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Os11g0132000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.5 (0.0202) R2 : 0.45
β1 : -1.06 (0.074) R2dD : 0.257 R2D : 0.269
β2 : 0.577 (0.0528) R2dC : 0.145 R2C : 0.134
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.185 (0.0432) R2dN8 : 0.0297 R2N8 : 0.0547
σ : 0.38
deviance : 65.9
__
_____
C
peak time of C : 5.68
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
58.66 0.36 7.54 -1.34 0.565 -0.351 0.356 1.66 0.0931 5.82 20.6 1066 -- --
59.85 0.36 7.53 -1.37 0.565 -0.73 0.226 -- 0.0766 5.6 19.43 3498 -- --
58.95 0.358 7.54 -1.34 0.569 -0.364 -- 1.6 0.0883 5.89 20.67 1047 -- --
58.56 0.356 7.53 -1.34 0.553 -0.966 -- -- 0.0864 5.99 18.79 2370 -- --
75.56 0.405 7.55 -1.34 -- -0.434 -- 1.58 0.0997 -- 20.62 1117 -- --
65.78 0.38 7.5 -1.06 0.576 -- 0.224 -- 0.186 5.69 -- -- -- --
65.9 0.38 7.5 -1.06 0.577 -- -- -- 0.185 5.68 -- -- -- --
74.56 0.402 7.53 -1.35 -- -1.01 -- -- 0.0943 -- 18.7 2516 -- --
95.18 0.454 7.47 -- 0.56 0.194 -- -- 0.323 5.74 21.4 1890 -- --
83.2 0.426 7.51 -1.04 -- -- -- -- 0.199 -- -- -- -- --
95.61 0.457 7.48 -- 0.561 -- -- -- 0.303 5.76 -- -- -- --
95.44 0.455 7.44 -- -- 0.654 -- -- 0.507 -- 27.9 47520 -- --
111.92 0.494 7.49 -- -- -- -- -- 0.315 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 57.22 radiation 1.0 4320 < th dose independent rect. 7 2
2 57.24 radiation 1.0 4320 > th dose independent rect. 7 2
3 57.25 radiation 1.0 4320 < th dose dependent rect. 7 2
5 57.38 atmosphere 1015.0 4320 > th dose independent rect. 12 8
7 57.41 atmosphere 1015.0 4320 < th dose independent rect. 12 8
9 57.42 atmosphere 1015.0 4320 > th dose dependent rect. 12 8
40 57.60 atmosphere 1015.0 4320 < th dose independent rect. 13 1
42 57.61 atmosphere 1015.0 4320 > th dose dependent rect. 12 3
44 57.63 atmosphere 1015.0 4320 > th dose dependent rect. 12 1
47 57.64 atmosphere 1015.0 4320 > th dose independent rect. 12 1
63 57.68 atmosphere 1015.0 4320 < th dose independent rect. 17 3
77 57.75 radiation 1.0 4320 < th dose independent rect. 7 5
79 57.77 radiation 1.0 4320 > th dose independent rect. 7 5
102 57.92 temperature 20.0 14400 < th dose independent rect. 20 2
112 57.97 radiation 1.0 4320 < th dose dependent rect. 7 5
121 58.03 temperature 20.0 14400 > th dose independent rect. 20 1
154 58.20 atmosphere 1015.0 4320 > th dose dependent sin 18 NA
179 58.36 radiation 1.0 4320 > th dose independent rect. 6 9
183 58.37 radiation 1.0 4320 < th dose independent rect. 6 9
191 58.41 radiation 30.0 43200 > th dose independent rect. 11 1
198 58.45 humidity 50.0 14400 < th dose dependent rect. 12 1
203 58.46 radiation 30.0 43200 < th dose independent rect. 11 1
216 58.52 temperature 20.0 720 > th dose independent rect. 1 14
218 58.53 temperature 15.0 720 > th dose dependent rect. 2 13
253 58.65 radiation 1.0 4320 < th dose dependent rect. 6 9
270 58.72 wind 9.0 43200 > th dose dependent rect. 12 20
274 58.75 radiation 10.0 43200 < th dose dependent rect. 12 2
278 58.76 wind 9.0 43200 > th dose dependent rect. 13 18
284 58.80 radiation 20.0 43200 > th dose dependent rect. 11 1
304 58.85 wind 9.0 43200 > th dose independent rect. 4 14
322 58.88 wind 9.0 43200 > th dose dependent rect. 10 8
325 58.89 wind 9.0 43200 < th dose independent rect. 3 15
338 58.91 wind 9.0 43200 > th dose independent rect. 22 20
347 58.92 wind 9.0 43200 > th dose independent rect. 13 20
357 58.93 wind 9.0 43200 > th dose independent rect. 10 22
359 58.94 wind 9.0 43200 > th dose independent rect. 7 11
368 58.94 temperature 20.0 720 < th dose dependent rect. 22 21
375 58.95 wind 9.0 43200 < th dose independent rect. 13 20
391 58.96 wind 9.0 43200 > th dose dependent sin 17 NA
405 58.97 humidity 90.0 4320 > th dose dependent rect. 7 2
427 58.99 temperature 15.0 720 > th dose dependent rect. 23 16
428 59.00 wind 9.0 43200 > th dose independent sin 23 NA
432 59.00 wind 9.0 43200 < th dose independent rect. 7 11
434 59.00 wind 9.0 43200 > th dose independent rect. 4 19
440 59.00 wind 9.0 43200 < th dose independent rect. 10 23
476 59.02 temperature 20.0 720 < th dose dependent rect. 1 19
480 59.03 humidity 50.0 43200 > th dose independent rect. 17 1
533 59.05 humidity 60.0 43200 < th dose dependent rect. 17 1
534 59.05 temperature 25.0 270 > th dose dependent rect. 7 7
539 59.06 wind 9.0 43200 > th dose independent no NA NA
540 59.06 wind 9.0 43200 < th dose independent sin 0 NA
556 59.06 wind 9.0 43200 > th dose independent rect. 15 23
561 59.06 wind 9.0 43200 > th dose dependent rect. 10 13
564 59.07 humidity 50.0 43200 < th dose independent rect. 17 1
591 59.08 humidity 50.0 43200 < th dose independent rect. 16 5
599 59.08 wind 9.0 43200 > th dose independent rect. 8 15
614 59.08 temperature 20.0 720 < th dose dependent rect. 14 21
635 59.09 wind 9.0 43200 < th dose independent rect. 15 23
640 59.09 temperature 20.0 720 < th dose dependent rect. 8 23
645 59.10 wind 9.0 43200 < th dose independent no NA NA
646 59.10 radiation 10.0 43200 < th dose independent rect. 12 1
666 59.10 precipitation 0.1 43200 > th dose dependent rect. 13 5
688 59.11 temperature 20.0 720 < th dose dependent no NA NA
703 59.12 wind 9.0 43200 > th dose independent rect. 15 16
712 59.12 wind 9.0 43200 > th dose independent rect. 17 23
715 59.12 radiation 40.0 43200 < th dose dependent rect. 10 1
748 59.14 radiation 30.0 4320 < th dose independent rect. 6 2
753 59.14 radiation 30.0 4320 < th dose independent rect. 22 10
761 59.14 wind 9.0 43200 < th dose independent rect. 15 16
768 59.14 temperature 15.0 720 > th dose dependent sin 3 NA
779 59.15 wind 9.0 43200 > th dose independent rect. 9 5
780 59.15 radiation 30.0 4320 < th dose independent rect. 2 6
781 59.15 radiation 30.0 4320 < th dose independent rect. 24 8
806 59.16 radiation 30.0 4320 < th dose independent rect. 18 14
814 59.16 temperature 20.0 720 > th dose independent rect. 19 20
817 59.16 wind 9.0 43200 < th dose independent rect. 17 23
871 59.19 humidity 50.0 43200 > th dose independent rect. 16 5
900 59.21 humidity 90.0 14400 > th dose dependent rect. 21 1
901 59.21 precipitation 0.1 43200 > th dose dependent rect. 20 1
903 59.21 wind 9.0 43200 > th dose dependent rect. 15 15
909 59.22 radiation 10.0 43200 < th dose independent rect. 17 1
930 59.22 humidity 50.0 14400 < th dose dependent rect. 16 21
931 59.23 temperature 20.0 720 > th dose independent sin 3 NA
932 59.23 wind 3.0 1440 > th dose independent rect. 1 2
957 59.24 humidity 90.0 14400 > th dose dependent rect. 9 2
971 59.25 temperature 20.0 720 < th dose dependent sin 11 NA
997 59.26 radiation 30.0 43200 < th dose dependent rect. 10 4