BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os11g0132000 Os11g0132000|AK099668
         (79 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os11g0132000  Similar to Arabinoxylan arabinofuranohydrolase...   166   5e-42
Os12g0128800  Similar to Arabinoxylan arabinofuranohydrolase...    94   2e-20
Os12g0128700  Similar to Arabinoxylan arabinofuranohydrolase...    90   4e-19
Os11g0131900  Similar to Arabinoxylan arabinofuranohydrolase...    89   1e-18
Os11g0132600  Similar to Arabinoxylan arabinofuranohydrolase...    84   2e-17
Os07g0686900  Similar to Alpha-L-arabinofuranosidase               77   4e-15

>Os11g0132000 Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II
          Length = 79

 Score =  166 bits (419), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 79/79 (100%), Positives = 79/79 (100%)

Query: 1  GIAFIVIPCLLFRNTLIFLLQDAIDSLEFARGSKESTWGSVRAAMGHPEPFPLKYVALGN 60
          GIAFIVIPCLLFRNTLIFLLQDAIDSLEFARGSKESTWGSVRAAMGHPEPFPLKYVALGN
Sbjct: 1  GIAFIVIPCLLFRNTLIFLLQDAIDSLEFARGSKESTWGSVRAAMGHPEPFPLKYVALGN 60

Query: 61 EDCEIFKPTYQGICKRVCC 79
          EDCEIFKPTYQGICKRVCC
Sbjct: 61 EDCEIFKPTYQGICKRVCC 79



>Os12g0128800 Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-I
          Length = 571

 Score = 94.0 bits (232), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/53 (75%), Positives = 45/53 (84%)

Query: 19  LLQDAIDSLEFARGSKESTWGSVRAAMGHPEPFPLKYVALGNEDCEIFKPTYQ 71
            ++DA DSLEFA+GS +STWGSVRA MGHPEPFPLKYVALGNEDC  FK  Y+
Sbjct: 257 FIKDATDSLEFAKGSDKSTWGSVRATMGHPEPFPLKYVALGNEDCAPFKLIYR 309



>Os12g0128700 Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II
          Length = 660

 Score = 89.7 bits (221), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/54 (72%), Positives = 46/54 (85%), Gaps = 2/54 (3%)

Query: 19  LLQDAIDSLEFARGSKESTWGSVRAAMGHPEPFPLKYVALGNEDCEIFKPTYQG 72
            ++D +DSLEFARGS +STWGSVRAAMGHPEPFP+KYVA+GNEDC   K  Y+G
Sbjct: 340 FVKDVLDSLEFARGSADSTWGSVRAAMGHPEPFPVKYVAIGNEDCG--KKFYRG 391



>Os11g0131900 Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II
          Length = 658

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/54 (70%), Positives = 46/54 (85%), Gaps = 2/54 (3%)

Query: 19  LLQDAIDSLEFARGSKESTWGSVRAAMGHPEPFPLKYVALGNEDCEIFKPTYQG 72
            ++D +DSLEFARG+ +STWGSVRAAMGHPEPFP+KYVA+GNEDC   K  Y+G
Sbjct: 338 FVKDVLDSLEFARGNADSTWGSVRAAMGHPEPFPVKYVAIGNEDCG--KKFYRG 389



>Os11g0132600 Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II
          Length = 657

 Score = 84.0 bits (206), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/54 (72%), Positives = 45/54 (83%), Gaps = 2/54 (3%)

Query: 19  LLQDAIDSLEFARGSKESTWGSVRAAMGHPEPFPLKYVALGNEDCEIFKPTYQG 72
            ++D +DSLEFARG  ESTWGSVRAAMGHPE FPLKYVA+GNEDC+  K  Y+G
Sbjct: 335 FVKDVLDSLEFARGRAESTWGSVRAAMGHPERFPLKYVAIGNEDCD--KGFYRG 386



>Os07g0686900 Similar to Alpha-L-arabinofuranosidase
          Length = 424

 Score = 76.6 bits (187), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/59 (52%), Positives = 46/59 (77%), Gaps = 2/59 (3%)

Query: 15  TLIFLLQDAIDSLEFARGSKESTWGSVRAAMGHPEPFPLKYVALGNEDCEI--FKPTYQ 71
           T+  L++D +D +EFARG  ++TWGSVRAAMGHP+PF L YV++GN++C +  ++  YQ
Sbjct: 99  TIASLVKDVVDGIEFARGGPKTTWGSVRAAMGHPQPFNLDYVSIGNQECWMLYYRGNYQ 157



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.328    0.145    0.474 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,709,599
Number of extensions: 94459
Number of successful extensions: 260
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 260
Number of HSP's successfully gapped: 6
Length of query: 79
Length of database: 17,035,801
Length adjustment: 50
Effective length of query: 29
Effective length of database: 14,425,101
Effective search space: 418327929
Effective search space used: 418327929
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 149 (62.0 bits)