
Length = 406
Score = 604 bits (1558), Expect = e-173, Method: Compositional matrix adjust.
Identities = 334/406 (82%), Positives = 334/406 (82%)
Query: 1 QTESSSLSLLLGVRNPGKCVVDTESNQFPGCIDVSDQKESSSLSLLLGVRNPEKCAVDAE 60
QTESSSLSLLLGVRNPGKCVVDTESNQFPGCIDVSDQKESSSLSLLLGVRNPEKCAVDAE
Sbjct: 1 QTESSSLSLLLGVRNPGKCVVDTESNQFPGCIDVSDQKESSSLSLLLGVRNPEKCAVDAE 60
Query: 61 SSQFPRCVDGSDQKEXXXXXXXXXXXXDASEMLAANTXXXXXXXXXXXXXXXXXXXXXXX 120
SSQFPRCVDGSDQKE DASEMLAANT
Sbjct: 61 SSQFPRCVDGSDQKESSSHSLCASVVSDASEMLAANTVKSSGGSVAGASGSGKCKKQGCE 120
Query: 121 XXXXXXTIFCRAHGGGKRCYYPGCTKSAEEHTDFCLAHISRRCMHEGCFRFARRKTDFCS 180
TIFCRAHGGGKRCYYPGCTKSAEEHTDFCLAHISRRCMHEGCFRFARRKTDFCS
Sbjct: 121 EKAGGKTIFCRAHGGGKRCYYPGCTKSAEEHTDFCLAHISRRCMHEGCFRFARRKTDFCS 180
Query: 181 XXXXXXXXXXXXXXXSSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKM 240
SSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKM
Sbjct: 181 KHGGGKKGETETHKKSSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKM 240
Query: 241 ACSFPGCTKMAWGPSAHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCSWR 300
ACSFPGCTKMAWGPSAHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCSWR
Sbjct: 241 ACSFPGCTKMAWGPSAHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCSWR 300
Query: 301 GGESSVGGGEDKCDRIARGRSGLCAAHSALVLDDRASCDGTIAPAAAQLVQADELIKPDV 360
GGESSVGGGEDKCDRIARGRSGLCAAHSALVLDDRASCDGTIAPAAAQLVQADELIKPDV
Sbjct: 301 GGESSVGGGEDKCDRIARGRSGLCAAHSALVLDDRASCDGTIAPAAAQLVQADELIKPDV 360
Query: 361 IEHPAVEAGRDDKXXXXXXXXXXXXXXXXQRLDLNAEAIITQHFFV 406
IEHPAVEAGRDDK QRLDLNAEAIITQHFFV
Sbjct: 361 IEHPAVEAGRDDKADGGVGGSGSAAAVADQRLDLNAEAIITQHFFV 406
>Os01g0621900 Conserved hypothetical protein
Length = 646
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 138/303 (45%), Gaps = 65/303 (21%)
Query: 127 TIFCRAHGGGKRCYYPGCTKSAEEHTDFCLAHIS-RRCMHEGCFRFARRKTDFCSXXXXX 185
TI+C+AHGGG+RC + GCTKSAE TD C+AH RRC H+GC R AR K+ C
Sbjct: 301 TIYCKAHGGGRRCQFLGCTKSAEGRTDHCIAHGGGRRCSHDGCSRAARGKSGLC---IRH 357
Query: 186 XXXXXXXXXXSSRSAESRSGATITHVSS------------------------GKNCKSPG 221
RSAE SG I+H GK C G
Sbjct: 358 GGGKRCQKENCIRSAEGHSGFCISHGGGRRCQFPECTKGAQGSTKFCKAHGGGKRCTFSG 417
Query: 222 CTGTADGVTMLCEKHRMKMACSF----------------------------PGCTKMAWG 253
C A+G T+ C+ H C F GCTK A G
Sbjct: 418 CNKGAEGSTLFCKGHGGGKRCLFQGGGVCPKSVHGGTQYCVAHGGGKRCAISGCTKSARG 477
Query: 254 PSAHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCSWRGGESSVGGGEDKC 313
+ +CVRHG GKRCKF GC KS + STDFCK HGG CSW + + G G +C
Sbjct: 478 RTEYCVRHGGGKRCKFEGCAKSAQGSTDFCKAHGGG-----KRCSWGQVDLNFGVGAPQC 532
Query: 314 DRIARGRSGLCAAHSALVLDDRASCDGTIAPAAAQL---VQADELIKPDVIEHPAVEAGR 370
D+ AR ++GLC+AH ALV D GT+ A Q + DE+ V P +A
Sbjct: 533 DKFARSKTGLCSAHCALV-QDHCVRGGTLGAATFQFATDAKFDEMEVTPVKGDPHAQASS 591
Query: 371 DDK 373
DD+
Sbjct: 592 DDQ 594
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 86/199 (43%), Gaps = 46/199 (23%)
Query: 130 CRAHGGGKRCYYPGCTKSAEEHTDFCLAHIS-RRCMHEGCFRFARRKTDFCSXXXXXXXX 188
C AHGGG+RC PGC K AE T +C AH RRC GC + A +TD C
Sbjct: 279 CIAHGGGRRCQKPGCQKGAEGRTIYCKAHGGGRRCQFLGCTKSAEGRTDHC--------- 329
Query: 189 XXXXXXXSSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKMACSFPGCT 248
I H G+ C GC+ A G + LC +H C C
Sbjct: 330 -------------------IAH-GGGRRCSHDGCSRAARGKSGLCIRHGGGKRCQKENCI 369
Query: 249 KMAWGPSAHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCSWRGGESSVGG 308
+ A G S C+ HG G+RC+F CTK + ST FCK HGG C++ G
Sbjct: 370 RSAEGHSGFCISHGGGRRCQFPECTKGAQGSTKFCKAHGGG-----KRCTFSG------- 417
Query: 309 GEDKCDRIARGRSGLCAAH 327
C++ A G + C H
Sbjct: 418 ----CNKGAEGSTLFCKGH 432
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 56/113 (49%), Gaps = 16/113 (14%)
Query: 215 KNCKSPGCTGTADGVTMLCEKHRMKMACSFPGCTKMAWGPSAHCVRHGAGKRCKFLGCTK 274
KNC+ PGC A G + C H C PGC K A G + +C HG G+RC+FLGCTK
Sbjct: 261 KNCQFPGCVKGARGASGHCIAHGGGRRCQKPGCQKGAEGRTIYCKAHGGGRRCQFLGCTK 320
Query: 275 STRRSTDFCKTHGGSGGADDTLCSWRGGESSVGGGEDKCDRIARGRSGLCAAH 327
S TD C HGG CS D C R ARG+SGLC H
Sbjct: 321 SAEGRTDHCIAHGGG-----RRCS-----------HDGCSRAARGKSGLCIRH 357
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 69/169 (40%), Gaps = 45/169 (26%)
Query: 159 ISRRCMHEGCFRFARRKTDFCSXXXXXXXXXXXXXXXSSRSAESRSGATITHVSSGKNCK 218
I++ C GC + AR + C I H G+ C+
Sbjct: 259 ITKNCQFPGCVKGARGASGHC----------------------------IAH-GGGRRCQ 289
Query: 219 SPGCTGTADGVTMLCEKHRMKMACSFPGCTKMAWGPSAHCVRHGAGKRCKFLGCTKSTRR 278
PGC A+G T+ C+ H C F GCTK A G + HC+ HG G+RC GC+++ R
Sbjct: 290 KPGCQKGAEGRTIYCKAHGGGRRCQFLGCTKSAEGRTDHCIAHGGGRRCSHDGCSRAARG 349
Query: 279 STDFCKTHGGSGGADDTLCSWRGGESSVGGGEDKCDRIARGRSGLCAAH 327
+ C HGG C ++ C R A G SG C +H
Sbjct: 350 KSGLCIRHGGG-----KRCQ-----------KENCIRSAEGHSGFCISH 382
>Os06g0523100 Conserved hypothetical protein
Length = 463
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 127/270 (47%), Gaps = 58/270 (21%)
Query: 127 TIFCRAHGGGKRCYYPGCTKSAEEHTDFCLAHIS-RRCMHEGCFRFARRKTDFCSXXXXX 185
TIFC+AHGGG+RC + GCTKSAE TDFC+AH RRC +GC + AR K+ C
Sbjct: 122 TIFCKAHGGGRRCEHLGCTKSAEGRTDFCIAHGGGRRCSRDGCRKAARGKSGLC---IKH 178
Query: 186 XXXXXXXXXXSSRSAESRSGATITHVSS------------------------GKNCKSPG 221
++SAE +SG I H GK C P
Sbjct: 179 GGGKRCQKLNCTKSAEGQSGFCIAHGGGRRCKHDGCTKGAQGSTNFCKAHGGGKRCTHPN 238
Query: 222 CTGTADGVTMLCEKHRMKMACS-------------------------FPGCTKMAWGPSA 256
C+ A+G T LC+ H CS PGCTK A G +
Sbjct: 239 CSKGAEGSTALCKAHGGGKRCSAEGCPKSVHGGTEFCVAHGGGKRCVVPGCTKSARGRTD 298
Query: 257 HCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCSWRGGESSVGGGEDKCDRI 316
CVRHG GKRC+F GC+KS + STDFCK HGG C W S +G G C+R
Sbjct: 299 CCVRHGGGKRCQFTGCSKSAQGSTDFCKAHGGG-----KRCLWGQSGSGLGDGSGTCERF 353
Query: 317 ARGRSGLCAAHSALVLDDRASCDGTIAPAA 346
ARG+ GLC AH+ALV D R T+ A
Sbjct: 354 ARGKKGLCVAHNALVEDSRVRGGQTVGTIA 383
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 94/209 (44%), Gaps = 41/209 (19%)
Query: 130 CRAHGGGKRCYYPGCTKSAEEHTDFCLAHIS-RRCMHEGCFRFARRKTDFCSXXXXXXXX 188
C AHGGG+RC GC K AE T FC AH RRC H GC + A +TDFC
Sbjct: 100 CIAHGGGRRCQREGCKKGAEGKTIFCKAHGGGRRCEHLGCTKSAEGRTDFC--------- 150
Query: 189 XXXXXXXSSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKMACSFPGCT 248
I H G+ C GC A G + LC KH C CT
Sbjct: 151 -------------------IAH-GGGRRCSRDGCRKAARGKSGLCIKHGGGKRCQKLNCT 190
Query: 249 KMAWGPSAHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCSWRGGESSV-- 306
K A G S C+ HG G+RCK GCTK + ST+FCK HGG CS +G E S
Sbjct: 191 KSAEGQSGFCIAHGGGRRCKHDGCTKGAQGSTNFCKAHGGGKRCTHPNCS-KGAEGSTAL 249
Query: 307 ----GGGE----DKCDRIARGRSGLCAAH 327
GGG+ + C + G + C AH
Sbjct: 250 CKAHGGGKRCSAEGCPKSVHGGTEFCVAH 278
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 54/116 (46%), Gaps = 16/116 (13%)
Query: 212 SSGKNCKSPGCTGTADGVTMLCEKHRMKMACSFPGCTKMAWGPSAHCVRHGAGKRCKFLG 271
+S K C PGC A G + C H C GC K A G + C HG G+RC+ LG
Sbjct: 79 NSTKICSQPGCAKGARGSSGRCIAHGGGRRCQREGCKKGAEGKTIFCKAHGGGRRCEHLG 138
Query: 272 CTKSTRRSTDFCKTHGGSGGADDTLCSWRGGESSVGGGEDKCDRIARGRSGLCAAH 327
CTKS TDFC HGG CS D C + ARG+SGLC H
Sbjct: 139 CTKSAEGRTDFCIAHGGG-----RRCS-----------RDGCRKAARGKSGLCIKH 178
>Os04g0640900 Lambda repressor-like, DNA-binding domain containing protein
Length = 637
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 116/259 (44%), Gaps = 73/259 (28%)
Query: 127 TIFCRAHGGGKRCYYPGCTKSAEEHTDFCLAH-ISRRCMHEGCFRFARRKTDFCSXXXXX 185
T +C++HGGGKRC GCTKSAE T+FC+AH RRC GC + AR ++ FC
Sbjct: 274 TAYCKSHGGGKRCQELGCTKSAEGKTEFCIAHGGGRRCGTPGCTKAARGRSGFC---IKH 330
Query: 186 XXXXXXXXXXSSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKMACSF- 244
SRSAE + G I+H G+ C+ P C+ A G TM C+ H C F
Sbjct: 331 GGGKRCRVEGCSRSAEGQFGLCISH-GGGRRCQYPNCSKGAQGGTMFCKSHGGGKRCIFE 389
Query: 245 ----------------------------------------------------PGCTKMAW 252
PGCTK A
Sbjct: 390 GCTKGAEGNTLLCKGHGGGKRCLFEGGGVCPKSVHGGTSFCVAHGGGKRCSVPGCTKSAR 449
Query: 253 GPSAHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCSWRGGESSVGGGEDK 312
G + CVRHG GKRCK GC KS + STDFCK HGG C+W G
Sbjct: 450 GRTDCCVRHGGGKRCKVDGCDKSAQGSTDFCKAHGGG-----KRCAWSTG---------- 494
Query: 313 CDRIARGRSGLCAAHSALV 331
C+R ARGRSGLCAAH L+
Sbjct: 495 CERFARGRSGLCAAHGTLM 513
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 90/201 (44%), Gaps = 39/201 (19%)
Query: 137 KRCYYPGCTKSAEEHTDFCLAHIS-RRCMHEGCFRFARRKTDFCSXXXXXXXXXXXXXXX 195
K+C + GC+K A T C++H +RC GC + A +T +C
Sbjct: 234 KKCRFNGCSKGARGATGLCISHGGGQRCQKPGCNKGAESRTAYC---------------- 277
Query: 196 SSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKMACSFPGCTKMAWGPS 255
+S G GK C+ GCT +A+G T C H C PGCTK A G S
Sbjct: 278 -----KSHGG--------GKRCQELGCTKSAEGKTEFCIAHGGGRRCGTPGCTKAARGRS 324
Query: 256 AHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCS--WRGGE---SSVGGGE 310
C++HG GKRC+ GC++S C +HGG CS +GG S GGG+
Sbjct: 325 GFCIKHGGGKRCRVEGCSRSAEGQFGLCISHGGGRRCQYPNCSKGAQGGTMFCKSHGGGK 384
Query: 311 ----DKCDRIARGRSGLCAAH 327
+ C + A G + LC H
Sbjct: 385 RCIFEGCTKGAEGNTLLCKGH 405
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 196 SSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKMACSFPGCTKMAWGPS 255
SS S E RS H K C+ GC+ A G T LC H C PGC K A +
Sbjct: 220 SSTSTEQRS-----HQRHPKKCRFNGCSKGARGATGLCISHGGGQRCQKPGCNKGAESRT 274
Query: 256 AHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCSWRGGESSVGGGEDKCDR 315
A+C HG GKRC+ LGCTKS T+FC HGG C G C +
Sbjct: 275 AYCKSHGGGKRCQELGCTKSAEGKTEFCIAHGGG-----RRC-----------GTPGCTK 318
Query: 316 IARGRSGLCAAH 327
ARGRSG C H
Sbjct: 319 AARGRSGFCIKH 330
>Os04g0458200 Conserved hypothetical protein
Length = 631
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 113/245 (46%), Gaps = 45/245 (18%)
Query: 127 TIFCRAHGGGKRCYYPGCTKSAEEHTDFCLAH-ISRRCMHEGCFRFARRKTDFCSXXXXX 185
T +C+AHGGG+RC GCTKSAE TD+C+AH RRC H+GC + AR K+ C
Sbjct: 277 TAYCKAHGGGRRCEELGCTKSAEGKTDYCIAHGGGRRCEHDGCPKAARGKSGRC---IKH 333
Query: 186 XXXXXXXXXXSSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKMACSFP 245
RSAE ++G I+H G+ C+ P C+ A G T+ C+ H C F
Sbjct: 334 GGGKRCTVQGCIRSAEGKAGLCISH-GGGRRCQFPDCSKGAQGSTLYCKGHGGGKRCIFD 392
Query: 246 GCTKMAWGPSA----------------------------HCVRHGAGKRCKFLGCTKSTR 277
GC+K A G + +CV HG GKRC GCTKS R
Sbjct: 393 GCSKGAEGSTPLCKAHGGGKRCMFEGGGVCPKSVHGGTEYCVAHGGGKRCSVAGCTKSAR 452
Query: 278 RSTDFCKTHGG-----------SGGADDTLCSWRGGESSVGGGEDKCDRIARGRSGLCAA 326
TD C HGG S C GG G C++ ARGRSGLCAA
Sbjct: 453 GRTDCCVKHGGGKRCKVDNCSKSAQGSTDFCKAHGGGKRCTWGTG-CEKFARGRSGLCAA 511
Query: 327 HSALV 331
H L
Sbjct: 512 HGTLA 516
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 100/217 (46%), Gaps = 27/217 (12%)
Query: 129 FCRAHGGGKRCYYPGCTKSAEEHTDFCLAHIS-RRCMHEGCFRFARRKTDFCSXXXXXXX 187
C AHGGG+RC+ PGC K AE T +C AH RRC GC + A KTD+C
Sbjct: 254 LCIAHGGGQRCHKPGCHKGAESSTAYCKAHGGGRRCEELGCTKSAEGKTDYC---IAHGG 310
Query: 188 XXXXXXXXSSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKMACSFPGC 247
++A +SG I H GK C GC +A+G LC H C FP C
Sbjct: 311 GRRCEHDGCPKAARGKSGRCIKH-GGGKRCTVQGCIRSAEGKAGLCISHGGGRRCQFPDC 369
Query: 248 TKMAWGPSAHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCSWRGG---ES 304
+K A G + +C HG GKRC F GC+K ST CK HGG C + GG
Sbjct: 370 SKGAQGSTLYCKGHGGGKRCIFDGCSKGAEGSTPLCKAHGGG-----KRCMFEGGGVCPK 424
Query: 305 SVGGGEDK--------------CDRIARGRSGLCAAH 327
SV GG + C + ARGR+ C H
Sbjct: 425 SVHGGTEYCVAHGGGKRCSVAGCTKSARGRTDCCVKH 461
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 55/119 (46%), Gaps = 16/119 (13%)
Query: 209 THVSSGKNCKSPGCTGTADGVTMLCEKHRMKMACSFPGCTKMAWGPSAHCVRHGAGKRCK 268
H K C+ GC+ A G + LC H C PGC K A +A+C HG G+RC+
Sbjct: 231 NHPRHPKKCRFKGCSKGARGASGLCIAHGGGQRCHKPGCHKGAESSTAYCKAHGGGRRCE 290
Query: 269 FLGCTKSTRRSTDFCKTHGGSGGADDTLCSWRGGESSVGGGEDKCDRIARGRSGLCAAH 327
LGCTKS TD+C HGG + D C + ARG+SG C H
Sbjct: 291 ELGCTKSAEGKTDYCIAHGGGRRCE----------------HDGCPKAARGKSGRCIKH 333
>Os02g0575700 Conserved hypothetical protein
Length = 655
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 113/259 (43%), Gaps = 73/259 (28%)
Query: 127 TIFCRAHGGGKRCYYPGCTKSAEEHTDFCLAH-ISRRCMHEGCFRFARRKTDFCSXXXXX 185
T +C+AHGGG+RC GCTKSAE TD C+AH RRC H+GC + AR K+ C
Sbjct: 302 TAYCKAHGGGRRCMQLGCTKSAEGKTDHCIAHGGGRRCGHQGCPKAARGKSGRC---IKH 358
Query: 186 XXXXXXXXXXSSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKMACSF- 244
RSAE R G I+H G+ C+ P C A G T+ C+ H C F
Sbjct: 359 GGGKRCSVEGCIRSAEGRVGLCISH-GGGRRCQYPDCRKGAQGSTLYCKAHGGGKRCVFD 417
Query: 245 ----------------------------------------------------PGCTKMAW 252
PGC K A
Sbjct: 418 GCLKGAEGSTPLCKAHGGGKRCMFEGGGLCPKSVHGGTSFCVAHGGGKRCTVPGCGKSAR 477
Query: 253 GPSAHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCSWRGGESSVGGGEDK 312
G + CV+HG GKRC+ GC KS + ST+FCK HGG C+W G
Sbjct: 478 GRTDCCVKHGGGKRCRVDGCAKSAQGSTEFCKAHGGG-----KRCTWATG---------- 522
Query: 313 CDRIARGRSGLCAAHSALV 331
C++ ARGRSGLCAAH L+
Sbjct: 523 CEKFARGRSGLCAAHGTLM 541
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 129 FCRAHGGGKRCYYPGCTKSAEEHTDFCLAHIS-RRCMHEGCFRFARRKTDFCSXXXXXXX 187
C AHGGG+RC PGC K AE T +C AH RRCM GC + A KTD C
Sbjct: 279 LCIAHGGGQRCQKPGCHKGAESRTAYCKAHGGGRRCMQLGCTKSAEGKTDHC---IAHGG 335
Query: 188 XXXXXXXXSSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKMACSFPGC 247
++A +SG I H GK C GC +A+G LC H C +P C
Sbjct: 336 GRRCGHQGCPKAARGKSGRCIKH-GGGKRCSVEGCIRSAEGRVGLCISHGGGRRCQYPDC 394
Query: 248 TKMAWGPSAHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGS------GGADDTLC--SW 299
K A G + +C HG GKRC F GC K ST CK HGG GG LC S
Sbjct: 395 RKGAQGSTLYCKAHGGGKRCVFDGCLKGAEGSTPLCKAHGGGKRCMFEGGG---LCPKSV 451
Query: 300 RGGES---SVGGGE----DKCDRIARGRSGLCAAH 327
GG S + GGG+ C + ARGR+ C H
Sbjct: 452 HGGTSFCVAHGGGKRCTVPGCGKSARGRTDCCVKH 486
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 61/135 (45%), Gaps = 19/135 (14%)
Query: 215 KNCKSPGCTGTADGVTMLCEKHRMKMACSFPGCTKMAWGPSAHCVRHGAGKRCKFLGCTK 274
K C+ GC+ A G + LC H C PGC K A +A+C HG G+RC LGCTK
Sbjct: 262 KKCRFKGCSKGARGASGLCIAHGGGQRCQKPGCHKGAESRTAYCKAHGGGRRCMQLGCTK 321
Query: 275 STRRSTDFCKTHGGSGGADDTLCSWRGGESSVGGGEDKCDRIARGRSGLCAAHSALVLDD 334
S TD C HGG C +G C + ARG+SG C H
Sbjct: 322 SAEGKTDHCIAHGGG-----RRCGHQG-----------CPKAARGKSGRCIKHGG---GK 362
Query: 335 RASCDGTIAPAAAQL 349
R S +G I A ++
Sbjct: 363 RCSVEGCIRSAEGRV 377
>Os06g0472700 Conserved hypothetical protein
Length = 379
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 71/161 (44%), Gaps = 27/161 (16%)
Query: 128 IFCRAH-GGGKRCYYPGCTKSAEEHTDFCLAHIS-RRCMHEGCFRFARRKTDFCSXXXXX 185
++C+ H GG K C GCTK A T C+AH +RC GC A C
Sbjct: 154 MYCKIHRGGSKGCMVQGCTKGAHGGTPLCIAHGGGKRCAVTGCPNAA------CG----- 202
Query: 186 XXXXXXXXXXSSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKMACSFP 245
S++ + + H G+ C+ GC A G T C H C F
Sbjct: 203 -------------SSQGLTDRCVRH-GGGRRCRFDGCVKGAQGNTDFCIGHGGGRRCKFE 248
Query: 246 GCTKMAWGPSAHCVRHGAGKRCKFLGCTKSTRRSTDFCKTH 286
GC K A G S +C++HG G+RCKF GC S + DFC H
Sbjct: 249 GCGKSAQGRSDYCIKHGGGRRCKFQGCATSAKWGMDFCSLH 289
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 78/181 (43%), Gaps = 40/181 (22%)
Query: 139 CYYPGCTKSAEEHTDFCLAHI--SRRCMHEGCFRFARRKTDFCSXXXXXXXXXXXXXXXS 196
C Y GC+K A+ + +C H S+ CM +GC + A T C
Sbjct: 140 CKYQGCSKRAQGNAMYCKIHRGGSKGCMVQGCTKGAHGGTPLC----------------- 182
Query: 197 SRSAESRSGATITHVSSGKNCKSPGCT----GTADGVTMLCEKHRMKMACSFPGCTKMAW 252
I H GK C GC G++ G+T C +H C F GC K A
Sbjct: 183 -----------IAH-GGGKRCAVTGCPNAACGSSQGLTDRCVRHGGGRRCRFDGCVKGAQ 230
Query: 253 GPSAHCVRHGAGKRCKFLGCTKSTRRSTDFCKTHGGSGGADDTLCSWRGGESSVGGGEDK 312
G + C+ HG G+RCKF GC KS + +D+C HGG C ++G +S G D
Sbjct: 231 GNTDFCIGHGGGRRCKFEGCGKSAQGRSDYCIKHGGG-----RRCKFQGCATSAKWGMDF 285
Query: 313 C 313
C
Sbjct: 286 C 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 86/228 (37%), Gaps = 43/228 (18%)
Query: 127 TIFCRAHGGGKRCYYPGCTKSAEEHTDFCLAH--------------------ISRRCMHE 166
T+ C++H G+RC GC + + C++H IS + E
Sbjct: 53 TLLCKSHSIGQRCQMLGCPHIVPDGSVLCMSHGGGRPLGEPGSSTVACSKSEISIKYEGE 112
Query: 167 GCFRFARRK-TDFCSXXXXXXXXXXXXXXXSSRSAESRSGATITHVSSG--KNCKSPGCT 223
FR + D S S ++ A + G K C GCT
Sbjct: 113 SGFRVTQNAGNDLGSAGIYNPDGDVVMCKYQGCSKRAQGNAMYCKIHRGGSKGCMVQGCT 172
Query: 224 GTADGVTMLCEKHRMKMACSFPGCTKMAWGPSA----HCVRHGAGKRCKFLGCTKSTRRS 279
A G T LC H C+ GC A G S CVRHG G+RC+F GC K + +
Sbjct: 173 KGAHGGTPLCIAHGGGKRCAVTGCPNAACGSSQGLTDRCVRHGGGRRCRFDGCVKGAQGN 232
Query: 280 TDFCKTHGGSGGADDTLCSWRGGESSVGGGEDKCDRIARGRSGLCAAH 327
TDFC HGG C + G C + A+GRS C H
Sbjct: 233 TDFCIGHGGG-----RRCKFEG-----------CGKSAQGRSDYCIKH 264
>Os02g0259100 Conserved hypothetical protein
Length = 357
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 137 KRCYYPGCTKSAEEHTDFCLAHIS-RRCMHEGCFRFARRKTDFCSXXXXXXXXXXXXXXX 195
K C YPGC K A + C+AH RRC +GC + A KT FC
Sbjct: 242 KNCTYPGCMKGARGSSGRCIAHGGGRRCQKDGCDKGAEGKTIFCKAH------------- 288
Query: 196 SSRSAESRSGATITHVSSGKNCKSPGCTGTADGVTMLCEKHRMKMACSFPGCTKMAWGPS 255
G+ C+ GCT +A+G T C H CS GC + A G S
Sbjct: 289 ----------------GGGRRCEHLGCTKSAEGRTDFCIAHGGGRRCSHEGCKRAARGKS 332
Query: 256 AHCVRHGAGKRCKFLGCTKSTRR 278
C++HG GKRC+ GCTK +R
Sbjct: 333 GRCIKHGGGKRCQHAGCTKKCKR 355
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 54/116 (46%), Gaps = 16/116 (13%)
Query: 212 SSGKNCKSPGCTGTADGVTMLCEKHRMKMACSFPGCTKMAWGPSAHCVRHGAGKRCKFLG 271
SS KNC PGC A G + C H C GC K A G + C HG G+RC+ LG
Sbjct: 239 SSTKNCTYPGCMKGARGSSGRCIAHGGGRRCQKDGCDKGAEGKTIFCKAHGGGRRCEHLG 298
Query: 272 CTKSTRRSTDFCKTHGGSGGADDTLCSWRGGESSVGGGEDKCDRIARGRSGLCAAH 327
CTKS TDFC HGG CS G C R ARG+SG C H
Sbjct: 299 CTKSAEGRTDFCIAHGGG-----RRCSHEG-----------CKRAARGKSGRCIKH 338
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 127 TIFCRAHGGGKRCYYPGCTKSAEEHTDFCLAH-ISRRCMHEGCFRFARRKTDFC 179
TIFC+AHGGG+RC + GCTKSAE TDFC+AH RRC HEGC R AR K+ C
Sbjct: 282 TIFCKAHGGGRRCEHLGCTKSAEGRTDFCIAHGGGRRCSHEGCKRAARGKSGRC 335
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.132 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,071,174
Number of extensions: 562334
Number of successful extensions: 1881
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1665
Number of HSP's successfully gapped: 36
Length of query: 406
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 303
Effective length of database: 11,657,759
Effective search space: 3532300977
Effective search space used: 3532300977
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)