BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0153200 Os11g0153200|AK107061
(182 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0153200 Carbonic anhydrase, eukaryotic family protein 381 e-106
Os12g0153500 Carbonic anhydrase, eukaryotic family protein 242 1e-64
Os02g0533300 Carbonic anhydrase, eukaryotic family protein 187 3e-48
Os08g0423500 Carbonic anhydrase, eukaryotic family protein 127 3e-30
Os08g0424100 Carbonic anhydrase, eukaryotic family protein 124 3e-29
Os08g0423600 120 4e-28
Os08g0470200 Similar to Nectarin III 76 1e-14
AK108990 75 2e-14
Os08g0470700 Carbonic anhydrase, eukaryotic family protein 75 3e-14
AK108854 73 1e-13
>Os11g0153200 Carbonic anhydrase, eukaryotic family protein
Length = 182
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 1 MAQMEFEPDKVGTVTVNGKVYSFRRVHWHAPSEHTINGEKHPLELQMVHAAADGSLAVIA 60
MAQMEFEPDKVGTVTVNGKVYSFRRVHWHAPSEHTINGEKHPLELQMVHAAADGSLAVIA
Sbjct: 1 MAQMEFEPDKVGTVTVNGKVYSFRRVHWHAPSEHTINGEKHPLELQMVHAAADGSLAVIA 60
Query: 61 ILYKYGAPDSFYFQLKRKLAELAADGCSFGEENAQVALGLVHLRSLQKRTGSYFRYAGSL 120
ILYKYGAPDSFYFQLKRKLAELAADGCSFGEENAQVALGLVHLRSLQKRTGSYFRYAGSL
Sbjct: 61 ILYKYGAPDSFYFQLKRKLAELAADGCSFGEENAQVALGLVHLRSLQKRTGSYFRYAGSL 120
Query: 121 TAPPCTEDVFWSVLGKIRQISQEQVALITALLPAGGARPTQPLNGRTVQFYNPPNSTISF 180
TAPPCTEDVFWSVLGKIRQISQEQVALITALLPAGGARPTQPLNGRTVQFYNPPNSTISF
Sbjct: 121 TAPPCTEDVFWSVLGKIRQISQEQVALITALLPAGGARPTQPLNGRTVQFYNPPNSTISF 180
Query: 181 KV 182
KV
Sbjct: 181 KV 182
>Os12g0153500 Carbonic anhydrase, eukaryotic family protein
Length = 281
Score = 242 bits (617), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 133/173 (76%), Gaps = 1/173 (0%)
Query: 10 KVGTVTVNGKVYSFRRVHWHAPSEHTINGEKHPLELQMVHAA-ADGSLAVIAILYKYGAP 68
+VG V + GK Y F+ +HWHAPSEHTING + PLEL +VH + ADG LAVI++LYK GAP
Sbjct: 105 EVGQVIIAGKPYRFQAIHWHAPSEHTINGRRFPLELHLVHKSDADGGLAVISVLYKLGAP 164
Query: 69 DSFYFQLKRKLAELAADGCSFGEENAQVALGLVHLRSLQKRTGSYFRYAGSLTAPPCTED 128
DSFY Q K LAEL AD C F +E A VA GLV +RSLQKRTGSYFRY GSLT PPC E+
Sbjct: 165 DSFYLQFKDHLAELGADECDFSKEEAHVAAGLVQMRSLQKRTGSYFRYGGSLTTPPCGEN 224
Query: 129 VFWSVLGKIRQISQEQVALITALLPAGGARPTQPLNGRTVQFYNPPNSTISFK 181
V WSVLGK+R+ISQEQ+ L+ + LP ARP QPLNGR V +YNPP S +SF+
Sbjct: 225 VVWSVLGKVREISQEQLHLLMSPLPTKDARPAQPLNGRAVFYYNPPGSAVSFQ 277
>Os02g0533300 Carbonic anhydrase, eukaryotic family protein
Length = 266
Score = 187 bits (476), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 116/165 (70%), Gaps = 4/165 (2%)
Query: 9 DKVGTVTVNGKVYSFRRVHWHAPSEHTINGEKHPLELQMVHAAADGSLAVIAILYKYGAP 68
D GTV V+GK Y R++HWH+PSEHTING++ +EL MVH + DG++ VIA+LY++G P
Sbjct: 100 DTAGTVKVDGKKYKLRQLHWHSPSEHTINGQRFAVELHMVHHSDDGNITVIAVLYRHGKP 159
Query: 69 DSFYFQLKRKLAELAADGCSFGEENAQVALGLVHLRSLQKRTGSYFRYAGSLTAPPCTED 128
D F FQ+K KLA L +GC E+ + +GLV +R L+K YFRY GSLT PPCTE+
Sbjct: 160 DPFLFQIKDKLAALYLEGCK-AEKGEPLPVGLVDMRELKKGADRYFRYVGSLTTPPCTEN 218
Query: 129 VFWSVLGKIRQISQEQVALITALLPAG---GARPTQPLNGRTVQF 170
V W++ G+IR++++EQ A + A L RPTQPLNGRTVQ
Sbjct: 219 VIWNIFGEIREMTKEQAAALRAPLHGSYRHNRRPTQPLNGRTVQL 263
>Os08g0423500 Carbonic anhydrase, eukaryotic family protein
Length = 276
Score = 127 bits (320), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 96/173 (55%), Gaps = 9/173 (5%)
Query: 4 MEFEPDKVGTVTVNGKVYSFRRVHWHAPSEHTINGEKHPLELQMVHAAADGSLAVIAILY 63
+ F+ D G++ +NG Y R++HWH PSEHTI+G ++ +EL MVH A AVI ILY
Sbjct: 104 VRFDGD-AGSLKINGTAYQLRQMHWHTPSEHTIDGRRYDMELHMVHLNAQNQAAVIGILY 162
Query: 64 KYGAPDSFYFQLKRKLAELAADGCSFGEENAQVALGLVHLRSLQKRTGSYFRYAGSLTAP 123
G D F +L+ + E++ E +V +G + + Y+RY GS T P
Sbjct: 163 TIGTRDEFLQKLEPYIIEISKQ-----EGKERVIIGGADPNVAKGQDTVYYRYMGSFTTP 217
Query: 124 PCTEDVFWSVLGKIRQISQEQVALITALLPAG---GARPTQPLNGRTVQFYNP 173
PCTE V W+V+ K+R +S Q+ L+ A + G ARP Q +N R + + P
Sbjct: 218 PCTEGVIWTVVRKVRTVSLSQITLLKAAVLTGNENNARPLQGVNNREIDLFLP 270
>Os08g0424100 Carbonic anhydrase, eukaryotic family protein
Length = 277
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 8/163 (4%)
Query: 14 VTVNGKVYSFRRVHWHAPSEHTINGEKHPLELQMVHAAADGSLAVIAILYKYGAPDSFYF 73
+ +NG Y R+VHWHAPSEH ++G ++ +EL MVH AV+ ILY GA D F
Sbjct: 114 LVINGTAYRLRQVHWHAPSEHAVDGRRYDMELHMVHLNTQNQTAVVGILYAIGAQDEFLH 173
Query: 74 QLKRKLAELAADGCSFGEENAQVALGLVHLRSLQKRTGSYFRYAGSLTAPPCTEDVFWSV 133
+L+ + E+A ++ ++ G V ++ Y+RY GSLT PPCTE V W++
Sbjct: 174 KLEPYIIEVADQ-----KDKEKIVNGGVDPNVAKEHDIVYYRYMGSLTTPPCTEGVIWTI 228
Query: 134 LGKIRQISQEQVALITALLPAG---GARPTQPLNGRTVQFYNP 173
+ K+ +S Q+AL+ A + G ARP Q +N R + + P
Sbjct: 229 VRKVHTVSLSQLALLKAAVVNGNEKNARPLQDVNNRNIGLFIP 271
>Os08g0423600
Length = 276
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 10/174 (5%)
Query: 4 MEFEPDKVGTVTVNGKVYSFRRVHWHAPSEHTINGEKHPLELQMVHAAADGSLAVIAILY 63
+ F+ D G++ +NG Y R++HWH PSEHTI+G ++ +EL MVH A AVI ILY
Sbjct: 103 VRFDGD-AGSLKINGTAYQLRQMHWHTPSEHTIDGRRYDMELHMVHLNAQNQAAVIGILY 161
Query: 64 KYG-APDSFYFQLKRKLAELAADGCSFGEENAQVALGLVHLRSLQKRTGSYFRYAGSLTA 122
G PD F +++ + + S E ++ +G + + Y+RY GS T
Sbjct: 162 TIGTTPDEFLQKMEPYIIAI-----SNQEGKEKMVVGGADPNVAKGKDTVYYRYMGSFTT 216
Query: 123 PPCTEDVFWSVLGKIRQISQEQVALITALLPAG---GARPTQPLNGRTVQFYNP 173
PPCTE V W+V+ K+ +S Q+ L+ A + G ARP Q +N R + + P
Sbjct: 217 PPCTEGVIWTVVRKVHTVSLSQITLLKAAVLMGNENNARPLQDVNNREIDLFFP 270
>Os08g0470200 Similar to Nectarin III
Length = 218
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 6 FEPDKVGTVTVNGKVYSFRRVHWHAPSEHTINGEKHPLELQMVHAAADGSLAVIAILYKY 65
F+ D G+V +NG Y R++HWH+P+EH+++G ++ +EL MVH +A+ AVI +LY+
Sbjct: 106 FDGD-AGSVVINGTAYYLRQLHWHSPTEHSVDGRRYDMELHMVHESAEKKAAVIGLLYEV 164
Query: 66 GAPDSFYFQLKRKLAELA 83
G PD F +++ L +A
Sbjct: 165 GRPDRFLQKMEPYLKMIA 182
>AK108990
Length = 249
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 10/135 (7%)
Query: 12 GTVTVNGKVYSFRRVHWHAPSEHTINGEKHPLELQMVH-AAADGS-LAVIAILYKYGAPD 69
GT TV G + + H H PSEH INGE HPLE+ MVH AD + +AV+A++++ + +
Sbjct: 29 GTTTVAGSDFQLVQFHMHTPSEHHINGEYHPLEVHMVHQGVADPTQIAVVALMFQVASGE 88
Query: 70 SFYFQLKRKLAELAADGCSFGEENAQVAL--GLVHLRSLQK-RTGSYFRYAGSLTAPPCT 126
S + LA+ + +VA+ G+ L K + +Y+GSLT PPC
Sbjct: 89 S-----SSIIKSLASSVSTISTPGTKVAIPGGIDFTDVLAKVESSQMLQYSGSLTTPPCA 143
Query: 127 EDVFWSVLGKIRQIS 141
E V + ++ IS
Sbjct: 144 EGVTFMIVKDPLDIS 158
>Os08g0470700 Carbonic anhydrase, eukaryotic family protein
Length = 194
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 10 KVGTVTVNGKVYSFRRVHWHAPSEHTINGEKHPLELQMVHAAADGSLAVIAILYKYGAPD 69
G V +NGK Y +++HWH PSEHT+NG ++ +EL +VH + + AVI LY+ G PD
Sbjct: 106 NAGRVVINGKAYKLKQLHWHTPSEHTVNGRRYDMELHLVHDDGNSNTAVIGNLYQIGNPD 165
Query: 70 SFYFQL 75
F +
Sbjct: 166 PFLLMV 171
>AK108854
Length = 287
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 81/179 (45%), Gaps = 23/179 (12%)
Query: 12 GTVTVNGKVYSFRRVHWHAPSEHTINGEKHP-----LELQMVHAAADGS----LAVIAIL 62
G +G+ Y ++V++HAPSEHTIN E + +E ++H S LA + IL
Sbjct: 109 GCNPCDGQKYHVKQVNFHAPSEHTINTEPYKDGHYVMETHIIHQKEGSSGLNDLATVVIL 168
Query: 63 YKYGAPDSFY--FQLKRKLAELAADGCSFGEENAQVALGLVHLRSLQKRTGSYFRYAGSL 120
+ P F F A AD +V LG + + G Y+ Y GSL
Sbjct: 169 WYKQQPGGFPNPFLESIDWANAPADTTRHTTIQNKVRLG----KLKEAFDGEYYSYLGSL 224
Query: 121 TAPPCTEDVFWSVLGKIRQISQEQVALITALLPA--------GGARPTQPLNGRTVQFY 171
PPCTE V + V+ + I+++Q+ + AL G R QP+N R V +Y
Sbjct: 225 PVPPCTESVQYFVMKRPLGITEKQLDTVQALFQKNPNFANGHGNHRDVQPVNDRKVWYY 283
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,820,733
Number of extensions: 268682
Number of successful extensions: 515
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 508
Number of HSP's successfully gapped: 10
Length of query: 182
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 87
Effective length of database: 12,075,471
Effective search space: 1050565977
Effective search space used: 1050565977
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 153 (63.5 bits)