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Os06g0472700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.88 (0.0156) R2 : 0.000627
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0176 (0.0329) R2dN8 : 0.000809 R2N8 : 0.000627
σ : 0.294
deviance : 39.7
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
17.2 0.195 9.9 0.254 0.363 -0.451 0.493 0.523 -0.0365 16.2 29.7 7 -- --
17.44 0.194 9.9 0.337 0.364 -0.466 0.336 -- -0.0191 16.3 28.5 6 -- --
17.74 0.196 9.9 0.284 0.363 -0.46 -- 0.285 -0.0197 16.2 29.85 2 -- --
17.75 0.196 9.89 0.342 0.363 -0.467 -- -- -0.0163 16.2 28.64 6 -- --
22.98 0.223 9.91 0.261 -- -0.753 -- 0.0994 -0.0637 -- 30.1 2 -- --
20.45 0.212 9.87 0.449 0.498 -- 0.358 -- 0.0769 15.6 -- -- -- --
20.84 0.214 9.87 0.454 0.5 -- -- -- 0.079 15.6 -- -- -- --
22.92 0.223 9.9 0.263 -- -0.761 -- -- -0.0763 -- 30 2 -- --
20.59 0.213 9.91 -- 0.321 -0.602 -- -- -0.0788 16.5 28.64 6 -- --
34.74 0.275 9.87 0.433 -- -- -- -- 0.0657 -- -- -- -- --
26.28 0.24 9.88 -- 0.491 -- -- -- 0.0284 15.6 -- -- -- --
24.49 0.23 9.91 -- -- -0.84 -- -- -0.123 -- 29.7 26 -- --
39.7 0.294 9.88 -- -- -- -- -- 0.0176 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 14.53 temperature 10.0 90 > th dose dependent rect. 6 21
3 14.74 temperature 10.0 10 > th dose dependent rect. 6 22
23 15.24 temperature 20.0 270 > th dose independent rect. 5 20
39 15.58 temperature 20.0 10 > th dose independent rect. 6 22
67 16.05 temperature 30.0 10 < th dose dependent rect. 2 19
91 16.21 temperature 10.0 270 > th dose dependent rect. 20 14
100 16.24 temperature 30.0 90 < th dose dependent rect. 15 15
104 16.25 temperature 30.0 90 < th dose dependent rect. 13 17
106 16.26 temperature 30.0 270 < th dose dependent rect. 1 4
109 16.27 temperature 30.0 10 < th dose dependent rect. 2 21
117 16.32 temperature 30.0 10 < th dose dependent rect. 14 17
118 16.32 temperature 30.0 90 < th dose dependent rect. 1 22
132 16.37 temperature 30.0 10 < th dose dependent rect. 12 19
133 16.38 temperature 20.0 270 > th dose independent rect. 19 15
135 16.40 wind 1.0 43200 > th dose dependent rect. 1 1
140 16.41 temperature 30.0 90 < th dose dependent rect. 11 20
142 16.42 radiation 20.0 14400 < th dose independent rect. 3 3
162 16.46 temperature 30.0 90 < th dose dependent rect. 3 3
172 16.50 wind 9.0 43200 < th dose dependent rect. 1 2
177 16.52 wind 7.0 90 < th dose independent rect. 6 21
180 16.53 wind 1.0 270 > th dose independent rect. 1 3
207 16.60 temperature 30.0 270 < th dose independent rect. 14 15
208 16.60 temperature 30.0 270 < th dose dependent rect. 2 1
222 16.64 precipitation 0.1 90 < th dose independent rect. 6 21
225 16.64 precipitation 0.1 90 < th dose dependent rect. 6 21
229 16.65 radiation 1.0 270 < th dose dependent rect. 1 17
231 16.66 wind 9.0 43200 < th dose dependent rect. 4 2
232 16.66 wind 1.0 43200 > th dose dependent rect. 23 7
237 16.69 wind 9.0 43200 < th dose dependent rect. 23 7
241 16.70 wind 5.0 90 < th dose independent rect. 3 3
242 16.70 humidity 50.0 270 > th dose independent rect. 15 14
244 16.70 wind 1.0 43200 > th dose dependent rect. 4 2
246 16.70 wind 9.0 90 < th dose dependent rect. 6 20
247 16.71 wind 5.0 270 < th dose independent rect. 1 4
250 16.71 wind 1.0 43200 > th dose dependent rect. 1 5
252 16.71 temperature 10.0 270 > th dose dependent rect. 17 8
258 16.72 atmosphere 995.0 90 > th dose dependent rect. 2 4
272 16.74 wind 9.0 43200 < th dose dependent rect. 1 5
314 16.78 radiation 1.0 270 < th dose dependent rect. 23 22
323 16.79 temperature 30.0 10 < th dose dependent rect. 24 23
324 16.80 humidity 50.0 14400 > th dose independent rect. 3 6
340 16.82 wind 5.0 270 < th dose independent rect. 2 1
348 16.83 precipitation 0.1 90 < th dose independent rect. 3 3
350 16.83 precipitation 0.1 90 < th dose dependent rect. 3 3
373 16.85 humidity 90.0 14400 > th dose dependent rect. 2 15
391 16.87 precipitation 0.1 14400 > th dose independent rect. 9 1
393 16.87 precipitation 0.1 14400 > th dose dependent rect. 9 1
394 16.87 wind 9.0 90 < th dose dependent rect. 3 3
403 16.87 temperature 30.0 90 < th dose dependent rect. 9 22
416 16.89 precipitation 0.1 14400 < th dose independent rect. 6 2
418 16.89 precipitation 0.1 270 < th dose independent rect. 1 4
420 16.89 radiation 1.0 270 < th dose independent rect. 1 17
421 16.89 wind 7.0 10 < th dose independent rect. 7 19
424 16.89 precipitation 0.1 14400 < th dose dependent rect. 6 2
427 16.89 precipitation 0.1 270 < th dose dependent rect. 1 4
451 16.91 temperature 25.0 90 < th dose independent rect. 2 19
462 16.92 temperature 10.0 90 > th dose independent rect. 3 3
464 16.92 temperature 30.0 90 < th dose independent rect. 3 3
465 16.92 humidity 50.0 90 > th dose independent rect. 3 3
468 16.92 atmosphere 995.0 90 > th dose independent rect. 3 3
469 16.92 atmosphere 1010.0 90 < th dose independent rect. 3 3
471 16.92 radiation 20.0 90 < th dose independent rect. 3 3
474 16.92 wind 9.0 14400 < th dose independent rect. 5 6
475 16.92 wind 9.0 14400 < th dose independent rect. 4 8
479 16.92 precipitation 0.1 270 < th dose independent rect. 4 22
487 16.92 precipitation 0.1 270 < th dose dependent rect. 4 22
505 16.94 wind 9.0 14400 < th dose independent rect. 21 16
511 16.94 radiation 1.0 270 < th dose dependent rect. 1 4
517 16.95 precipitation 0.1 14400 < th dose independent rect. 9 1
518 16.95 atmosphere 1000.0 270 > th dose independent rect. 1 4
520 16.95 wind 5.0 10 < th dose independent rect. 2 5
525 16.95 precipitation 0.1 14400 < th dose dependent rect. 9 1
533 16.95 radiation 1.0 270 < th dose dependent rect. 1 10
545 16.96 temperature 10.0 270 > th dose independent rect. 1 4
547 16.96 temperature 30.0 270 < th dose independent rect. 1 4
548 16.96 humidity 50.0 270 > th dose independent rect. 1 4
552 16.96 atmosphere 1010.0 270 < th dose independent rect. 1 4
554 16.96 radiation 20.0 270 < th dose independent rect. 1 4
561 16.96 wind 9.0 270 < th dose independent rect. 3 23
565 16.96 radiation 40.0 90 < th dose dependent rect. 3 3
567 16.96 radiation 20.0 270 < th dose dependent rect. 1 4
593 16.97 radiation 1.0 270 < th dose independent rect. 1 4
612 16.98 atmosphere 1015.0 1440 < th dose independent rect. 3 5
615 16.98 humidity 90.0 14400 > th dose dependent sin 2 NA
637 16.99 precipitation 0.1 14400 > th dose independent rect. 6 2
639 16.99 wind 9.0 14400 > th dose independent rect. 21 15
643 16.99 precipitation 0.1 14400 > th dose dependent rect. 6 2
674 17.01 precipitation 0.1 10 < th dose independent rect. 7 19
680 17.01 radiation 40.0 270 < th dose dependent rect. 15 14
681 17.01 wind 9.0 14400 > th dose dependent rect. 22 15
687 17.01 precipitation 0.1 10 < th dose dependent rect. 7 19
705 17.02 wind 9.0 14400 > th dose dependent rect. 5 7
713 17.03 wind 3.0 43200 > th dose independent rect. 1 3
744 17.04 temperature 20.0 10 < th dose independent rect. 24 22
788 17.06 precipitation 0.1 10 < th dose independent rect. 2 5
790 17.06 humidity 70.0 10 > th dose independent rect. 16 15
795 17.06 temperature 20.0 90 < th dose independent rect. 1 21
801 17.06 precipitation 0.1 10 < th dose dependent rect. 2 5
811 17.07 temperature 10.0 270 > th dose independent rect. 2 1
813 17.07 temperature 30.0 270 < th dose independent rect. 2 1
814 17.07 humidity 50.0 270 > th dose independent rect. 2 1
817 17.07 atmosphere 995.0 270 > th dose independent rect. 2 1
818 17.07 atmosphere 1010.0 270 < th dose independent rect. 2 1
820 17.07 radiation 1.0 270 < th dose independent rect. 2 1
829 17.07 radiation 1.0 270 < th dose dependent rect. 2 1
841 17.07 wind 7.0 14400 > th dose dependent rect. 3 10
862 17.08 temperature 30.0 10 < th dose dependent rect. 4 2
878 17.09 wind 3.0 43200 > th dose independent rect. 1 5
880 17.09 wind 9.0 14400 > th dose independent rect. 5 6
885 17.09 atmosphere 1000.0 10 > th dose dependent rect. 3 3
904 17.10 radiation 1.0 270 < th dose independent rect. 22 22
942 17.11 wind 9.0 10 < th dose dependent rect. 2 5
944 17.11 atmosphere 995.0 10 > th dose dependent rect. 2 5
946 17.11 humidity 90.0 14400 > th dose dependent rect. 7 7
959 17.12 wind 3.0 43200 > th dose independent rect. 5 1
965 17.12 humidity 90.0 14400 > th dose dependent rect. 7 1
991 17.13 wind 3.0 43200 < th dose independent rect. 1 5