Os12g0128700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II.
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Os12g0128700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.72 | 0.494 | 10.4 | -1.03 | 0.981 | 0.69 | 0.737 | -2.29 | -0.708 | 21.7 | 23.62 | 17733 | -- | -- |
| 124.18 | 0.519 | 10.4 | -0.648 | 0.98 | 0.7 | 0.825 | -- | -0.413 | 21.7 | 19.42 | 43857 | -- | -- |
| 112.77 | 0.495 | 10.4 | -1.04 | 0.971 | 0.691 | -- | -2.29 | -0.708 | 21.7 | 23.03 | 17720 | -- | -- |
| 124.77 | 0.52 | 10.4 | -0.801 | 0.994 | 0.661 | -- | -- | -0.641 | 21.7 | 21.69 | 20588 | -- | -- |
| 167.68 | 0.603 | 10.4 | -1.04 | -- | 0.76 | -- | -2.23 | -0.719 | -- | 22.7 | 18266 | -- | -- |
| 136.49 | 0.548 | 10.4 | -0.995 | 0.992 | -- | 0.759 | -- | -0.465 | 21.7 | -- | -- | -- | -- |
| 138.65 | 0.551 | 10.4 | -1.02 | 0.99 | -- | -- | -- | -0.466 | 21.6 | -- | -- | -- | -- |
| 175.08 | 0.616 | 10.4 | -0.65 | -- | 0.95 | -- | -- | -0.595 | -- | 47.91 | 11002 | -- | -- |
| 136.4 | 0.544 | 10.4 | -- | 0.989 | 1.12 | -- | -- | -0.29 | 21.7 | 18.9 | 47520 | -- | -- |
| 196.68 | 0.655 | 10.4 | -1.01 | -- | -- | -- | -- | -0.468 | -- | -- | -- | -- | -- |
| 166.24 | 0.603 | 10.4 | -- | 0.988 | -- | -- | -- | -0.352 | 21.5 | -- | -- | -- | -- |
| 169.7 | 0.607 | 10.3 | -- | -- | 1.34 | -- | -- | -0.322 | -- | 53.47 | 19822 | -- | -- |
| 223.85 | 0.698 | 10.4 | -- | -- | -- | -- | -- | -0.355 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.43 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 2 | 106.45 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 3 | 106.50 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 4 | 106.51 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 6 | 106.88 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 7 | 106.94 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 8 | 106.99 | radiation | 40 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 9 | 107.02 | radiation | 40 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 12 | 107.14 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 30 | 108.35 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 31 | 108.50 | radiation | 20 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 39 | 108.69 | wind | 1 | 43200 | < th | dose dependent | rect. | 17 | 8 |
| 43 | 108.99 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 52 | 109.53 | radiation | 20 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 66 | 110.25 | radiation | 10 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 68 | 110.28 | radiation | 10 | 43200 | < th | dose dependent | rect. | 6 | 10 |
| 71 | 110.36 | radiation | 20 | 14400 | > th | dose independent | sin | 12 | NA |
| 72 | 110.36 | radiation | 10 | 43200 | < th | dose dependent | rect. | 6 | 7 |
| 80 | 110.45 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 83 | 110.48 | radiation | 10 | 43200 | < th | dose dependent | rect. | 7 | 17 |
| 98 | 110.60 | radiation | 20 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 102 | 110.65 | radiation | 10 | 43200 | < th | dose dependent | sin | 0 | NA |
| 112 | 110.75 | radiation | 10 | 43200 | < th | dose dependent | rect. | 23 | 17 |
| 140 | 110.87 | radiation | 20 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 143 | 110.89 | radiation | 20 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 165 | 111.02 | radiation | 20 | 14400 | > th | dose dependent | sin | 13 | NA |
| 181 | 111.08 | radiation | 20 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 236 | 111.21 | radiation | 20 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 254 | 111.26 | humidity | 50 | 43200 | > th | dose independent | sin | 12 | NA |
| 255 | 111.26 | radiation | 20 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 271 | 111.28 | radiation | 40 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 292 | 111.31 | radiation | 20 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 304 | 111.35 | radiation | 40 | 14400 | < th | dose independent | rect. | 13 | 19 |
| 305 | 111.35 | radiation | 20 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 356 | 111.48 | radiation | 10 | 43200 | < th | dose dependent | no | NA | NA |
| 419 | 111.51 | radiation | 40 | 14400 | < th | dose independent | rect. | 13 | 12 |
| 439 | 111.53 | radiation | 20 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 442 | 111.53 | radiation | 10 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 466 | 111.58 | radiation | 30 | 14400 | < th | dose independent | sin | 13 | NA |
| 469 | 111.59 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 516 | 111.67 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 529 | 111.69 | radiation | 30 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 594 | 111.77 | radiation | 30 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 609 | 111.78 | radiation | 30 | 14400 | < th | dose independent | no | NA | NA |
| 690 | 111.78 | radiation | 30 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 731 | 111.80 | radiation | 20 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 746 | 111.84 | radiation | 30 | 14400 | < th | dose independent | sin | 3 | NA |
| 751 | 111.85 | radiation | 30 | 14400 | < th | dose independent | sin | 1 | NA |
| 766 | 111.87 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 811 | 111.89 | radiation | 10 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 823 | 111.92 | radiation | 20 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 894 | 111.99 | humidity | 60 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 898 | 111.99 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 19 |
| 911 | 112.00 | radiation | 30 | 14400 | < th | dose dependent | rect. | 17 | 14 |
| 991 | 112.07 | radiation | 20 | 14400 | > th | dose dependent | rect. | 9 | 1 |