BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0167300 Os11g0167300|AK071335
(925 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0167300 Protein of unknown function DUF537 family protein 1776 0.0
Os07g0637200 Protein of unknown function DUF537 family protein 141 2e-33
Os03g0370200 Protein of unknown function DUF537 family protein 110 6e-24
Os12g0162900 Protein of unknown function DUF537 family protein 105 2e-22
Os08g0230500 Protein of unknown function DUF537 family protein 93 1e-18
>Os11g0167300 Protein of unknown function DUF537 family protein
Length = 925
Score = 1776 bits (4599), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 875/925 (94%), Positives = 875/925 (94%)
Query: 1 MSRALLPRGSILLVLRPRVPSTPHRCFAIGAAAAVDGGETWXXXXXXXXXXXXXXAVKVS 60
MSRALLPRGSILLVLRPRVPSTPHRCFAIGAAAAVDGGETW AVKVS
Sbjct: 1 MSRALLPRGSILLVLRPRVPSTPHRCFAIGAAAAVDGGETWRGQLRQGEGEGRSRAVKVS 60
Query: 61 VWWDFQSCHLPQGANPCRVATRVTAALRDAGIRGPVDITALGDAYMLPRAVQEALAATGV 120
VWWDFQSCHLPQGANPCRVATRVTAALRDAGIRGPVDITALGDAYMLPRAVQEALAATGV
Sbjct: 61 VWWDFQSCHLPQGANPCRVATRVTAALRDAGIRGPVDITALGDAYMLPRAVQEALAATGV 120
Query: 121 AFSHVPSSGKGGPDQLFMADLTYWIAQNPPPAHFFLISGNKGLANILHRLRMSNYNVLLA 180
AFSHVPSSGKGGPDQLFMADLTYWIAQNPPPAHFFLISGNKGLANILHRLRMSNYNVLLA
Sbjct: 121 AFSHVPSSGKGGPDQLFMADLTYWIAQNPPPAHFFLISGNKGLANILHRLRMSNYNVLLA 180
Query: 181 CPSADSSVLCSAATIMWPWDALVKGLDFSPKHFNQPPDGISFSWYGHYRGPLDDLFLNXX 240
CPSADSSVLCSAATIMWPWDALVKGLDFSPKHFNQPPDGISFSWYGHYRGPLDDLFLN
Sbjct: 181 CPSADSSVLCSAATIMWPWDALVKGLDFSPKHFNQPPDGISFSWYGHYRGPLDDLFLNSE 240
Query: 241 XXXXXXXXXXXXXXXRDSKAFQPHTKSVKPPILPKSVANGVRQVLYSFPEGISLPNLRAE 300
RDSKAFQPHTKSVKPPILPKSVANGVRQVLYSFPEGISLPNLRAE
Sbjct: 241 SDDSMAESEDSLAESRDSKAFQPHTKSVKPPILPKSVANGVRQVLYSFPEGISLPNLRAE 300
Query: 301 LRKNHVFMDKGLFGFKNFSSLLQAMPDVVKFIDPLPGERNQPAVVGVSKRSMEPAEQIYK 360
LRKNHVFMDKGLFGFKNFSSLLQAMPDVVKFIDPLPGERNQPAVVGVSKRSMEPAEQIYK
Sbjct: 301 LRKNHVFMDKGLFGFKNFSSLLQAMPDVVKFIDPLPGERNQPAVVGVSKRSMEPAEQIYK 360
Query: 361 GKSSAQSSGEFKRLVQTLNEKXXXXXXXXXXXDILSADRKKVLAVDAPSSQSDLLSRNQE 420
GKSSAQSSGEFKRLVQTLNEK DILSADRKKVLAVDAPSSQSDLLSRNQE
Sbjct: 361 GKSSAQSSGEFKRLVQTLNEKPPSSHVPSSSSDILSADRKKVLAVDAPSSQSDLLSRNQE 420
Query: 421 KAPPVDLTTQPETPASCMEADVESVAGASAFTGEQITVDKKGLFERICVLWNDTEPVKPM 480
KAPPVDLTTQPETPASCMEADVESVAGASAFTGEQITVDKKGLFERICVLWNDTEPVKPM
Sbjct: 421 KAPPVDLTTQPETPASCMEADVESVAGASAFTGEQITVDKKGLFERICVLWNDTEPVKPM 480
Query: 481 LSPSQDDTHSKGSNDLLTQYANSNEHNSLLTRTLKIFSTTDNSDGDNVDSTSAISSSFSN 540
LSPSQDDTHSKGSNDLLTQYANSNEHNSLLTRTLKIFSTTDNSDGDNVDSTSAISSSFSN
Sbjct: 481 LSPSQDDTHSKGSNDLLTQYANSNEHNSLLTRTLKIFSTTDNSDGDNVDSTSAISSSFSN 540
Query: 541 MTANDHSDKLNVKENVGNTIIHSSRSVDTSNAEHKVGFIEKSKGIFSWAAKWWASGKPDT 600
MTANDHSDKLNVKENVGNTIIHSSRSVDTSNAEHKVGFIEKSKGIFSWAAKWWASGKPDT
Sbjct: 541 MTANDHSDKLNVKENVGNTIIHSSRSVDTSNAEHKVGFIEKSKGIFSWAAKWWASGKPDT 600
Query: 601 DDNLSSVHINDGTREESEKESAFVKTAATASEQQVGVELFMKPYFWDALQQYLSTPHGSD 660
DDNLSSVHINDGTREESEKESAFVKTAATASEQQVGVELFMKPYFWDALQQYLSTPHGSD
Sbjct: 601 DDNLSSVHINDGTREESEKESAFVKTAATASEQQVGVELFMKPYFWDALQQYLSTPHGSD 660
Query: 661 LVSKAKTREELAHGLQKQGHWPLKSLGGKHHHQLVDLLISEKQWIKESSSQTSPFRLALP 720
LVSKAKTREELAHGLQKQGHWPLKSLGGKHHHQLVDLLISEKQWIKESSSQTSPFRLALP
Sbjct: 661 LVSKAKTREELAHGLQKQGHWPLKSLGGKHHHQLVDLLISEKQWIKESSSQTSPFRLALP 720
Query: 721 QRRARSPLLSFFTNGRPSGQRKHVDDRSPTLSRTSVHVLPTKNGKGQASCKSNENQSKSD 780
QRRARSPLLSFFTNGRPSGQRKHVDDRSPTLSRTSVHVLPTKNGKGQASCKSNENQSKSD
Sbjct: 721 QRRARSPLLSFFTNGRPSGQRKHVDDRSPTLSRTSVHVLPTKNGKGQASCKSNENQSKSD 780
Query: 781 DFLEKELGPVSDSGKPYRQNDKAVRHHPPTCSDDEFSDDENHEVVQEAGRDAAQSSLFKI 840
DFLEKELGPVSDSGKPYRQNDKAVRHHPPTCSDDEFSDDENHEVVQEAGRDAAQSSLFKI
Sbjct: 781 DFLEKELGPVSDSGKPYRQNDKAVRHHPPTCSDDEFSDDENHEVVQEAGRDAAQSSLFKI 840
Query: 841 IDSWNTSKTICSSKKQHGIGGIVDCSRINRGNGGDNSITENAEKATSLSKHSYMTXXXXX 900
IDSWNTSKTICSSKKQHGIGGIVDCSRINRGNGGDNSITENAEKATSLSKHSYMT
Sbjct: 841 IDSWNTSKTICSSKKQHGIGGIVDCSRINRGNGGDNSITENAEKATSLSKHSYMTSDSDS 900
Query: 901 XXXEEKLFNSVLGSLQNAKNSSLPG 925
EEKLFNSVLGSLQNAKNSSLPG
Sbjct: 901 DSDEEKLFNSVLGSLQNAKNSSLPG 925
>Os07g0637200 Protein of unknown function DUF537 family protein
Length = 652
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 94/149 (63%)
Query: 57 VKVSVWWDFQSCHLPQGANPCRVATRVTAALRDAGIRGPVDITALGDAYMLPRAVQEALA 116
K SVWWD ++C +P+ +P +A +++AL AG GPV I+A GD + AV AL+
Sbjct: 7 AKTSVWWDIENCQVPRACDPNLIAQNMSSALAAAGYTGPVSISAYGDIGRIGNAVTHALS 66
Query: 117 ATGVAFSHVPSSGKGGPDQLFMADLTYWIAQNPPPAHFFLISGNKGLANILHRLRMSNYN 176
+TG++ +HVP+ K D+ + D+ +W NPPPA++ LISG++ +N LH+L M YN
Sbjct: 67 STGISLNHVPAGIKDASDKKILVDMLFWAIDNPPPANYLLISGDRDFSNALHKLTMRRYN 126
Query: 177 VLLACPSADSSVLCSAATIMWPWDALVKG 205
+LLA P S L +AA +W W +LV G
Sbjct: 127 ILLAQPPNVSQALTAAAKSVWLWKSLVAG 155
>Os03g0370200 Protein of unknown function DUF537 family protein
Length = 180
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Query: 58 KVSVWWDFQSCHLPQGA-NPCRVATRVTAALRDAGIRGPVDITALGDAYMLPRAVQEALA 116
K SVWWD C +P +P RVA V AAL AG GPV I A GDA + V AL+
Sbjct: 12 KTSVWWDIDRCGVPPCCRDPHRVAHGVIAALAAAGCAGPVSIFAYGDAARVAPPVLAALS 71
Query: 117 ATGVAFSHVPSSGKGGPDQLFMADLTYWIAQNPPPAHFFLISGNKGLANILHRLRMSNYN 176
+TG++ +HVP+ K G D+ + D+ +W NPPP ++ LISG++ +++LHRLRM Y
Sbjct: 72 STGISLNHVPAGAKDGTDKKMLVDMLFWAFDNPPPGNYLLISGDQDFSDLLHRLRMKRYG 131
Query: 177 VLLACPSADSSVLCSAAT 194
+LLA PS SS + +AA
Sbjct: 132 ILLAQPSNVSSRVLAAAA 149
>Os12g0162900 Protein of unknown function DUF537 family protein
Length = 141
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 57/73 (78%)
Query: 56 AVKVSVWWDFQSCHLPQGANPCRVATRVTAALRDAGIRGPVDITALGDAYMLPRAVQEAL 115
AVKVSVWWDF++C+LP G NP RVA RVTAALR AGIRGP+ ITA GD L R QE L
Sbjct: 52 AVKVSVWWDFENCNLPNGVNPGRVAPRVTAALRAAGIRGPLSITAFGDVVQLARPSQEDL 111
Query: 116 AATGVAFSHVPSS 128
ATGV+ SHVP+S
Sbjct: 112 VATGVSISHVPNS 124
>Os08g0230500 Protein of unknown function DUF537 family protein
Length = 530
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 79/151 (52%), Gaps = 4/151 (2%)
Query: 59 VSVWWDFQSCHLPQGANPCRVATRVTAALR-DAGIRGPVD-ITALGDAYMLPRAVQEALA 116
V+++WD ++C +P P VA V ALR ++G V ++A GD PR ++E
Sbjct: 52 VAIFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTMLSAYGDFNAFPRRLREGCQ 111
Query: 117 ATGVAFSHVPSSGKGGPDQLFMADLTYWIAQNPPPAHFFLISGNKGLANILHRLRMSNYN 176
TGV VP+ K D+ + D+ + N PP+ LISG+ A LH L Y
Sbjct: 112 RTGVKLVDVPNGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVDFAPALHILGQRGYT 171
Query: 177 VLLACPSA--DSSVLCSAATIMWPWDALVKG 205
++LA PS+ SS L SA + +W W +L +G
Sbjct: 172 IVLAIPSSVTVSSALSSAGSFVWDWPSLARG 202
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.129 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 32,204,479
Number of extensions: 1387931
Number of successful extensions: 2849
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2844
Number of HSP's successfully gapped: 5
Length of query: 925
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 815
Effective length of database: 11,292,261
Effective search space: 9203192715
Effective search space used: 9203192715
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 161 (66.6 bits)