BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0230500 Os08g0230500|AK107589
(530 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G15560.1 | chr2:6788319-6789788 REVERSE LENGTH=490 396 e-110
AT3G62210.1 | chr3:23026910-23028113 REVERSE LENGTH=280 116 3e-26
AT3G62200.1 | chr3:23023437-23025671 REVERSE LENGTH=674 115 6e-26
AT5G61190.1 | chr5:24615480-24619886 FORWARD LENGTH=996 114 1e-25
AT5G09840.1 | chr5:3059027-3061970 FORWARD LENGTH=925 107 1e-23
AT5G61180.1 | chr5:24612867-24614174 FORWARD LENGTH=347 105 5e-23
AT5G64710.1 | chr5:25869368-25872092 FORWARD LENGTH=842 104 1e-22
AT3G61028.2 | chr3:22581506-22584209 REVERSE LENGTH=255 81 1e-15
AT3G60940.1 | chr3:22521615-22523029 REVERSE LENGTH=258 79 9e-15
AT3G62050.1 | chr3:22978305-22978944 FORWARD LENGTH=158 54 2e-07
AT4G30760.1 | chr4:14982552-14983285 FORWARD LENGTH=192 53 4e-07
AT5G35640.1 | chr5:13834633-13835606 FORWARD LENGTH=193 52 6e-07
>AT2G15560.1 | chr2:6788319-6789788 REVERSE LENGTH=490
Length = 489
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/460 (46%), Positives = 289/460 (62%), Gaps = 40/460 (8%)
Query: 41 ANNQSVSVLGPVAIFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTMLSAYGDFN 100
A + S GP+AI WD+ENCPVPSDVRPEDVA N+RMA++LHPV+ G V SAYGDFN
Sbjct: 39 ATQRHSSTDGPMAILWDMENCPVPSDVRPEDVASNIRMAIQLHPVISGPVVNFSAYGDFN 98
Query: 101 AFPRRLREGCQRTGVKLVDVPNGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVDFAP 160
FPRR+REGCQRTGVKL+DVPNGRKDA+DKAIL+DMFLF LDN+PP++I+L+SGDVDFAP
Sbjct: 99 GFPRRVREGCQRTGVKLIDVPNGRKDASDKAILIDMFLFVLDNKPPATIVLVSGDVDFAP 158
Query: 161 ALHILGQRGYTIVLAIPXXXXXXXXXXXXXXFVWDWPSLARGEGIVAPRSIGRRFADPPG 220
ALHILGQRGYT++L IP FVWDW S+ GEG V PR R
Sbjct: 159 ALHILGQRGYTVILVIPSSVYVNSALSNAGKFVWDWHSIVHGEGFV-PRCKPRVVP---- 213
Query: 221 YQHGGNFG--SFPDTQNEEEAIVYMGTSRNECSGRTTSNQIYCYNSSQTTREPSKAFYTV 278
Y G N G S D NE+E I+Y G + ++S + SQ E S +
Sbjct: 214 YLMGCNIGDNSNMDGLNEDETILYRGNCYSSDPRESSSLMV-----SQFRNEYSSGVMS- 267
Query: 279 TDGNCGTSSRSHNLACSLNEGPDVDQGLPDERSWWVRPGDLQGLKGQLLRLFELSGGSVP 338
C S+ ++AC + E + WV PGDL GLKGQL++L ELSGG +P
Sbjct: 268 ----CWPSNSGESMACPPSGHL--------ESTMWVAPGDLNGLKGQLVKLLELSGGCIP 315
Query: 339 LVRVPSEYLKLFGRHLYVSEYGAVKLIHLFEKLADSFVVIGKGHRKVICLRNSGDSNLKK 398
L+RVPSEY + F + L+VS+YG KL+ LF+K++D VV GKG+++ + LRNS N+
Sbjct: 316 LMRVPSEYQRKFSKPLFVSDYGVAKLVDLFKKMSDVIVVDGKGNKRFVYLRNS-KPNIIS 374
Query: 399 YSTTPIILKKENRGGSILDESTIGTGQQLGSSSDDFSEDERNINPDVDGAYAFDSHLDNF 458
S+ ++L++E +G +T G G SSD+ S+ G+ + +L+ F
Sbjct: 375 PSSPVVLLRRERKGKEPNGVTTNG-----GVSSDEMSD---------TGSVQSERNLEEF 420
Query: 459 RQEIQELLVCYSCPVPLGNFKSLYEQRYKKTLIYESFGVD 498
+ E+Q++LV Y C V + F+++Y+ RYK+ L Y + GV+
Sbjct: 421 KFELQDILVSYCCQVQMDCFEAIYKLRYKRPLAYTNMGVN 460
>AT3G62210.1 | chr3:23026910-23028113 REVERSE LENGTH=280
Length = 279
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 87/155 (56%), Gaps = 4/155 (2%)
Query: 48 VLGPVAIFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTMLSAYGDFNAFPRRLR 107
V+ +++WDIENC VP + +A N+ AL+ G V+ +SAYGD + P ++
Sbjct: 20 VMAKTSVWWDIENCQVPKGLDAHGIAQNISSALKKMNYC-GRVS-ISAYGDTSGIPHVIQ 77
Query: 108 EGCQRTGVKLVDVPNGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVDFAPALHILGQ 167
TG++L VP G KDA+DK ILVDM +A DN PS+IMLISGD DF+ ALH L
Sbjct: 78 HALNSTGIELHHVPAGVKDASDKKILVDMLFWAFDNPAPSNIMLISGDRDFSNALHKLSL 137
Query: 168 RGYTIVLAIPXXXXXXXXXXXXXXFVWDWPSLARG 202
R Y I+LA P VW W SL G
Sbjct: 138 RRYNILLAHPPKASAPLSQAATT--VWLWTSLLAG 170
>AT3G62200.1 | chr3:23023437-23025671 REVERSE LENGTH=674
Length = 673
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 87/155 (56%), Gaps = 4/155 (2%)
Query: 48 VLGPVAIFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTMLSAYGDFNAFPRRLR 107
V +++WDIENC VP+ + +A N+ AL+ G V+ +SAYGD N P ++
Sbjct: 26 VRAKTSVWWDIENCQVPNGLDAHGIAQNITSALQKMNYC-GPVS-ISAYGDTNRIPLTIQ 83
Query: 108 EGCQRTGVKLVDVPNGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVDFAPALHILGQ 167
TG+ L VP G KDA+DK ILVDM +ALDN P++ MLISGD DF+ ALH L
Sbjct: 84 HALNSTGIALNHVPAGVKDASDKKILVDMLFWALDNPAPANFMLISGDRDFSNALHGLRM 143
Query: 168 RGYTIVLAIPXXXXXXXXXXXXXXFVWDWPSLARG 202
R Y ++LA P VW W SL+ G
Sbjct: 144 RRYNVLLAQPLKASVPLVHAAKT--VWLWTSLSAG 176
>AT5G61190.1 | chr5:24615480-24619886 FORWARD LENGTH=996
Length = 995
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
Query: 48 VLGPVAIFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTMLSAYGDFNAFPRRLR 107
V +++WDIENC VP +A NV +L L G V+ +SAYGD N P +
Sbjct: 9 VKAKTSVWWDIENCEVPRGWDAHVIALNVSSSL-LKMNYCGPVS-ISAYGDTNLIPLHHQ 66
Query: 108 EGCQRTGVKLVDVPNGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVDFAPALHILGQ 167
+ TGV L +P G KDA+DK ILVDM L+A+DN P++++LISGD DF+ ALH L
Sbjct: 67 QALSSTGVALNHIPAGVKDASDKKILVDMLLWAIDNPAPANLLLISGDRDFSNALHQLRM 126
Query: 168 RGYTIVLAIPXXXXXXXXXXXXXXFVWDWPSLARG 202
R Y I+LA P VW W LA G
Sbjct: 127 RRYNILLAQPPRASVPLVAAARD--VWLWTVLASG 159
>AT5G09840.1 | chr5:3059027-3061970 FORWARD LENGTH=925
Length = 924
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 11/191 (5%)
Query: 40 QANNQSVSVLGPVAIFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTMLSAYGDF 99
Q + +S SV V+++WD +C +P D VA ++ A+R + +KG +T ++A+GD
Sbjct: 63 QQDEESRSVR--VSVWWDFLSCNLPVDTNVYKVAQSITAAIR-NSGIKGPIT-ITAFGDV 118
Query: 100 NAFPRRLREGCQRTGVKLVDVPNGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVDFA 159
PR ++ TG+ L VPNG K++AD++++ D+ + N PP+ ++LIS D +FA
Sbjct: 119 LQLPRSNQDALSATGISLTHVPNGGKNSADRSLITDLMCWVSQNPPPAHLLLISSDKEFA 178
Query: 160 PALHILGQRGYTIVLAIPXXXXXXXXXXXXXXFVWDWPSLARGEGIVAPRSIGRRFADPP 219
LH L Y I+LA +WDW +L +GE + G+ F PP
Sbjct: 179 SVLHRLRMNNYNILLA--SKSSAPGVLCSAASIMWDWDALIKGECVT-----GKHFNQPP 231
Query: 220 GYQHGGNFGSF 230
+ +G +
Sbjct: 232 DGPYNSWYGHY 242
>AT5G61180.1 | chr5:24612867-24614174 FORWARD LENGTH=347
Length = 346
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 52 VAIFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTMLSAYGDFNAFPRRLREGCQ 111
+++WDIENC VP P VA ++R L G +T+ AYGD N P +++
Sbjct: 82 TSVWWDIENCEVPKGCDPHGVAQSIRSVLSKSNFC-GPLTIY-AYGDTNQIPSSVQQALS 139
Query: 112 RTGVKLVDVP------------------NGRKDAADKAILVDMFLFALDNRPPSSIMLIS 153
TGV L VP G KD +DK +LVD+ L+A+DN+ P++IMLIS
Sbjct: 140 STGVSLNHVPAVSNGLIILYVLDDGEHLTGVKDGSDKKLLVDIMLWAMDNQAPANIMLIS 199
Query: 154 GDVDFAPALHILGQRGYTIVLAIPXXXXXXXXXXXXXXFVWDWPSLARGEGIVAPRSI-G 212
GD DF+ LH LG + Y I+LA P VW W S+ G+ P +
Sbjct: 200 GDKDFSYLLHKLGMKRYNILLARPEKASTPLIAAAKT--VWLWTSIFNGDCPNIPIDLTT 257
Query: 213 RRFADPPGYQHGGNFG 228
RR Y+ + G
Sbjct: 258 RRHHHDSAYEVSRHLG 273
>AT5G64710.1 | chr5:25869368-25872092 FORWARD LENGTH=842
Length = 841
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 34 SNMEHSQANNQSVSVLGPVAIFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTML 93
++++ SQ S SV PV +WD ENC +PS +A + A+R+ + KG +T +
Sbjct: 46 TSLKRSQYEEDSRSVRVPV--WWDFENCHLPSGANVFKLAQTITSAVRICGI-KGPIT-I 101
Query: 94 SAYGDFNAFPRRLREGCQRTGVKLVDVPNGRKDAADKAILVDMFLFALDNRPPSSIMLIS 153
+AYGD R +E TG+ L VP G K++ D++++ ++ + N PP+ + LIS
Sbjct: 102 TAYGDMIQLSRTNQEALFATGINLTHVPQGGKNSTDRSLITEIMCWVSQNPPPAHLFLIS 161
Query: 154 GDVDFAPALHILGQRGYTIVLAIPXXXXXXXXXXXXXXFVWDWPSLARGEGIVAPRSIGR 213
D DFA LH L R Y I+LA +WDW +L RG+ A +
Sbjct: 162 SDSDFANVLHRLRMRNYNILLAC-YEETTLGVLCSAASIMWDWDALVRGQNPTA-----K 215
Query: 214 RFADPPGYQHGGNFGSF 230
F PP + +G +
Sbjct: 216 HFNQPPDGPYHSWYGHY 232
>AT3G61028.2 | chr3:22581506-22584209 REVERSE LENGTH=255
Length = 254
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Query: 54 IFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTMLSAYGDFNAFPRRLREGCQRT 113
I+WD+++C +P V P + GN+R +L +G +T ++A+G+ N T
Sbjct: 84 IWWDVDSCRLPDSVDPYRLVGNLRKSLN-EKGYRGPITSINAFGNTNRIDETTMLALSAT 142
Query: 114 GVKLVDVPNGRKDAADKAILVDMFLFALDN-RPPSSIMLISGDVDFAPALHILG 166
GV +P+GRK++A K ILVD+ F +DN + P +IMLIS +P +H+ G
Sbjct: 143 GVYTRHIPDGRKESAHKKILVDLLCFGMDNIQQPCNIMLISARPGCSPKMHVCG 196
>AT3G60940.1 | chr3:22521615-22523029 REVERSE LENGTH=258
Length = 257
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Query: 54 IFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTMLSAYGDFNAFPRRLREGCQRT 113
++WD EN PVP + GN+R AL + +G ++ + A+G+ P ++ T
Sbjct: 85 VWWDTENSPVPRGFDAYRIGGNIRNALNENGY-RGPIS-IRAFGNMRLIPTPIQLALTST 142
Query: 114 GVKLVDVPNGR-------KDAADKAILVDMFLFALDNRP-PSSIMLISGDVDFAPALHIL 165
G+ L VP + KDA+D I+ + + N P PS++M+I+GD D++ ALH L
Sbjct: 143 GIDLYHVPGNKVGSRKTIKDASDFKIIGHVLTWIALNHPQPSNLMVITGDRDYSVALHQL 202
Query: 166 GQRGYTIVLAIPXXXXXXXXXXXXXXFVWDWPSLARGEGIVAPRSI 211
R + I+LA P VW W SL G+ +A I
Sbjct: 203 RCRSFNILLACPESSTSTALLRAATS-VWKWNSLILGQKPLAENEI 247
>AT3G62050.1 | chr3:22978305-22978944 FORWARD LENGTH=158
Length = 157
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 15/126 (11%)
Query: 54 IFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTMLSAYGDFNA--FPRRLREGCQ 111
IFWDIE+C +P D+ D N++ AL G V++ AYGD FP
Sbjct: 16 IFWDIEDCKIPDDLNAGDALKNIKSALS-SDGHHGTVSV-RAYGDTTGLDFPSE------ 67
Query: 112 RTGVKLVDVPNGRKDAADKAILVDMFLFALDNRPPSSIMLISGDV--DFAPALHIL-GQR 168
G+KL P G + A +L D+ ++ ++ PS++ LI GD DF + +L ++
Sbjct: 68 --GIKLNHFPAGERYARQTKMLEDIVSWSAEHPEPSTLFLIVGDTSRDFLDVVQLLKSKK 125
Query: 169 GYTIVL 174
Y ++
Sbjct: 126 NYNFII 131
>AT4G30760.1 | chr4:14982552-14983285 FORWARD LENGTH=192
Length = 191
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 50 GPVAIFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTMLSAYGDFNAFPRRLREG 109
G +FWD+E+ P+P+D+ P + + ++ + A + AY + N +R
Sbjct: 18 GKTCVFWDVEDYPIPADLHPRSIRRRIVKDVKKYGC--DAEVSIHAYANDNTVSVTMRRQ 75
Query: 110 CQRTGVKL-VDVPNGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVD 157
G+KL V G K A ++ D+ L++L+N PPS+I++I+ +D
Sbjct: 76 FSAAGIKLEVFTQAGDKYARHCSLYGDIMLWSLENPPPSNIIVIAKIID 124
>AT5G35640.1 | chr5:13834633-13835606 FORWARD LENGTH=193
Length = 192
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 53 AIFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTMLSAYGDFNAFPRRLREGCQR 112
+++WDI CP+P+DV V+ ++ AL GA+T +A G P
Sbjct: 35 SVWWDINRCPLPNDVDVRRVSPFIKRALE-KLGYTGALTT-TAIGILTDVPHDFLTQVYS 92
Query: 113 TGVKLVDVP-NGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVDFAPALHILGQRGYT 171
+G+ + +P D + + V + DN PPS+IMLIS ++ F+ L L GY
Sbjct: 93 SGIAIHHIPLVSETDIFELSSAV--IYWTWDNLPPSNIMLISNELIFSSLLDKLCGFGYN 150
Query: 172 IVLAI 176
+V +I
Sbjct: 151 VVRSI 155
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,617,708
Number of extensions: 513777
Number of successful extensions: 1214
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 1199
Number of HSP's successfully gapped: 12
Length of query: 530
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 427
Effective length of database: 8,282,721
Effective search space: 3536721867
Effective search space used: 3536721867
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)