Os11g0223400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0223400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.46 | 0.419 | 8.49 | 3.85 | 0.222 | 0.737 | 0.803 | -2.91 | 1.26 | 2.07 | 25.38 | 264 | -- | -- |
| 87.18 | 0.435 | 8.52 | 3.46 | 0.203 | 1.45 | 0.265 | -- | 1.11 | 1.35 | 21.38 | 270 | -- | -- |
| 80.79 | 0.419 | 8.5 | 3.82 | 0.334 | 0.596 | -- | -2.91 | 1.2 | 1.66 | 24.48 | 573 | -- | -- |
| 86.35 | 0.433 | 8.56 | 3.42 | 0.234 | 1.56 | -- | -- | 1.08 | 2.32 | 21.04 | 242 | -- | -- |
| 83.72 | 0.426 | 8.47 | 3.85 | -- | 0.863 | -- | -2.9 | 1.32 | -- | 27.89 | 245 | -- | -- |
| 104.08 | 0.478 | 8.59 | 3.1 | 0.329 | -- | 0.144 | -- | 0.953 | 2.57 | -- | -- | -- | -- |
| 104.15 | 0.478 | 8.59 | 3.1 | 0.33 | -- | -- | -- | 0.952 | 2.67 | -- | -- | -- | -- |
| 89.37 | 0.44 | 8.56 | 3.43 | -- | 1.62 | -- | -- | 1.1 | -- | 21.23 | 227 | -- | -- |
| 174.17 | 0.615 | 8.82 | -- | 0.297 | -2.23 | -- | -- | -0.065 | 3.67 | 127.3 | 47520 | -- | -- |
| 110.51 | 0.491 | 8.59 | 3.11 | -- | -- | -- | -- | 0.961 | -- | -- | -- | -- | -- |
| 357.47 | 0.884 | 8.67 | -- | 0.391 | -- | -- | -- | 0.607 | 2.76 | -- | -- | -- | -- |
| 179.06 | 0.623 | 8.81 | -- | -- | -2.2 | -- | -- | -0.0436 | -- | 135.6 | 47520 | -- | -- |
| 366.35 | 0.893 | 8.66 | -- | -- | -- | -- | -- | 0.615 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.15 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 13 |
| 7 | 74.35 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 27 | 74.57 | humidity | 90 | 14400 | > th | dose dependent | sin | 7 | NA |
| 40 | 74.78 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 53 | 74.98 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 59 | 75.01 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 66 | 75.09 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 72 | 75.18 | humidity | 90 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 81 | 75.28 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 88 | 75.34 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 90 | 75.35 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 10 |
| 108 | 75.48 | radiation | 1 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 109 | 75.48 | radiation | 1 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 118 | 75.51 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 120 | 75.51 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 13 |
| 124 | 75.54 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 6 |
| 126 | 75.56 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 6 |
| 138 | 75.61 | humidity | 90 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 139 | 75.64 | humidity | 90 | 14400 | > th | dose independent | sin | 10 | NA |
| 142 | 75.65 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 155 | 75.71 | radiation | 1 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 160 | 75.76 | radiation | 1 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 168 | 75.79 | humidity | 90 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 174 | 75.81 | radiation | 1 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 177 | 75.81 | wind | 7 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 183 | 75.83 | radiation | 1 | 43200 | < th | dose dependent | rect. | 5 | 12 |
| 201 | 75.95 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 16 |
| 214 | 76.00 | humidity | 80 | 43200 | < th | dose independent | sin | 7 | NA |
| 216 | 76.00 | humidity | 90 | 43200 | > th | dose dependent | rect. | 11 | 4 |
| 228 | 76.04 | radiation | 1 | 43200 | < th | dose dependent | rect. | 23 | 18 |
| 244 | 76.07 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 249 | 76.08 | humidity | 90 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 255 | 76.10 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 262 | 76.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 267 | 76.12 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 269 | 76.13 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 273 | 76.13 | humidity | 90 | 43200 | < th | dose dependent | rect. | 22 | 14 |
| 288 | 76.17 | humidity | 50 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 303 | 76.21 | wind | 3 | 43200 | > th | dose independent | rect. | 13 | 9 |
| 306 | 76.22 | radiation | 1 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 326 | 76.26 | wind | 1 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 329 | 76.27 | humidity | 50 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 333 | 76.28 | humidity | 50 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 334 | 76.28 | wind | 3 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 338 | 76.30 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 372 | 76.36 | humidity | 50 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 374 | 76.36 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 375 | 76.36 | wind | 5 | 43200 | < th | dose dependent | rect. | 14 | 7 |
| 381 | 76.38 | wind | 1 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 388 | 76.39 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 397 | 76.41 | radiation | 1 | 43200 | < th | dose dependent | sin | 4 | NA |
| 400 | 76.41 | radiation | 1 | 43200 | < th | dose dependent | rect. | 20 | 16 |
| 408 | 76.42 | radiation | 1 | 43200 | < th | dose dependent | rect. | 23 | 13 |
| 426 | 76.45 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 8 |
| 451 | 76.48 | wind | 3 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 453 | 76.48 | humidity | 90 | 43200 | < th | dose dependent | sin | 7 | NA |
| 465 | 76.50 | humidity | 90 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 482 | 76.52 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 511 | 76.56 | wind | 3 | 43200 | > th | dose independent | rect. | 12 | 5 |
| 512 | 76.56 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 539 | 76.61 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 542 | 76.62 | wind | 1 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 544 | 76.62 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 546 | 76.62 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 570 | 76.67 | humidity | 50 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 618 | 76.74 | temperature | 20 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 632 | 76.76 | wind | 5 | 43200 | < th | dose dependent | rect. | 14 | 11 |
| 656 | 76.80 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 680 | 76.83 | radiation | 1 | 43200 | < th | dose independent | rect. | 1 | 15 |
| 689 | 76.84 | wind | 3 | 43200 | < th | dose independent | rect. | 12 | 5 |
| 735 | 76.87 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 783 | 76.92 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 793 | 76.93 | temperature | 30 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 807 | 76.95 | wind | 3 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 811 | 76.95 | temperature | 10 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 847 | 76.97 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 859 | 76.98 | humidity | 50 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 860 | 76.98 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 869 | 76.99 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 882 | 76.99 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 915 | 77.03 | temperature | 20 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 935 | 77.04 | temperature | 20 | 43200 | > th | dose independent | rect. | 4 | 14 |
| 953 | 77.06 | radiation | 30 | 43200 | < th | dose independent | rect. | 5 | 2 |