Os08g0230500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF537 family protein.
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Os08g0230500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF537 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.49 | 0.259 | 8.73 | 1.87 | 0.738 | -1.39 | 0.389 | 2.52 | 0.31 | 13.1 | 8.641 | 1276 | -- | -- |
| 35.69 | 0.278 | 8.8 | 1.32 | 0.749 | -1.35 | 0.185 | -- | 0.162 | 13.1 | 7.772 | 1312 | -- | -- |
| 30.97 | 0.259 | 8.73 | 1.88 | 0.799 | -1.37 | -- | 2.41 | 0.312 | 13.1 | 10.06 | 1415 | -- | -- |
| 35.81 | 0.279 | 8.8 | 1.34 | 0.714 | -1.38 | -- | -- | 0.17 | 13.2 | 8.07 | 1239 | -- | -- |
| 56.49 | 0.35 | 8.73 | 1.87 | -- | -1.79 | -- | 2.29 | 0.321 | -- | 14.8 | 1023 | -- | -- |
| 66.44 | 0.382 | 8.85 | 0.912 | 0.863 | -- | 0.254 | -- | -0.0786 | 13.2 | -- | -- | -- | -- |
| 66.7 | 0.382 | 8.85 | 0.921 | 0.863 | -- | -- | -- | -0.0771 | 13.2 | -- | -- | -- | -- |
| 60.4 | 0.362 | 8.8 | 1.4 | -- | -1.78 | -- | -- | 0.206 | -- | 4.555 | 1025 | -- | -- |
| 76.85 | 0.408 | 8.85 | -- | 0.735 | -0.823 | -- | -- | -0.0637 | 13.2 | 11.25 | 1152 | -- | -- |
| 112.75 | 0.496 | 8.86 | 0.888 | -- | -- | -- | -- | -0.0948 | -- | -- | -- | -- | -- |
| 89.07 | 0.441 | 8.87 | -- | 0.847 | -- | -- | -- | -0.18 | 13.2 | -- | -- | -- | -- |
| 106.09 | 0.48 | 8.85 | -- | -- | -1.2 | -- | -- | -0.029 | -- | 14.81 | 996 | -- | -- |
| 133.54 | 0.539 | 8.89 | -- | -- | -- | -- | -- | -0.193 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 21 |
| 9 | 30.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 11 | 30.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 12 | 30.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 19 |
| 25 | 30.50 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 111 | 30.61 | temperature | 10 | 1440 | > th | dose dependent | sin | 17 | NA |
| 154 | 30.66 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 184 | 30.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 233 | 30.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 362 | 30.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 17 |
| 412 | 30.99 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 493 | 31.07 | temperature | 30 | 1440 | < th | dose dependent | sin | 16 | NA |
| 573 | 31.16 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 608 | 31.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 629 | 31.23 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 643 | 31.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |