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Os11g0167300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF537 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.56 (0.0314) R2 : 0.794
β1 : 1.66 (0.115) R2dD : 0.0982 R2D : 0.0738
β2 : 1.96 (0.0948) R2dC : 0.269 R2C : 0.502
β3 : -2 (0.112) R2dE : 0.197 R2E : 0.435
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.37 (0.0672) R2dN8 : 0.0186 R2N8 : -0.0107
σ : 0.587
deviance : 159.12
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C
peak time of C : 16.1
E
wheather : radiation
threshold : 23.41
memory length : 221
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.03
open length of G : 6.33

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
146.15 0.568 6.56 1.6 1.99 -1.97 1.06 -1.8 0.353 16.2 23.44 228 3.03 6.35
151.61 0.573 6.55 1.67 2.02 -1.95 1.25 -- 0.388 16.3 21.87 221 3.15 6.3
148.72 0.568 6.56 1.6 1.95 -1.97 -- -2.11 0.369 16.1 25.85 220 3.02 6.37
159.12 0.587 6.56 1.66 1.96 -2 -- -- 0.37 16.1 23.41 221 3.03 6.33
251.3 0.738 6.52 1.6 -- -2.68 -- -1.57 0.406 -- 39.87 160 2.45 6.4
204.41 0.67 6.61 1.66 3.06 -- 2.23 -- 0.288 17.3 -- -- -- --
216.79 0.69 6.61 1.66 3.07 -- -- -- 0.299 17.3 -- -- -- --
249.59 0.736 6.48 1.94 -- -2.78 -- -- 0.555 -- 64.04 249 1.25 6.53
232.71 0.71 6.59 -- 1.97 -1.96 -- -- 0.207 16.1 25.28 211 3.13 6.65
709.65 1.24 6.57 1.55 -- -- -- -- 0.222 -- -- -- -- --
289.18 0.795 6.65 -- 3.04 -- -- -- 0.114 17.3 -- -- -- --
321.18 0.835 6.57 -- -- -2.78 -- -- 0.224 -- 28.37 262 1.04 6.97
773.12 1.3 6.61 -- -- -- -- -- 0.05 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 148.69 radiation 20.0 270 < th dose dependent rect. 3 6
3 149.48 radiation 10.0 270 < th dose independent rect. 3 5
4 149.53 wind 7.0 270 < th dose independent rect. 7 20
7 150.53 radiation 10.0 270 < th dose dependent rect. 3 10
19 151.43 wind 9.0 270 < th dose independent rect. 5 23
28 152.43 precipitation 0.1 270 < th dose independent rect. 3 3
29 152.43 precipitation 0.1 270 < th dose dependent rect. 3 3
32 152.72 radiation 30.0 90 < th dose independent rect. 4 5
33 152.73 wind 5.0 270 < th dose independent rect. 3 3
43 153.09 temperature 10.0 90 > th dose dependent rect. 8 20
54 153.82 wind 5.0 270 < th dose independent rect. 4 1
59 154.00 humidity 70.0 90 > th dose independent rect. 4 4
67 154.29 atmosphere 1010.0 270 < th dose independent rect. 3 3
72 154.47 precipitation 0.1 270 < th dose independent rect. 4 1
73 154.47 precipitation 0.1 270 < th dose dependent rect. 4 1
77 154.56 temperature 10.0 270 > th dose independent rect. 3 3
79 154.56 temperature 30.0 270 < th dose independent rect. 3 3
80 154.56 humidity 50.0 270 > th dose independent rect. 3 3
83 154.56 atmosphere 995.0 270 > th dose independent rect. 3 3
88 154.56 temperature 10.0 270 > th dose independent rect. 6 21
104 154.87 precipitation 0.1 90 < th dose independent rect. 8 20
105 154.87 precipitation 0.1 90 < th dose dependent rect. 8 20
108 154.96 radiation 1.0 270 < th dose dependent rect. 4 1
136 155.31 temperature 10.0 270 > th dose independent rect. 4 1
138 155.31 temperature 30.0 270 < th dose independent rect. 4 1
139 155.31 humidity 50.0 270 > th dose independent rect. 4 1
142 155.31 atmosphere 995.0 270 > th dose independent rect. 4 1
143 155.31 atmosphere 1010.0 270 < th dose independent rect. 4 1
145 155.31 radiation 20.0 270 < th dose independent rect. 4 1
148 155.31 temperature 10.0 270 > th dose independent rect. 5 23
149 155.35 radiation 40.0 270 < th dose dependent rect. 4 1
151 155.40 precipitation 0.1 270 < th dose independent rect. 6 21
153 155.40 precipitation 0.1 270 < th dose dependent rect. 6 21
158 155.57 radiation 1.0 270 < th dose independent rect. 4 1
174 156.18 humidity 70.0 90 > th dose independent rect. 4 7
184 156.59 wind 9.0 270 < th dose dependent rect. 3 3
187 156.63 temperature 10.0 90 > th dose dependent rect. 8 7
194 156.93 radiation 40.0 270 < th dose dependent rect. 3 14
203 157.14 wind 9.0 270 < th dose dependent rect. 4 1
209 157.48 atmosphere 995.0 90 > th dose dependent rect. 4 4
222 157.74 wind 1.0 270 > th dose independent rect. 3 4
223 157.74 radiation 40.0 90 < th dose independent rect. 4 19
238 158.00 temperature 10.0 90 > th dose dependent rect. 4 4
239 158.00 wind 9.0 90 < th dose dependent rect. 8 20
246 158.08 atmosphere 995.0 270 > th dose dependent rect. 4 1
247 158.10 radiation 40.0 90 < th dose independent rect. 4 17
298 158.39 atmosphere 995.0 90 > th dose independent rect. 8 20
344 158.64 wind 9.0 270 < th dose dependent rect. 7 8
371 158.89 radiation 40.0 90 < th dose independent rect. 4 15
406 159.27 radiation 40.0 90 < th dose dependent rect. 4 19
412 159.36 temperature 10.0 270 > th dose dependent rect. 4 1
413 159.37 wind 7.0 270 < th dose independent rect. 7 8
438 159.55 radiation 20.0 90 < th dose independent rect. 4 19
451 159.74 radiation 1.0 270 < th dose independent rect. 3 14
464 159.93 wind 9.0 1440 < th dose independent rect. 5 4
465 159.93 temperature 10.0 1440 > th dose independent rect. 5 4
468 159.93 humidity 50.0 1440 > th dose independent rect. 5 4
470 159.93 atmosphere 995.0 1440 > th dose independent rect. 5 4
471 159.93 atmosphere 1015.0 1440 < th dose independent rect. 5 4
472 159.93 temperature 10.0 1440 > th dose independent rect. 9 20
477 159.98 humidity 50.0 270 > th dose dependent rect. 4 1
544 160.44 atmosphere 1005.0 270 > th dose independent rect. 3 4
549 160.47 humidity 50.0 90 > th dose dependent rect. 4 5
553 160.50 radiation 40.0 270 < th dose dependent rect. 15 16
695 162.03 atmosphere 1005.0 270 > th dose independent rect. 4 1
698 162.05 temperature 30.0 270 < th dose dependent rect. 4 1
700 162.07 radiation 20.0 90 < th dose independent rect. 15 18
714 162.22 humidity 60.0 90 > th dose dependent rect. 4 7
737 162.49 wind 7.0 270 < th dose independent rect. 22 14
764 162.71 radiation 10.0 270 > th dose independent rect. 16 21
801 163.08 radiation 40.0 270 < th dose independent rect. 2 15
816 163.15 radiation 10.0 270 > th dose independent sin 5 NA
819 163.17 temperature 30.0 90 < th dose dependent rect. 4 15
824 163.23 humidity 90.0 90 < th dose independent rect. 8 7
837 163.34 radiation 40.0 90 < th dose dependent rect. 3 22
851 163.44 radiation 10.0 270 < th dose dependent sin 3 NA
858 163.49 temperature 15.0 90 > th dose independent rect. 8 7
859 163.49 radiation 40.0 90 < th dose dependent rect. 13 20
860 163.50 wind 7.0 270 < th dose independent rect. 17 10
870 163.55 radiation 10.0 270 > th dose independent rect. 6 7
884 163.55 radiation 20.0 90 < th dose independent rect. 13 20
889 163.61 humidity 60.0 90 > th dose dependent rect. 4 15
907 163.72 radiation 20.0 90 < th dose independent rect. 3 22
940 163.93 temperature 15.0 90 > th dose independent rect. 15 17
967 164.08 temperature 30.0 90 < th dose dependent rect. 4 5
995 164.18 atmosphere 995.0 270 > th dose independent rect. 18 9
999 164.20 radiation 10.0 270 < th dose independent rect. 18 9