Os12g0128800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-I.
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Os12g0128800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-I.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.5 | 0.411 | 6.38 | -1 | 0.353 | -0.0174 | 0.672 | 1.75 | 0.243 | 3.97 | 19.4 | 855 | -- | -- |
| 80.86 | 0.419 | 6.35 | -0.87 | 0.331 | -0.619 | 0.299 | -- | 0.255 | 3.67 | 18 | 1107 | -- | -- |
| 77.28 | 0.409 | 6.38 | -0.978 | 0.364 | 0.0294 | -- | 1.8 | 0.252 | 3.76 | 19.2 | 665 | -- | -- |
| 79.68 | 0.416 | 6.34 | -0.834 | 0.296 | -0.756 | -- | -- | 0.285 | 3.68 | 17.19 | 2334 | -- | -- |
| 84.66 | 0.429 | 6.38 | -0.966 | -- | -0.0214 | -- | 1.7 | 0.259 | -- | 19.2 | 716 | -- | -- |
| 85.02 | 0.432 | 6.32 | -0.663 | 0.359 | -- | 0.46 | -- | 0.345 | 4.14 | -- | -- | -- | -- |
| 85.53 | 0.433 | 6.33 | -0.668 | 0.36 | -- | -- | -- | 0.342 | 3.73 | -- | -- | -- | -- |
| 85.43 | 0.43 | 6.34 | -0.868 | -- | -0.869 | -- | -- | 0.274 | -- | 17.2 | 2464 | -- | -- |
| 94.77 | 0.453 | 6.31 | -- | 0.357 | -1.13 | -- | -- | 0.41 | 3.58 | 14.38 | 491 | -- | -- |
| 92.71 | 0.45 | 6.33 | -0.653 | -- | -- | -- | -- | 0.352 | -- | -- | -- | -- | -- |
| 97.3 | 0.461 | 6.31 | -- | 0.347 | -- | -- | -- | 0.417 | 3.75 | -- | -- | -- | -- |
| 101.87 | 0.472 | 6.31 | -- | -- | -1.03 | -- | -- | 0.419 | -- | 14.41 | 460 | -- | -- |
| 103.96 | 0.476 | 6.31 | -- | -- | -- | -- | -- | 0.424 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.07 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 12 | 18 |
| 25 | 76.42 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 22 | 22 |
| 31 | 76.48 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 19 |
| 41 | 76.55 | temperature | 20.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 48 | 76.58 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 3 | 15 |
| 54 | 76.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 56 | 76.62 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 9 |
| 58 | 76.62 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 21 |
| 63 | 76.64 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 9 |
| 68 | 76.67 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 21 |
| 74 | 76.69 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 85 | 76.72 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 86 | 76.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 87 | 76.72 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 10 |
| 90 | 76.73 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 114 | 76.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 115 | 76.77 | temperature | 20.0 | 720 | < th | dose independent | rect. | 6 | 21 |
| 116 | 76.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 120 | 76.77 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 126 | 76.78 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 138 | 76.81 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 139 | 76.81 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 19 |
| 146 | 76.81 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 155 | 76.83 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 175 | 76.86 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 179 | 76.87 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 180 | 76.87 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 205 | 76.90 | temperature | 20.0 | 720 | < th | dose independent | rect. | 24 | 22 |
| 210 | 76.91 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 212 | 76.91 | temperature | 10.0 | 720 | > th | dose dependent | no | NA | NA |
| 213 | 76.91 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 4 |
| 227 | 76.92 | temperature | 20.0 | 720 | < th | dose dependent | no | NA | NA |
| 239 | 76.93 | temperature | 10.0 | 720 | > th | dose dependent | sin | 2 | NA |
| 240 | 76.93 | temperature | 30.0 | 720 | < th | dose dependent | no | NA | NA |
| 246 | 76.93 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 275 | 76.97 | temperature | 20.0 | 720 | < th | dose independent | rect. | 10 | 22 |
| 277 | 76.97 | temperature | 30.0 | 720 | < th | dose dependent | sin | 1 | NA |
| 299 | 76.99 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 301 | 76.99 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 336 | 77.03 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 360 | 77.05 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 23 |
| 386 | 77.07 | temperature | 20.0 | 720 | > th | dose independent | rect. | 22 | 22 |
| 399 | 77.08 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 415 | 77.10 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 22 |
| 416 | 77.10 | temperature | 20.0 | 720 | > th | dose independent | rect. | 24 | 23 |
| 457 | 77.13 | temperature | 20.0 | 720 | < th | dose independent | no | NA | NA |
| 472 | 77.14 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 4 |
| 519 | 77.18 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 17 |
| 528 | 77.18 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 16 | 23 |
| 530 | 77.19 | temperature | 20.0 | 720 | > th | dose independent | rect. | 11 | 16 |
| 532 | 77.19 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 23 |
| 547 | 77.20 | temperature | 20.0 | 720 | > th | dose independent | no | NA | NA |
| 609 | 77.24 | temperature | 20.0 | 720 | < th | dose independent | rect. | 15 | 23 |
| 628 | 77.26 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 650 | 77.28 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 7 | 16 |
| 728 | 77.34 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 23 |
| 759 | 77.37 | temperature | 20.0 | 720 | < th | dose dependent | sin | 20 | NA |
| 791 | 77.41 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 805 | 77.42 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 23 |
| 821 | 77.44 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 860 | 77.48 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 910 | 77.53 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 925 | 77.55 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 5 |
| 940 | 77.57 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 16 | 7 |
| 956 | 77.58 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 12 | 12 |
| 996 | 77.61 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 15 | 15 |