BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0128700 Os12g0128700|AK072576
         (660 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10740.1  | chr3:3361031-3364573 REVERSE LENGTH=679            856   0.0  
AT5G26120.1  | chr5:9121835-9125399 REVERSE LENGTH=675            827   0.0  

>AT3G10740.1 | chr3:3361031-3364573 REVERSE LENGTH=679
          Length = 678

 Score =  856 bits (2211), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/621 (65%), Positives = 488/621 (78%), Gaps = 6/621 (0%)

Query: 41  LKVDASLQHARQIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGPHTPSNIDPWSII 100
           L+VDAS    R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG +TPSNI PWSI+
Sbjct: 43  LQVDASNGGGRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQNTPSNIWPWSIV 102

Query: 101 GDDSSIFVATDRTSCFSRNTVALRMEVLCDN--CPAGGVGIYNPGFWGMNIEDGKTYNLV 158
           GD SSI+VATDR+SCF RN +ALRM+VLCD+  CP+GGVG+YNPG+WGMNIE+GK Y + 
Sbjct: 103 GDHSSIYVATDRSSCFERNKIALRMDVLCDSKGCPSGGVGVYNPGYWGMNIEEGKKYKVA 162

Query: 159 MYVKSPETVELTVSLTSSDGSQNLASSTIPVSGA--SNWTKLEQKLVAKGTNRTSRLQIT 216
           +YV+S   ++L+VSLTSS+GS+ LAS  I  S +  S W K E  L AK T+ ++RLQ+T
Sbjct: 163 LYVRSTGDIDLSVSLTSSNGSRTLASEKIIASASDVSKWIKKEVLLEAKATDPSARLQLT 222

Query: 217 TTKKGVVWFDQVSLMSADTYKGHGFRTELISMMLDLKPRFLRFPGGCFVEGEWLRNAFRW 276
           TTKKG +W DQVS M  DT+KGHGFR +L  MM D+KPRF+RFPGGCFVEGEWL NAFRW
Sbjct: 223 TTKKGSIWIDQVSAMPVDTHKGHGFRNDLFQMMADIKPRFIRFPGGCFVEGEWLSNAFRW 282

Query: 277 RESIGPWEERPGHFGDVWHYWTDDGLGYYEFLQLSEDLGAAPIWVFNNGISHNDEVDTAA 336
           +E++GPWEERPGHFGDVW YWTDDGLG++EF Q++ED+GAAPIWVFNNGISHNDEV+TA+
Sbjct: 283 KETVGPWEERPGHFGDVWKYWTDDGLGHFEFFQMAEDIGAAPIWVFNNGISHNDEVETAS 342

Query: 337 IAPFVKDVLDSLEFARGSADSTWGSVRAAMGHPEPFPVKYVAIGNEDCGKKFYRGNYLKF 396
           I PFV++ LD +EFARG A+STWGSVRA MG  EPF +KYVAIGNEDCGK +YRGNY+ F
Sbjct: 343 IMPFVQEALDGIEFARGDANSTWGSVRAKMGRQEPFELKYVAIGNEDCGKTYYRGNYIVF 402

Query: 397 YNAIREAYPDIQMISNCDASSRPLDHPADLYDFHVYTDSKTLFSMKSAFDRSSRNGPKAF 456
           Y+AI++AYPDI++ISNCD SS PLDHPAD YD+H+YT +  LFSM   FDR+SR GPKAF
Sbjct: 403 YDAIKKAYPDIKIISNCDGSSHPLDHPADYYDYHIYTSASNLFSMYHQFDRTSRKGPKAF 462

Query: 457 VSEYAVWRSDAGRGXXXXXXXXXXXXTGLEKNSDVVQMASYAPLFVNNNDQTWNPDAIVF 516
           VSEYAV   DAG G             GLEKNSD+V+MASYAPLFVN ND+ WNPDAIVF
Sbjct: 463 VSEYAVTGKDAGTGSLLASLAEAAFLIGLEKNSDIVEMASYAPLFVNTNDRRWNPDAIVF 522

Query: 517 NSWQQYGTPSYWMQTLFRESSGAMFHPITITSSYSGSLAASAITWQDSENSFLRVKIINF 576
           NS   YGTPSYW+Q  F ESSGA     T+  + S SL ASAI+W+++   ++R+K +NF
Sbjct: 523 NSSHLYGTPSYWVQRFFAESSGATLLTSTLKGN-STSLVASAISWKNNGKDYIRIKAVNF 581

Query: 577 GSDPVSLTISATGLQARVNAL-GSTATVITSSNVMDENSFSNPNKVVPVKSQLSNAAEQM 635
           G++  ++ +  TGL   V  + GS  TV+TS+NVMDENSFS P KVVP +S L  A E M
Sbjct: 582 GANSENMQVLVTGLDPNVMRVSGSKKTVLTSTNVMDENSFSQPEKVVPHESLLELAEEDM 641

Query: 636 QVTLAPHSFSSFDLALAQSKL 656
            V L PHSFSSFDL    +K+
Sbjct: 642 TVVLPPHSFSSFDLLKESAKI 662



>AT5G26120.1 | chr5:9121835-9125399 REVERSE LENGTH=675
          Length = 674

 Score =  827 bits (2135), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/625 (63%), Positives = 483/625 (77%), Gaps = 9/625 (1%)

Query: 41  LKVDASLQHARQIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGPHTPSNIDPWSII 100
           L+VDAS    R IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG   PSNI PWSII
Sbjct: 42  LQVDASNVTRRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQIIPSNIWPWSII 101

Query: 101 GDDSSIFVATDRTSCFSRNTVALRMEVLCDN--CPAGGVGIYNPGFWGMNIEDGKTYNLV 158
           GD+SSI+V TDR+SCF RN +ALRMEVLCD+  CP GGVG+YNPG+WGMNIE+GK Y +V
Sbjct: 102 GDESSIYVVTDRSSCFERNKIALRMEVLCDSNSCPLGGVGVYNPGYWGMNIEEGKKYKVV 161

Query: 159 MYVKSPETVELTVSLTSSDGSQNLASSTIPV--SGASNWTKLEQKLVAKGTNRTSRLQIT 216
           +YV+S   ++++VS TSS+GS  LAS  I    S   NWTK E  L A GT+  +RLQ T
Sbjct: 162 LYVRSTGDIDVSVSFTSSNGSVTLASENIIALASDLLNWTKKEMLLEANGTDNGARLQFT 221

Query: 217 TTKKGVVWFDQVSLMSADTYKGHGFRTELISMMLDLKPRFLRFPGGCFVEGEWLRNAFRW 276
           TTKKG +WFDQVS M  DTYKGHGFR +L  MM+DLKPRF+RFPGGCFVEG+WL NAFRW
Sbjct: 222 TTKKGSIWFDQVSAMPMDTYKGHGFRNDLFQMMVDLKPRFIRFPGGCFVEGDWLGNAFRW 281

Query: 277 RESIGPWEERPGHFGDVWHYWTDDGLGYYEFLQLSEDLGAAPIWVFNNGISHNDEVDTAA 336
           +E++  WEERPGH+GDVW YWTDDGLG++EF QL+EDLGA+PIWVFNNGISHND+V+T  
Sbjct: 282 KETVRAWEERPGHYGDVWKYWTDDGLGHFEFFQLAEDLGASPIWVFNNGISHNDQVETKN 341

Query: 337 IAPFVKDVLDSLEFARGSADSTWGSVRAAMGHPEPFPVKYVAIGNEDCGKKFYRGNYLKF 396
           + PFV++ +D +EFARG ++STWGSVRAAMGHPEPF +KYVA+GNEDC K +YRGNYL+F
Sbjct: 342 VMPFVQEAIDGIEFARGDSNSTWGSVRAAMGHPEPFELKYVAVGNEDCFKSYYRGNYLEF 401

Query: 397 YNAIREAYPDIQMISNCDASSRPLDHPADLYDFHVYTDSKTLFSMKSAFDRSSRNGPKAF 456
           YNAI++AYPDI++ISNCDAS++PLDHPAD +D+H+YT ++ LFS    FD + RNGPKAF
Sbjct: 402 YNAIKKAYPDIKIISNCDASAKPLDHPADYFDYHIYTLARDLFSKSHDFDNTPRNGPKAF 461

Query: 457 VSEYAVWRSDAGRGXXXXXXXXXXXXTGLEKNSDVVQMASYAPLFVNNNDQTWNPDAIVF 516
           VSEYAV ++DA  G             GLEKNSD+V+M SYAPLFVN ND+ W PDAIVF
Sbjct: 462 VSEYAVNKADAKNGNLLAALGEAAFLLGLEKNSDIVEMVSYAPLFVNTNDRRWIPDAIVF 521

Query: 517 NSWQQYGTPSYWMQTLFRESSGAMFHPITITSSYSGSLAASAITWQDSENSFLRVKIINF 576
           NS   YGTPSYW+Q  F ESSGA     T+    S S+ ASAI++Q +   ++++K +NF
Sbjct: 522 NSSHLYGTPSYWVQHFFTESSGATLLNSTLKGKTS-SVEASAISFQTNGKDYIQIKAVNF 580

Query: 577 GSDPVSLTISATGLQARVNALGSTATVITSSNVMDENSFSNPNKVVPVKSQLS-NAAEQM 635
           G   V+L ++ TGL A+    GS   V+TS++VMDENSFSNPN +VP +S L     E +
Sbjct: 581 GEQSVNLKVAVTGLMAKF--YGSKKKVLTSASVMDENSFSNPNMIVPQESLLEMTEQEDL 638

Query: 636 QVTLAPHSFSSFDLALAQSKLVAEM 660
              L PHSFSSFDL L +S+ V +M
Sbjct: 639 MFVLPPHSFSSFDL-LTESENVIKM 662



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.132    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,124,404
Number of extensions: 605902
Number of successful extensions: 1310
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1301
Number of HSP's successfully gapped: 2
Length of query: 660
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 555
Effective length of database: 8,227,889
Effective search space: 4566478395
Effective search space used: 4566478395
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)