BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0114000 Os11g0114000|J065119C11
(422 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0114000 Protein of unknown function DUF641, plant doma... 796 0.0
Os12g0113900 Conserved hypothetical protein 756 0.0
Os01g0823700 Protein of unknown function DUF641, plant doma... 199 2e-51
Os10g0378400 Protein of unknown function DUF641, plant doma... 112 4e-25
Os01g0203800 Protein of unknown function DUF641, plant doma... 69 4e-12
>Os11g0114000 Protein of unknown function DUF641, plant domain containing protein
Length = 422
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/422 (91%), Positives = 388/422 (91%)
Query: 1 MESRTPRSSVARSTCNVPGLVLGFSKLCKITKICAAPEFADTKTEFGDYCGGYDQRLIIT 60
MESRTPRSSVARSTCNVPGLVLGFSKLCKITKICAAPEFADTKTEFGDYCGGYDQRLIIT
Sbjct: 1 MESRTPRSSVARSTCNVPGLVLGFSKLCKITKICAAPEFADTKTEFGDYCGGYDQRLIIT 60
Query: 61 RLFEEIGALKSAYIKLQKAHIPYNPPKIAFADEIITSELDSVTALQSLCSWNGSVGSLIN 120
RLFEEIGALKSAYIKLQKAHIPYNPPKIAFADEIITSELDSVTALQSLCSWNGSVGSLIN
Sbjct: 61 RLFEEIGALKSAYIKLQKAHIPYNPPKIAFADEIITSELDSVTALQSLCSWNGSVGSLIN 120
Query: 121 DRWSLVQELEAETRKKDSDIMLLRRELDGLKSANSRLNKQISSSKPSVNHHKDYSVVLKK 180
DRWSLVQELEAETRKKDSDIMLLRRELDGLKSANSRLNKQISSSKPSVNHHKDYSVVLKK
Sbjct: 121 DRWSLVQELEAETRKKDSDIMLLRRELDGLKSANSRLNKQISSSKPSVNHHKDYSVVLKK 180
Query: 181 LTTPSAVLELFKVASTSVHDFAELIFSLISSSDHHCTNNADEHSPYKRYSLEAYLSRTML 240
LTTPSAVLELFKVASTSVHDFAELIFSLISSSDHHCTNNADEHSPYKRYSLEAYLSRTML
Sbjct: 181 LTTPSAVLELFKVASTSVHDFAELIFSLISSSDHHCTNNADEHSPYKRYSLEAYLSRTML 240
Query: 241 AVHXXXXXXXXXXXXXXXXIMRCCDPLDALMAHPNSSFARFCRTKYLAAVPSEMEAAMFR 300
AVH IMRCCDPLDALMAHPNSSFARFCRTKYLAAVPSEMEAAMFR
Sbjct: 241 AVHDGAEDDDELDLARFDRIMRCCDPLDALMAHPNSSFARFCRTKYLAAVPSEMEAAMFR 300
Query: 301 NNLDVRAFVSRGGHLRTWFYRAFATMARSAWALQVAVTAHRRCCGRGSVRMLYARRGSRY 360
NNLDVRAFVSRGGHLRTWFYRAFATMARSAWALQVAVTAHRRCCGRGSVRMLYARRGSRY
Sbjct: 301 NNLDVRAFVSRGGHLRTWFYRAFATMARSAWALQVAVTAHRRCCGRGSVRMLYARRGSRY 360
Query: 361 AAEYMDSXXXXXXXXXXXXXXXXXXFTVTPGMKVGETMVACRVFLCHEQQDTISDETDPK 420
AAEYMDS FTVTPGMKVGETMVACRVFLCHEQQDTISDETDPK
Sbjct: 361 AAEYMDSVVAAAAADAGRGGGDGVAFTVTPGMKVGETMVACRVFLCHEQQDTISDETDPK 420
Query: 421 FR 422
FR
Sbjct: 421 FR 422
>Os12g0113900 Conserved hypothetical protein
Length = 423
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/423 (87%), Positives = 376/423 (88%), Gaps = 1/423 (0%)
Query: 1 MESRTPRSSVARSTCNVPGLVLGFSKLCKITKICAAPEFADTKTEFGDYCGGYDQRLIIT 60
MESRTPRSSVARSTCNVPGLVLGFSKLCKITKICAAPEFADTKTEFGDYCGGYDQRL+IT
Sbjct: 1 MESRTPRSSVARSTCNVPGLVLGFSKLCKITKICAAPEFADTKTEFGDYCGGYDQRLVIT 60
Query: 61 RLFEEIGALKSAYIKLQKAHIPYNPPKIAFADEIITSELDSVTALQSLCSWNGSVGSLIN 120
RLFEEIGALKS YIKLQKAHIPYN PKIAFADEIIT ELDSVTALQSLCSWNGSVGSLIN
Sbjct: 61 RLFEEIGALKSTYIKLQKAHIPYNRPKIAFADEIITYELDSVTALQSLCSWNGSVGSLIN 120
Query: 121 DRWSLVQELEAETRKKDSDIMLLRRELDGLKSANSRLNKQISSSKPSVNHHKDYSVVLKK 180
DRWSLVQELEAETRKKDSDIMLLRRELDGLKSANSRLNKQISSSKPSVNHHKDYS+VLKK
Sbjct: 121 DRWSLVQELEAETRKKDSDIMLLRRELDGLKSANSRLNKQISSSKPSVNHHKDYSIVLKK 180
Query: 181 LTTPSAVLELFKVASTSVHDFAELIFSLISSSDHHCTNNADEHSPYKRYSLEAYLSRTML 240
LTTPSAVLELFKVASTSVHDFAELIFSLISS DH C NNADEHSPYKRYSLEAYLSRTML
Sbjct: 181 LTTPSAVLELFKVASTSVHDFAELIFSLISSPDHRCPNNADEHSPYKRYSLEAYLSRTML 240
Query: 241 AVHXXXXXXXXXXXXXXXXIMRCCDPLDALMAHPNSSFARFCRTKYLAAVPSEMEAAMFR 300
AVH IMRCCDPLDALM HPNSSFARFCRTKYLAAV SEMEAAMFR
Sbjct: 241 AVHDGAEDDDELDLARFDRIMRCCDPLDALMEHPNSSFARFCRTKYLAAVSSEMEAAMFR 300
Query: 301 NNLDVRAFVSRGGHLRTWFYRAFATMARSAWALQVAVTAHRRCCGRGSVRMLYARRGSRY 360
NNLDVRAFVSRGGH RTWFYRAFATMARSAWAL+VAVTA RRCCGRGSVRMLYARRGSRY
Sbjct: 301 NNLDVRAFVSRGGHPRTWFYRAFATMARSAWALRVAVTARRRCCGRGSVRMLYARRGSRY 360
Query: 361 AAEYMDSXXXXXXXXXXXXXXX-XXXFTVTPGMKVGETMVACRVFLCHEQQDTISDETDP 419
AAEYMDS FTVTPGMKVGETMVACRV LCH+Q DTISDETDP
Sbjct: 361 AAEYMDSVVAAAAAADAGRGEGDGVAFTVTPGMKVGETMVACRVLLCHDQHDTISDETDP 420
Query: 420 KFR 422
KFR
Sbjct: 421 KFR 423
>Os01g0823700 Protein of unknown function DUF641, plant domain containing protein
Length = 437
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 208/454 (45%), Gaps = 74/454 (16%)
Query: 1 MESRTPRSSVARSTCNVPGLVLGFSKLCKITKICAAPEFADTKTEFGDYCGGYDQ----- 55
MES T + S+C L+L S +CK+ + AP + G G +
Sbjct: 1 MESATEKVRRTPSSC----LLLRISDICKVRSVGVAPTVREKPKADGSATGESSEDGGAH 56
Query: 56 -----------------------RLIITRLFEEIGALKSAYIKLQKAHIPYNPPKIAFAD 92
+ RL + I LK +Y+ LQ+A +PY+P +I AD
Sbjct: 57 LKVHPHHVSDHESVSECSSARCEEAFVERLLDAISGLKLSYVNLQQALVPYDPEEITIAD 116
Query: 93 EIITSELDSVTALQSLC----SWNGS-----VGSLINDRWSLVQELEAETRKKDSDIMLL 143
E TSEL L+ L W VGS I ++ L EL+A K+DS+I+ L
Sbjct: 117 ERFTSELQETAGLKDLYVNMNKWRNPMYQCYVGSRIQEQQKLAVELQAGMCKRDSEIVCL 176
Query: 144 RRELDGLKSANSRLNKQISSSKPSVNHHKDYSVVLKKLTTPSAVLELFKVASTSVHDFAE 203
R ELD L+ N L ++I S K+ S + + +ELF++++ S+HDFA+
Sbjct: 177 RAELDELERKNMELEEKIGQSA----LQKEGSFAIGMGVSTDMFMELFELSTKSIHDFAK 232
Query: 204 LIF-----------SLISSSDHHCTNNADEHSPYKRYSLEAYLSRTMLAVHXXXXXXXXX 252
L+ +L S D+ + H K Y++EAY + ML H
Sbjct: 233 LVVRWMKLSRWNLGNLTSPIDNSVVYDKRSH---KNYAVEAYFACMMLMGHKEEYLSLDV 289
Query: 253 XXXXXXXIMRCCDPLDALMAHPNSSFARFCRTKYLAAVPSEMEAAMFRNNLDVRAFVSRG 312
+M DP DALM P+S F RFCR KYLA +P ME + F NLD R+FV G
Sbjct: 290 FDY----VMSFSDPFDALMKAPDSCFGRFCREKYLAILPPSMEDSFF-GNLDHRSFVENG 344
Query: 313 GHLRTWFYRAFATMARSAWA-LQVAVTAHRRCCGRGSVRMLYARRGSRYAAEYMDSXXXX 371
GH RT FY+AF TM+R WA L VA + + R M Y + G+ + +++M+
Sbjct: 345 GHPRTPFYQAFVTMSRYVWASLTVARSLNPR------AEMFYVKGGTEFRSKHMEC---V 395
Query: 372 XXXXXXXXXXXXXXFTVTPGMKVGETMVACRVFL 405
FTV PG K+G T++ CRV+L
Sbjct: 396 PSKITKEGDKVSVGFTVMPGFKIGCTVIRCRVYL 429
>Os10g0378400 Protein of unknown function DUF641, plant domain containing protein
Length = 338
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 144/306 (47%), Gaps = 36/306 (11%)
Query: 125 LVQELEAETRKKDSDIMLLRRELDGLKSANSRLNKQISS-------SKPSVNHHKDYSVV 177
+V++ +++ + +D++I L++++D K S+L K++ S+ S + +S+
Sbjct: 39 MVKKFQSQIQTRDTEITHLQQQIDEAKLRKSKLEKKLKQRGLLNKESEESDDEDNYFSIE 98
Query: 178 LKKLTTPSAVLELFKVASTSVHDFAELIFSLISSS--DHHCTNNADEHS------PYKRY 229
L TPS A S+HDF++ + +++ ++ D NA E + +K+Y
Sbjct: 99 L----TPSLFTSAVDNAYQSIHDFSKPLINMMKAAGWDLDAAANAIEPAVVYTRRAHKKY 154
Query: 230 SLEAYLSRTML--------AVHXXXXXXXXXXXXXXXXIMRCCDPLDALMAHPNSSFARF 281
+ E+Y+ + M +V +R DPLD L +P+S F +F
Sbjct: 155 AFESYICQRMFGGFQEESFSVKAANITVSNEAFFHQFLAVRAMDPLDVLSQNPDSVFGKF 214
Query: 282 CRTKYLAAVPSEMEAAMFRNNLDVRAFVSRGGHLRTWFYRAFATMARSAWALQVAVTAHR 341
CR+KYL V +ME + F N+D R +V GGH RT FY+AF +A+S W L HR
Sbjct: 215 CRSKYLLLVHPKMEGSFF-GNMDQRNYVMSGGHPRTPFYQAFLKLAKSIWLL------HR 267
Query: 342 RCCG-RGSVRMLYARRGSRYAAEYMDSXXXXXXXXXXXXXXXXXXFTVTPGMKVGETMVA 400
V++ ++GS ++ +M+S V PG +G +++
Sbjct: 268 LAYSFDPKVKVFQVKKGSDFSEIHMES-VVKNIILDEGAERPKVGLMVMPGFLIGTSVIQ 326
Query: 401 CRVFLC 406
RV+L
Sbjct: 327 SRVYLS 332
>Os01g0203800 Protein of unknown function DUF641, plant domain containing protein
Length = 520
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 146/392 (37%), Gaps = 48/392 (12%)
Query: 58 IITRLFEEIGALKSAYIKLQKAHIPYNPPKIAFADEIITSELDSVTALQ----------- 106
++ LF + A+K+AY +LQ A PY+ I AD + +EL ++ +
Sbjct: 128 LLANLFAGVSAVKAAYAQLQLAQFPYDAEAIQAADAALVAELTRLSDTKRRYLRDPAAAA 187
Query: 107 ---------SLCSWNGSVGSLINDRWSLVQELEAETRKKDSDIMLLRRELDGLKSANSRL 157
+L + L+ ++LE E R K+++ R L A +
Sbjct: 188 KNAAAAGHTALYAHAEEQRHLLKTYQITARKLEGELRAKEAEADRARSSLTAELRAERAM 247
Query: 158 NKQISSSKPSVNHHKDYSVVLKKLTTPSAVLELFKVASTSVHDFAELIFSLISSSDHHCT 217
++ + + + + L P+ L + S+ F++ + + + S+
Sbjct: 248 EARLHPGRTLASLDELHLSGL----NPTHFLTALRHTVKSIRSFSKSMLNSMQSAGWDLA 303
Query: 218 NNADEHSPY--------KRYSLEAYLSRTMLA-VHXXXXXXXXXXXXXXXXIMRCCDPLD 268
A P ++ E+Y++ M A H R +
Sbjct: 304 AAAAAVHPGVQLRRAGDTKFVFESYVAMKMFANFHRRDFNLSFLDEREFYDRRRFFEEFT 363
Query: 269 ALMAHPNSSF-----------ARFCRTKYLAAVPSEMEAAMFRNNLDVRAFVSRG-GHLR 316
L A P S+F +F R KYL+ V + ME A F L+ R VS G G
Sbjct: 364 ELKAAPASAFLDARNARWGGFGKFLRAKYLSLVHARMETAFF-GRLEQRGIVSAGPGFPE 422
Query: 317 TWFYRAFATMARSAWALQVAVTAHRRCCGRGSVRMLYARRGSRYAAEYMDSXX--XXXXX 374
+ ++ FA MAR W L A + R G+R++ YM+S
Sbjct: 423 SSWFADFAEMARRVWLLHCLFYAFDGGAEEDGASIFQVRTGARFSEVYMESVSDGRSDEA 482
Query: 375 XXXXXXXXXXXFTVTPGMKVGETMVACRVFLC 406
FTV PG +VG TM+ CRV+L
Sbjct: 483 AAAAAEERVVGFTVVPGFRVGRTMIQCRVYLS 514
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.132 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,497,466
Number of extensions: 437026
Number of successful extensions: 1149
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1139
Number of HSP's successfully gapped: 5
Length of query: 422
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 318
Effective length of database: 11,605,545
Effective search space: 3690563310
Effective search space used: 3690563310
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)