Os07g0637200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF537 family protein.
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Os07g0637200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF537 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.28 | 0.377 | 10.2 | -0.521 | 2.18 | 2.93 | -0.383 | 0.855 | -0.291 | 15.2 | 0.06 | 674 | -- | -- |
| 64.27 | 0.373 | 10.2 | -0.484 | 2.22 | 2.92 | -0.849 | -- | -0.299 | 15.2 | 0.009828 | 663 | -- | -- |
| 63.67 | 0.372 | 10.2 | -0.517 | 2.32 | 3.03 | -- | 1.18 | -0.288 | 15.3 | 0.007502 | 662 | -- | -- |
| 65.37 | 0.377 | 10.2 | -0.511 | 2.35 | 2.93 | -- | -- | -0.302 | 15.1 | 0.009685 | 641 | -- | -- |
| 75.17 | 0.404 | 10.2 | -0.366 | -- | 2.49 | -- | 1.22 | -0.246 | -- | 0.0008326 | 1151 | -- | -- |
| 83.17 | 0.428 | 10.2 | -0.825 | 1.32 | -- | 0.536 | -- | -0.408 | 9.3 | -- | -- | -- | -- |
| 84.17 | 0.43 | 10.2 | -0.805 | 1.31 | -- | -- | -- | -0.406 | 9.37 | -- | -- | -- | -- |
| 73.95 | 0.401 | 10.2 | -0.449 | -- | 2.31 | -- | -- | -0.242 | -- | 0.4 | 1145 | -- | -- |
| 71.98 | 0.395 | 10.2 | -- | 2.32 | 2.87 | -- | -- | -0.261 | 15 | 0.009999 | 636 | -- | -- |
| 185.25 | 0.636 | 10.2 | -0.812 | -- | -- | -- | -- | -0.401 | -- | -- | -- | -- | -- |
| 101.24 | 0.471 | 10.2 | -- | 1.32 | -- | -- | -- | -0.317 | 9.42 | -- | -- | -- | -- |
| 78.78 | 0.413 | 10.2 | -- | -- | 2.39 | -- | -- | -0.193 | -- | 0.248 | 1141 | -- | -- |
| 202.64 | 0.664 | 10.2 | -- | -- | -- | -- | -- | -0.311 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.88 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 18 |
| 3 | 57.29 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 11 | 58.65 | radiation | 1.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 13 | 58.69 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 25 | 59.43 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 27 | 59.48 | radiation | 1.0 | 270 | < th | dose independent | sin | 6 | NA |
| 31 | 59.57 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 7 |
| 34 | 59.66 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 35 | 59.68 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 36 | 59.78 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 17 |
| 44 | 60.01 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 17 |
| 48 | 60.13 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 15 |
| 53 | 60.30 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 16 |
| 59 | 60.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 61 | 60.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 62 | 60.42 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 9 |
| 80 | 60.72 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 82 | 60.74 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 85 | 60.77 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 87 | 60.77 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 88 | 60.77 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 91 | 60.77 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 92 | 60.77 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 94 | 60.77 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 107 | 60.81 | wind | 7.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 110 | 60.85 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 118 | 60.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 7 |
| 119 | 60.95 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 120 | 60.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 141 | 61.09 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 157 | 61.23 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 168 | 61.32 | radiation | 30.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 170 | 61.34 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 173 | 61.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 174 | 61.34 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 15 |
| 180 | 61.38 | wind | 7.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 187 | 61.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 188 | 61.41 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 189 | 61.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 192 | 61.41 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 199 | 61.42 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 15 |
| 201 | 61.42 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 15 |
| 227 | 61.53 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 237 | 61.58 | radiation | 1.0 | 270 | > th | dose independent | sin | 5 | NA |
| 267 | 61.66 | radiation | 40.0 | 270 | < th | dose independent | rect. | 12 | 17 |
| 270 | 61.70 | humidity | 60.0 | 10 | > th | dose dependent | sin | 5 | NA |
| 271 | 61.71 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 278 | 61.73 | wind | 7.0 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 289 | 61.80 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 311 | 61.96 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 314 | 61.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 20 |
| 316 | 61.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 319 | 62.03 | temperature | 15.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 322 | 62.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 15 |
| 329 | 62.08 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 330 | 62.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 334 | 62.11 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 337 | 62.12 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 9 |
| 338 | 62.13 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 343 | 62.14 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 17 |
| 346 | 62.14 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 17 |
| 386 | 62.38 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 7 |
| 391 | 62.41 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 2 | 14 |
| 393 | 62.42 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 398 | 62.44 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 1 | 6 |
| 426 | 62.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 427 | 62.58 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 428 | 62.58 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 429 | 62.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 8 |
| 434 | 62.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 436 | 62.59 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 438 | 62.61 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 450 | 62.65 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 491 | 62.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 504 | 62.80 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 16 |
| 506 | 62.80 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 16 |
| 525 | 62.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 9 |
| 530 | 62.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 538 | 62.86 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 14 |
| 561 | 62.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 15 |
| 564 | 62.92 | wind | 5.0 | 10 | < th | dose dependent | rect. | 2 | 5 |
| 570 | 62.95 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 15 |
| 592 | 63.04 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 676 | 63.13 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 689 | 63.16 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 17 |
| 711 | 63.23 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 9 |
| 750 | 63.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 836 | 63.55 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 860 | 63.61 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 16 |
| 892 | 63.67 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 893 | 63.68 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 932 | 63.74 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 991 | 63.81 | radiation | 10.0 | 10 | < th | dose independent | rect. | 2 | 6 |
| 992 | 63.82 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 19 | 8 |