Os11g0132600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II.
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Os11g0132600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.28 | 0.444 | 9.02 | -0.181 | 1.69 | 0.909 | 0.456 | 1.39 | 0.555 | 19.7 | 25.4 | 238 | -- | -- |
| 92.51 | 0.448 | 9 | -0.00617 | 1.66 | 0.906 | 0.243 | -- | 0.636 | 19.8 | 25.7 | 220 | -- | -- |
| 89.84 | 0.441 | 9.02 | -0.184 | 1.7 | 0.906 | -- | 1.38 | 0.553 | 19.7 | 25.42 | 222 | -- | -- |
| 92.53 | 0.448 | 9 | 0.00723 | 1.67 | 0.903 | -- | -- | 0.642 | 19.6 | 25.8 | 207 | -- | -- |
| 228.92 | 0.709 | 8.98 | -0.165 | -- | 1.06 | -- | 1.38 | 0.518 | -- | 23.8 | 1576 | -- | -- |
| 101.2 | 0.472 | 9.03 | -0.164 | 1.62 | -- | 0.374 | -- | 0.434 | 20 | -- | -- | -- | -- |
| 101.62 | 0.472 | 9.03 | -0.174 | 1.62 | -- | -- | -- | 0.435 | 20 | -- | -- | -- | -- |
| 232.11 | 0.713 | 8.96 | 0.00704 | -- | 0.917 | -- | -- | 0.552 | -- | 23.8 | 1576 | -- | -- |
| 92.44 | 0.448 | 8.98 | -- | 1.68 | 0.883 | -- | -- | 0.645 | 19.7 | 25.8 | 208 | -- | -- |
| 245.05 | 0.731 | 8.99 | -0.19 | -- | -- | -- | -- | 0.414 | -- | -- | -- | -- | -- |
| 102.42 | 0.473 | 9.03 | -- | 1.62 | -- | -- | -- | 0.454 | 20 | -- | -- | -- | -- |
| 232.11 | 0.712 | 8.96 | -- | -- | 0.915 | -- | -- | 0.551 | -- | 23.8 | 1576 | -- | -- |
| 246.01 | 0.732 | 8.99 | -- | -- | -- | -- | -- | 0.435 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.54 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 13 | 79.01 | temperature | 20 | 90 | > th | dose dependent | sin | 7 | NA |
| 28 | 80.51 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 39 | 81.06 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 11 |
| 46 | 81.22 | temperature | 25 | 270 | > th | dose independent | rect. | 20 | 14 |
| 69 | 81.83 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 12 |
| 104 | 82.80 | temperature | 25 | 270 | < th | dose independent | rect. | 21 | 12 |
| 119 | 83.08 | temperature | 25 | 270 | < th | dose independent | sin | 9 | NA |
| 126 | 83.17 | temperature | 25 | 270 | > th | dose independent | sin | 9 | NA |
| 305 | 85.74 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 324 | 85.95 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 14 |
| 330 | 85.99 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 2 |
| 440 | 86.73 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 3 |
| 463 | 86.84 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 478 | 86.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 5 |
| 497 | 87.10 | humidity | 70 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 499 | 87.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 503 | 87.12 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 504 | 87.12 | radiation | 1 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 507 | 87.13 | temperature | 20 | 720 | > th | dose dependent | rect. | 24 | 1 |
| 512 | 87.15 | humidity | 60 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 513 | 87.15 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 514 | 87.16 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 540 | 87.27 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 7 |
| 542 | 87.28 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 16 |
| 564 | 87.36 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 570 | 87.40 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 581 | 87.44 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 594 | 87.47 | radiation | 40 | 4320 | < th | dose dependent | rect. | 17 | 11 |
| 599 | 87.49 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 600 | 87.49 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 618 | 87.53 | radiation | 20 | 4320 | < th | dose dependent | rect. | 17 | 9 |
| 622 | 87.53 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 14 | 14 |
| 633 | 87.54 | humidity | 70 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 638 | 87.55 | radiation | 20 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 641 | 87.55 | radiation | 20 | 4320 | < th | dose dependent | rect. | 17 | 7 |
| 666 | 87.58 | radiation | 20 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 687 | 87.62 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 16 | NA |
| 696 | 87.63 | humidity | 60 | 43200 | > th | dose independent | rect. | 21 | 12 |
| 722 | 87.67 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 768 | 87.75 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 22 |
| 798 | 87.81 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 5 |
| 799 | 87.81 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 819 | 87.85 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 836 | 87.89 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 883 | 87.96 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 901 | 87.99 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 4 |