Os07g0686900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Alpha-L-arabinofuranosidase.
FiT-DB / Search/ Help/ Sample detail
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Os07g0686900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Alpha-L-arabinofuranosidase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 287.93 | 0.797 | 4.28 | -0.853 | 1.09 | 1.84 | -1.38 | 5.21 | -0.199 | 22.9 | 90 | 4431 | 8.13 | 1.02 |
| 317.75 | 0.83 | 4.28 | -0.613 | 1.09 | 2.04 | -1.46 | -- | -0.0902 | 23 | 88.05 | 4460 | 7.67 | 1.28 |
| 286.74 | 0.789 | 4.25 | -0.693 | 1.1 | 1.82 | -- | 5.55 | -0.0982 | 23.3 | 90.4 | 4408 | 8.6 | 0.317 |
| 325.63 | 0.84 | 4.26 | -0.607 | 1.15 | 2.17 | -- | -- | -0.0502 | 23.3 | 88 | 4492 | 7.69 | 1.23 |
| 357.69 | 0.881 | 4.25 | -0.688 | -- | 1.78 | -- | 5.71 | -0.102 | -- | 90.74 | 4483 | 8.6 | 0.317 |
| 384.04 | 0.919 | 4.35 | -0.568 | 1.1 | -- | -1.44 | -- | -0.425 | 23 | -- | -- | -- | -- |
| 392.12 | 0.927 | 4.34 | -0.514 | 1.1 | -- | -- | -- | -0.423 | 23.4 | -- | -- | -- | -- |
| 404.98 | 0.937 | 4.26 | -0.61 | -- | 2.15 | -- | -- | -0.0608 | -- | 88 | 4427 | 7.86 | 1.05 |
| 335.08 | 0.853 | 4.24 | -- | 1.13 | 2.15 | -- | -- | 0.0223 | 23.2 | 88.05 | 4505 | 7.7 | 1.23 |
| 468.53 | 1.01 | 4.32 | -0.485 | -- | -- | -- | -- | -0.412 | -- | -- | -- | -- | -- |
| 399.08 | 0.934 | 4.33 | -- | 1.1 | -- | -- | -- | -0.366 | 23.4 | -- | -- | -- | -- |
| 413.59 | 0.947 | 4.22 | -- | -- | 2.11 | -- | -- | 0.015 | -- | 88.31 | 4427 | 7.75 | 1.2 |
| 474.73 | 1.02 | 4.3 | -- | -- | -- | -- | -- | -0.358 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 288.77 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 2 | 289.63 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 4 | 291.27 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 11 | 293.64 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 15 | 294.99 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 24 | 297.44 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 25 | 297.48 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 35 | 299.15 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 39 | 300.14 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 41 | 300.56 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 43 | 300.57 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 4 |
| 46 | 301.20 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 48 | 301.35 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 49 | 301.43 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 51 | 301.97 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 57 | 302.55 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 79 | 304.08 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 91 | 304.97 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 100 | 305.79 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 21 | 11 |
| 101 | 305.82 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 126 | 307.01 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 163 | 307.88 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 9 | 5 |
| 175 | 308.18 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 21 | 10 |
| 254 | 310.25 | wind | 3.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 258 | 310.35 | wind | 3.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 270 | 310.55 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 10 | 5 |
| 288 | 310.93 | temperature | 25.0 | 720 | > th | dose independent | rect. | 23 | 1 |
| 306 | 311.19 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 307 | 311.20 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 310 | 311.27 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 313 | 311.33 | wind | 3.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 360 | 311.89 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 10 | 5 |
| 368 | 312.05 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 531 | 314.15 | temperature | 25.0 | 720 | > th | dose independent | rect. | 21 | 3 |
| 548 | 314.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 555 | 314.40 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 556 | 314.40 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 12 | 2 |
| 585 | 314.67 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 9 |
| 616 | 315.08 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 641 | 315.36 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 659 | 315.52 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 695 | 315.85 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 767 | 316.59 | wind | 1.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 887 | 317.51 | temperature | 20.0 | 720 | > th | dose dependent | sin | 14 | NA |