BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0338000 Os10g0338000|Os10g0338000
(394 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0338000 Protein of unknown function DUF1677, Oryza sat... 768 0.0
Os04g0211900 Protein of unknown function DUF1677, Oryza sat... 424 e-119
Os01g0148500 Protein of unknown function DUF1677, Oryza sat... 295 4e-80
Os12g0139800 158 5e-39
Os11g0143700 157 1e-38
Os02g0198000 Protein of unknown function DUF1677, Oryza sat... 152 5e-37
Os01g0148700 Protein of unknown function DUF1677, Oryza sat... 148 8e-36
Os04g0220500 Protein of unknown function DUF1677, Oryza sat... 108 5e-24
Os12g0467200 Protein of unknown function DUF1677, Oryza sat... 106 4e-23
Os12g0466900 97 2e-20
Os02g0198100 68 1e-11
>Os10g0338000 Protein of unknown function DUF1677, Oryza sativa family protein
Length = 394
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/394 (97%), Positives = 385/394 (97%)
Query: 1 MEEKDGDSIPRQIARTSSTESVSAVYLVSVFKVNPPAVVXXXXXXXXXTPVPLPQHLARL 60
MEEKDGDSIPRQIARTSSTESVSAVYLVSVFKVNPPAVV TPVPLPQHLARL
Sbjct: 1 MEEKDGDSIPRQIARTSSTESVSAVYLVSVFKVNPPAVVGGGGDDDGDTPVPLPQHLARL 60
Query: 61 PSKHCMSFVPVRSRRHAPWIVGVGGNTGIRDYGPETIVFDTNACKVVSGPKLLSTKLCPI 120
PSKHCMSFVPVRSRRHAPWIVGVGGNTGIRDYGPETIVFDTNACKVVSGPKLLSTKLCPI
Sbjct: 61 PSKHCMSFVPVRSRRHAPWIVGVGGNTGIRDYGPETIVFDTNACKVVSGPKLLSTKLCPI 120
Query: 121 LVPMGERIYALAGMPCVTGDINFVPWFEVLDLSMARVIDNASGCCLLDCEWKPLPRPPFF 180
LVPMGERIYALAGMPCVTGDINFVPWFEVLDLSMARVIDNASGCCLLDCEWKPLPRPPFF
Sbjct: 121 LVPMGERIYALAGMPCVTGDINFVPWFEVLDLSMARVIDNASGCCLLDCEWKPLPRPPFF 180
Query: 181 PWDLTPTDYIFPPVDTVKSHVAVGSYILLSITGHGQKGTHMFDTETQQWAKLDDKDLPFI 240
PWDLTPTDYIFPPVDTVKSHVAVGSYILLSITGHGQKGTHMFDTETQQWAKLDDKDLPFI
Sbjct: 181 PWDLTPTDYIFPPVDTVKSHVAVGSYILLSITGHGQKGTHMFDTETQQWAKLDDKDLPFI 240
Query: 241 GRAIPLQGTLLFLGSSNTSDEITAYKIDVSVSSVASPSTITAGHMYSLSIVEIQMLTYLE 300
GRAIPLQGTLLFLGSSNTSDEITAYKIDVSVSSVASPSTITAGHMYSLSIVEIQMLTYLE
Sbjct: 241 GRAIPLQGTLLFLGSSNTSDEITAYKIDVSVSSVASPSTITAGHMYSLSIVEIQMLTYLE 300
Query: 301 DEEEIVTGCKLISFDYPAGNPGLCSLNWVNNDPHISFDFPQHVGELVTIRAYSNVDYLES 360
DEEEIVTGCKLISFDYPAGNPGLCSLNWVNNDPHISFDFPQHVGELVTIRAYSNVDYLES
Sbjct: 301 DEEEIVTGCKLISFDYPAGNPGLCSLNWVNNDPHISFDFPQHVGELVTIRAYSNVDYLES 360
Query: 361 TRALVISNQWKQVYSIYDPLRRLSSPCLAGVISL 394
TRALVISNQWKQVYSIYDPLRRLSSPCLAGVISL
Sbjct: 361 TRALVISNQWKQVYSIYDPLRRLSSPCLAGVISL 394
>Os04g0211900 Protein of unknown function DUF1677, Oryza sativa family protein
Length = 428
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 255/418 (61%), Positives = 292/418 (69%), Gaps = 44/418 (10%)
Query: 14 ARTSSTESVSAVYLV----------SVFKVNPPAVVXXXXXXXXXTPVPLPQHLARLPSK 63
AR TES S+VYLV S+FKVNP + TP+PL +LA L K
Sbjct: 18 ARIRDTESPSSVYLVVGHGVTRPSYSLFKVNPH--LPANADDGGDTPLPLLPYLAHLTGK 75
Query: 64 HCMSFVPVRSRRHAPWIVGVGGNTGIRDYGP-ETIVFDTNACKVVSGPKLLSTKLCPILV 122
H MSFV VRSRRHAPWIVGVGG++ R+YGP ETIVFDT K +SGPKLLSTKLCPIL+
Sbjct: 76 HYMSFVSVRSRRHAPWIVGVGGSSA-RNYGPDETIVFDTVMRKEISGPKLLSTKLCPILL 134
Query: 123 PMGERIYALAGMPCVTGDINFVPWFEVLDLSMARVIDNASGCCLLDCEWKPLPRPPFFPW 182
P G++IYALA P VTGD+NFVPWFEVLDLS+ARV D+AS L+ CEW+PLPRPPFFPW
Sbjct: 135 PFGDKIYALARRPAVTGDVNFVPWFEVLDLSVARVDDDASD-RLVGCEWRPLPRPPFFPW 193
Query: 183 DLTPTDYIFPPVDTVKSHVAVGSYILLSITGHGQKGTHMFDTETQQWAKLDDKDLPFIGR 242
DLTPTDYIFPPV TVKSHVAV SYILLSIT GQ GTHMFD ET++W KLDD DLPF GR
Sbjct: 194 DLTPTDYIFPPVVTVKSHVAVASYILLSIT--GQTGTHMFDVETEEWRKLDDNDLPFHGR 251
Query: 243 AIPLQGT-LLFLGSSNTSDEITAYKIDV--------------------SVSSVASPSTIT 281
A+PLQGT L+LG SNT++ ITAY+I V S+VASPS
Sbjct: 252 AVPLQGTGTLYLGLSNTTNAITAYRIKVVSAVQPPPLQAQASHLQGACPASAVASPSITP 311
Query: 282 AGHMYSLSIVEIQMLTYLEDEEEIVTGCKLISFDYPAGNPGLCSLNWVNNDPHISFDFPQ 341
G + SLSIVEI+M+T EDEEEIV+ + I D+ PG CS W N+DP P+
Sbjct: 312 TGCL-SLSIVEIRMVTNFEDEEEIVSTGRFIFLDHLPDRPGFCSFTWSNDDPLQFSSLPE 370
Query: 342 HVGELVTIRAYS-----NVDYLESTRALVISNQWKQVYSIYDPLRRLSSPCLAGVISL 394
H EL+TIRAY+ + DYLESTR LVISNQWKQVYSI D +R LS PCLAG ISL
Sbjct: 371 HTKELLTIRAYTTEGPLSQDYLESTRTLVISNQWKQVYSICDTVRGLSFPCLAGAISL 428
>Os01g0148500 Protein of unknown function DUF1677, Oryza sativa family protein
Length = 399
Score = 295 bits (755), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 178/374 (47%), Positives = 231/374 (61%), Gaps = 34/374 (9%)
Query: 29 SVFKVNPPAVVXXXXXXXXX---TPVPLPQHLARLPSKHCMSFVPVRSRRHAPWIVGVGG 85
SVFKV+P A PVP+P+ LAR+ +K CMSF PV R WIVGVGG
Sbjct: 52 SVFKVDPYAAAKRGGGGGDEEDPAPVPIPRRLARISAKFCMSFAPVPVRS---WIVGVGG 108
Query: 86 NTGIRDYGPETIVFDTNACKVVSGPKLLSTKLCPILVPMGERIYALAGMPCVTGDINFVP 145
++ DY PETIVFDT V+ GP LLSTKL P+++ +G +IYALA P VTG ++FVP
Sbjct: 109 DSADEDYAPETIVFDTETRAVIRGPNLLSTKLHPVVLTIGHKIYALARYPSVTGQLDFVP 168
Query: 146 WFEVLDLSMARVIDNASGCCLLDCEWKPLPRPPFFPWDLTPTDYIFPPVDTVKSHVAVGS 205
WFEVLDLS ARV+D L CEWKPLPRPPFFPWDLTP Y+ PP+ TV+S+VA+ S
Sbjct: 169 WFEVLDLSQARVVDGH----LESCEWKPLPRPPFFPWDLTPLQYLSPPMVTVESYVALAS 224
Query: 206 YILLSITGHGQKGTHMFDTETQQWAKLDDKDLPFIGRAIPLQGTLLFLGSSNTSDEITAY 265
IL+S++ Q+GTHMFD + +QW+KLDD LPF+ A+P G +FLG S ITAY
Sbjct: 225 CILVSLS--QQEGTHMFDVDKEQWSKLDDNSLPFVRGAVP-HGP-IFLGLSRAKKIITAY 280
Query: 266 KIDVSVSSVASPSTITAGHMYSLSIVEIQMLTYLEDEEEIVTGCKLISFDYPAGNPGLCS 325
I V V P + G SLSIVE +++ + EEEI++ +S G+PG CS
Sbjct: 281 NITV----VCQPR--SGGTAPSLSIVEFPVVSDM--EEEILSTPIFLSL----GSPGFCS 328
Query: 326 L-NWVNNDPHISFDFPQHVGELVTIRAYS----NVDYLESTRALVISNQWKQVYSIYDPL 380
L +W + H + D P + + ++ + +Y+ES+ L+I NQWKQVY I D
Sbjct: 329 LKSWSD---HPTTDDPCTRARIKLMAYHTEEPISQEYIESSHGLLIPNQWKQVYEICDSS 385
Query: 381 RRLSSPCLAGVISL 394
R L CL +SL
Sbjct: 386 RELIWQCLITAMSL 399
>Os12g0139800
Length = 396
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 133/221 (60%), Gaps = 14/221 (6%)
Query: 55 QHLARLPSKHC-MSFVPVRSRRHAPWIVGVGGNTGIRDYGPETIVFDTNACKVVSGPKLL 113
+ + RLP+ SF VRS H WIVGVGG+ G +T++FDT KVV GP L
Sbjct: 68 RRITRLPTAAGGKSFTSVRSI-HRAWIVGVGGDPG------DTVIFDTRTEKVVHGPALN 120
Query: 114 STKLCPILVPMGERIYALAGMPCVTGDINFVPWFEVLDLSMARVIDNAS--GCCLLDCEW 171
S K CP L+ +G+++YA++ P D +F PWFE+LDLS ++V+ + G L C W
Sbjct: 121 SAKWCPALMSVGDKVYAMSKSPSWIADPDFPPWFELLDLSQSKVVAATAGRGYHLEGCSW 180
Query: 172 KPLPRPPFFPWDLTPTDYIFPPVDTVKSHVAVGSYILLSITGHGQKGTHMFDTETQQWAK 231
LP PP FPW L P DY PV V S+V V +YIL+S + GT+ FDT + +W K
Sbjct: 181 IKLPHPPCFPWKLRPVDYTLLPVVIVMSYVVVDAYILVSF--NQPWGTYAFDTNSIKWHK 238
Query: 232 LDDKDLPFIGRAIPLQGTLLFLGSSNTSDEITAYKIDVSVS 272
+DDK LPF G A P G+ +FLG S + I AY+I+V+ S
Sbjct: 239 VDDKRLPFTGCAAP-HGS-VFLGLSKDNGPINAYRINVTTS 277
>Os11g0143700
Length = 435
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 144/251 (57%), Gaps = 23/251 (9%)
Query: 55 QHLARLPSKHC-MSFVPVRSRRHAPWIVGVGGNTGIRDYGPETIVFDTNACKVVSGPKLL 113
+ + RLP+ SF VRS H WIVGVGG+ G +TI+FDT KV+ GP L
Sbjct: 131 RRITRLPTAAGGKSFTSVRSI-HRAWIVGVGGDPG------DTIIFDTRTEKVIHGPALN 183
Query: 114 STKLCPILVPMGERIYALAGMPCVTGDINFVPWFEVLDLSMARVIDNASGCC--LLDCEW 171
S K CP L+ +G+++YA++ P D +F PWFE+LDLS ++V+ +G L C W
Sbjct: 184 SAKWCPALMAVGDKVYAMSKSPSWIADPDFPPWFELLDLSQSKVVAATAGRGYHLEGCSW 243
Query: 172 KPLPRPPFFPWDLTPTDYIFPPVDTVKSHVAVGSYILLSITGHGQKGTHMFDTETQQWAK 231
LP PP FPW L P DY PV V S+V V +YIL+S + GT+ FDT + +W K
Sbjct: 244 IKLPHPPCFPWKLRPVDYTLLPVVIVMSYVVVDAYILVSF--NQPWGTYAFDTNSIKWHK 301
Query: 232 LDDKDLPFIGRAIPLQGTLLFLGSSNTSDEITAYKIDVSVSSVASPSTITAGHMYSLSIV 291
+D+K LPF G A P G+ +FLG S + I AY+I+V+ S H LSIV
Sbjct: 302 VDNKKLPFTGCAAP-HGS-VFLGLSKDNGPINAYRINVTTSD--------KNHDPCLSIV 351
Query: 292 EIQMLTYLEDE 302
+ + Y+E E
Sbjct: 352 -VLPVKYMEHE 361
>Os02g0198000 Protein of unknown function DUF1677, Oryza sativa family protein
Length = 380
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 55 QHLARLPSK-HCMSFVPVRSRRHAPWIVGVGGNTGIRDYGPETIVFDTNACKVVSGPKLL 113
A LP+ C + V VRSR WIV VGGN G T++FDT +V++GPKLL
Sbjct: 80 HRFAHLPTDVACKTVVSVRSR----WIVSVGGNPG------GTVLFDTETRRVITGPKLL 129
Query: 114 STKLCPILVPMGERIYALAGMPCVTGDINFVPWFEVLDLSMARVIDNASGCCLLD-CEWK 172
S KL P+ +G+RIY L+ P F PWFEVLDLS A V+ A G LD C W+
Sbjct: 130 SAKLSPVAAAVGDRIYVLSSRPQY-----FEPWFEVLDLSRATVVATADGRHTLDGCSWE 184
Query: 173 PLPRPPFFPWDLTPTDYIFPPVDTVKSHVAVGSYILLSITGHGQKGTHMFDTETQQWAKL 232
LP P FP L+P Y+ PP+ V S+V Y+L+S+ G+ T+ FDT T +W KL
Sbjct: 185 ALPDPICFPCVLSPAGYLAPPLILVTSYVLFLPYLLVSVNNMGKMTTYAFDTGTHRWHKL 244
Query: 233 DDKDLPFIGRAIPLQGTLLFLGSSNTSDEITAYKI 267
D LPF G A PL G L + + +T + +
Sbjct: 245 YDYGLPFFGSATPLVGIRLVSSAPHLKLSVTEFPV 279
>Os01g0148700 Protein of unknown function DUF1677, Oryza sativa family protein
Length = 385
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 151/324 (46%), Gaps = 31/324 (9%)
Query: 66 MSFVPVRSRRHAPWIVGVGGNTGIRDYGPETIVFDTNACKVVSGPKLLSTKLCPILVPMG 125
MSF V SR + P IVGVGG T V+D + GP L+ KL P+L+P G
Sbjct: 80 MSFATVESR-YGPRIVGVGGKL-------FTTVYDPKTSMEIPGPFLVEPKLRPVLIPRG 131
Query: 126 ERIYALAGMPCVTGDINFVPWFEVLDLSMARVIDNASGCCLLDCEWKPLPRPPFFPWDLT 185
++YAL+ P V ++F+PWF LDL+ V + + W LP PP FP L
Sbjct: 132 SKLYALSRTPSVVPGLDFLPWFVYLDLNYVLVAPHDART----MGWHHLPPPPIFPVRLN 187
Query: 186 PTDYIFPPVDTVKSHVAVGSYILLSITGHGQKGTHMFDTETQQWAKLDDKDLPFIGRAIP 245
P +Y PP V S+ VGS+ILLS+ KGT FD +T QW +D +LPFIG+A+P
Sbjct: 188 PLEYRDPPEVRVASYAVVGSHILLSV--QQDKGTCAFDMDTNQWDMVDANNLPFIGKAVP 245
Query: 246 LQGTLLFLGSSNTSDEITAYKIDVSVSSVASPSTITAGHMYSLSIVEIQMLTYLEDEEEI 305
L G L S Y I V T + H LSI+ I +++ + I
Sbjct: 246 LGGHLFIARSIANGGAAAVYDIRV----FPLQPTSSGSHKTELSILNIPVVS-----KGI 296
Query: 306 VTGCKLISFDYPAGNPGLCSLNWVNNDPHISFDFPQHVGELVTIRAYSNV--DYLESTRA 363
V G S G+ S V + D H +V R YS V D E
Sbjct: 297 VPGQLFCSL-----GKGIFSSIDVRSAATPGPDAKLHKARIVH-RTYSQVGGDDTEDNNY 350
Query: 364 LVISNQWKQVYSIYDPLRRLSSPC 387
VI+ Q +Q+Y + D R L+ P
Sbjct: 351 TVITKQHRQIYKLIDRTRHLAHPS 374
>Os04g0220500 Protein of unknown function DUF1677, Oryza sativa family protein
Length = 1510
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 114/237 (48%), Gaps = 31/237 (13%)
Query: 62 SKHCMSFVPVRSRRHAPWIVGVGGNTGIRDYGPETIVFDTNACKVVSGPKLLSTKLCPIL 121
S MSF V +R IVG+G + +T V+D V +G +L+ K+ P+L
Sbjct: 469 SGRGMSFAAVGTR-----IVGIGLD--------QTTVYDPKTSTVRAGCRLVFPKVNPVL 515
Query: 122 VPMGERIYALAGMPCVTGDINFVPWFEVLDLSMARVIDNASGCCLLDCEWKPLPRPPFFP 181
V G ++YA++ P V +F PWF VLD L W+ LP PP FP
Sbjct: 516 VSHGGKLYAVSCCPSVVNGRDFEPWFLVLD-------------SLGYFGWRELPPPPIFP 562
Query: 182 WDLTPTDYIFPPVDTVKSHVAVGSYILLSITGHGQ---KGTHMFDTETQQWAKLDDKDLP 238
L P +Y PP V ++ VGS+ILLS++ Q KGT FD + +QW + D +LP
Sbjct: 563 CRLNPLEYRDPPAVRVAAYAIVGSHILLSVSVQQQGQDKGTCAFDMDAEQWEMVLDTNLP 622
Query: 239 FIGRAIPLQGTLLFLGSSNTSDEITAYKIDVSVSSVASPSTITAGHMYSLSIVEIQM 295
F G+A+PL S + Y ++V V + T LSIVE+Q+
Sbjct: 623 FTGQAVPLGDHRFVSCSMAKGGAASVYYMEVMVFPPGIAGSGTGKK--ELSIVELQV 677
>Os12g0467200 Protein of unknown function DUF1677, Oryza sativa family protein
Length = 408
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 150/334 (44%), Gaps = 62/334 (18%)
Query: 66 MSFVPVRSRRHAPWIVGVGGNTGIRDYGPETIVFDTNACKVVSGPKLLSTKLCPILVPMG 125
MSF V +R VGVG T V+D GP+L+ K+ P+L+ +
Sbjct: 93 MSFAAVGTR-----TVGVGVEL--------TTVYDPETSTERGGPRLIFPKVNPVLISIS 139
Query: 126 E---------RIYALAGMPCVTGDINFVPWFEVLDLSMARVIDNASGCCLLDCEWKPLPR 176
+ +YAL+ P V ++F PWF VLD L W+ LP
Sbjct: 140 DDGGGVVGGGTLYALSRTPAVVRPLDFEPWFFVLD-------------DLSHTVWRELPS 186
Query: 177 PPFFPWDLTPTDYIFPPVDTVKSHVAVGSYILLSIT--------GHGQKGTHMFDTETQQ 228
PP FP L P +++ PP V ++ VGS+ILLS++ KGT FD +T+Q
Sbjct: 187 PPLFPCRLNPLEFLDPPKLRVAAYALVGSHILLSVSVQQLQPQQQQEDKGTCAFDMDTEQ 246
Query: 229 WAKLDDKDLPFIGRAIPL--QGTLLFLGSSNTSDEITAYKIDVSVSSVASPSTITAGHMY 286
W + D +LPF G+A+PL F+ ++ + ++T Y++ V +S+V +T
Sbjct: 247 WEMVHDSNLPFDGQALPLGSDDDHRFVAVASAAADVTVYRMVVGISAVTGKKELT----- 301
Query: 287 SLSIVEIQMLTYLEDEEEIVTGCKLISFDYPAGNPGLCSLNWVNNDPHISFDFPQHVGEL 346
IV ++++ + IV G L + G S + + I+ VG
Sbjct: 302 ---IVALRVVVASNSKCRIVPGNLLCAM----GKGSFASFEFRS----IAAASMGKVGRA 350
Query: 347 VTI-RAYSNVDYLESTRALVISNQWKQVYSIYDP 379
+ R YS VD E +++ Q +QVY + DP
Sbjct: 351 RIVHRTYSLVDDGEDDWVVMVKKQDRQVYKLRDP 384
>Os12g0466900
Length = 237
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 96/197 (48%), Gaps = 42/197 (21%)
Query: 66 MSFVPVRSRRHAPWIVGVGGNTGIRDYGPETIVFDTNACKVVSGPKLLSTKLCPILVPMG 125
MSF V +R IVGVG T V+D A GP+L+ KL P+L+ +
Sbjct: 1 MSFAAVGTR-----IVGVGVEL--------TTVYDPEASTERGGPRLVFPKLNPVLISIS 47
Query: 126 E---------RIYALAGMPCVTGDINFVPWFEVLDLSMARVIDNASGCCLLDCEWKPLPR 176
+ ++YAL+ P V ++F PWF VLD ++ + W+ LP
Sbjct: 48 DDGGGGGGGGKLYALSRTPAVVRQLDFEPWFFVLD-DLSHTV------------WRQLPS 94
Query: 177 PPFFPWDLTPTDYIFPPVDTVKSHVAVGSYILL-------SITGHGQKGTHMFDTETQQW 229
PP FP L P +++ PP V ++ VGS+ILL KGT FD +T+QW
Sbjct: 95 PPLFPCRLNPLEFLDPPKVRVTAYALVGSHILLSVSVQPPQQQQQDHKGTCAFDMDTEQW 154
Query: 230 AKLDDKDLPFIGRAIPL 246
+ D +LPF G+A+PL
Sbjct: 155 EMVHDTNLPFDGQALPL 171
>Os02g0198100
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 107/256 (41%), Gaps = 58/256 (22%)
Query: 15 RTSSTESVSAVYLVSVFKVNPPAVVXXXXXXXXXTPVPLPQHLARLP----------SKH 64
R S E+ AVYLV+ N P+ V R +KH
Sbjct: 31 RDESAENRKAVYLVAELSTNEPSHSVFMVDAAAAAAVAGGGGEVRRAHPLSGSGLTGAKH 90
Query: 65 CMSFVPVRSRRHAPWIVGVGGNTGIRDYGPETIVFDTNACKVVSGPKLLSTKLCPILVPM 124
MSFV VRS H WI+G G V G P L
Sbjct: 91 GMSFVAVRSE-HGSWILGAG----------------------VPG-------AAPPLAQA 120
Query: 125 GERIYALAGMPCV--TGDINFVPWFEVLDLSMARVIDNASGCCLLDCE----WKPLPRPP 178
G +YA++ P V ++++PW E L +M G LD WK LP PP
Sbjct: 121 GV-VYAISRRPRVRLATRLDYLPWVESLSFNM--------GVPRLDRMDSPYWKSLPPPP 171
Query: 179 FFPWDLTPTDYIFPPVDTVKSHVAVGSYILLSIT---GHGQKGTHMFDTETQQWAKLDDK 235
FP L P++Y PP V S VGS+ILLS+ G Q+GT+ F + W K+ D
Sbjct: 172 LFPCLLRPSEYRNPPDYCVSSFAVVGSHILLSMEQLPGEEQRGTYGFHVVDKAWEKVHDC 231
Query: 236 DLPFIGRAIPLQGTLL 251
+LPF+G+A+ + G+L
Sbjct: 232 NLPFVGQAVSIGGSLF 247
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,676,636
Number of extensions: 651696
Number of successful extensions: 1232
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1199
Number of HSP's successfully gapped: 11
Length of query: 394
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 291
Effective length of database: 11,657,759
Effective search space: 3392407869
Effective search space used: 3392407869
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)