BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0117800 Os10g0117800|AK108670
(440 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0117800 Guanine nucleotide binding protein (G-protein)... 835 0.0
Os11g0206700 Guanine nucleotide binding protein (G-protein)... 462 e-130
Os06g0111400 Guanine nucleotide binding protein (G-protein)... 454 e-128
Os12g0593000 Similar to Extra-large G-protein 312 3e-85
Os05g0333200 Guanine nucleotide-binding protein alpha-1 sub... 171 8e-43
>Os10g0117800 Guanine nucleotide binding protein (G-protein), alpha subunit
family protein
Length = 440
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/440 (92%), Positives = 407/440 (92%)
Query: 1 ATLFSLPIPRGLKEDTTLYSSRFVPEYXXXXXXXXXXXXXXXXXXXXTIFKQAKFLYGTE 60
ATLFSLPIPRGLKEDTTLYSSRFVPEY TIFKQAKFLYGTE
Sbjct: 1 ATLFSLPIPRGLKEDTTLYSSRFVPEYLEQKKVQKLLLVGLEGSGSSTIFKQAKFLYGTE 60
Query: 61 FSPEEILNLKLMIQSNVYKYLSTLLEWRXXXXXXXXXXXXXLGMSNHKGDGEPKAVQSTS 120
FSPEEILNLKLMIQSNVYKYLSTLLEWR LGMSNHKGDGEPKAVQSTS
Sbjct: 61 FSPEEILNLKLMIQSNVYKYLSTLLEWRECFEDEALEEEKELGMSNHKGDGEPKAVQSTS 120
Query: 121 SLYSLNQRLMHFANWLLEIVALGNLDAFFPAATREYAPIVEEVWKDPAIQATYKRKNELH 180
SLYSLNQRLMHFANWLLEIVALGNLDAFFPAATREYAPIVEEVWKDPAIQATYKRKNELH
Sbjct: 121 SLYSLNQRLMHFANWLLEIVALGNLDAFFPAATREYAPIVEEVWKDPAIQATYKRKNELH 180
Query: 181 FLPDVASYFLDRVVEISSNEYEPTETDILYAEGVNQWNGLSTLEFSLDDRGPLSDSYADK 240
FLPDVASYFLDRVVEISSNEYEPTETDILYAEGVNQWNGLSTLEFSLDDRGPLSDSYADK
Sbjct: 181 FLPDVASYFLDRVVEISSNEYEPTETDILYAEGVNQWNGLSTLEFSLDDRGPLSDSYADK 240
Query: 241 AGNPAIQTKYQLIRMNSKGLTGGFKCLGMLEDIRAIIFCISLADYDQTWVQSSGEPCNKM 300
AGNPAIQTKYQLIRMNSKGLTGGFKCLGMLEDIRAIIFCISLADYDQTWVQSSGEPCNKM
Sbjct: 241 AGNPAIQTKYQLIRMNSKGLTGGFKCLGMLEDIRAIIFCISLADYDQTWVQSSGEPCNKM 300
Query: 301 IASRDLFEDVIRHPSFEDTPCVLLLNKYDAFEEKISRVPLTVCEWFADFSPVRPHHTSQT 360
IASRDLFEDVIRHPSFEDTPCVLLLNKYDAFEEKISRVPLTVCEWFADFSPVRPHHTSQT
Sbjct: 301 IASRDLFEDVIRHPSFEDTPCVLLLNKYDAFEEKISRVPLTVCEWFADFSPVRPHHTSQT 360
Query: 361 SLASHAYYYVAVKFKDLYSSVADGRKLFVFQTKALERRTVDDAFRYIREVLRWDDVKNSD 420
SLASHAYYYVAVKFKDLYSSVADGRKLFVFQTKALERRTVDDAFRYIREVLRWDDVKNSD
Sbjct: 361 SLASHAYYYVAVKFKDLYSSVADGRKLFVFQTKALERRTVDDAFRYIREVLRWDDVKNSD 420
Query: 421 AGYCSADESSYSVDMTTSPS 440
AGYCSADESSYSVDMTTSPS
Sbjct: 421 AGYCSADESSYSVDMTTSPS 440
>Os11g0206700 Guanine nucleotide binding protein (G-protein), alpha subunit
family protein
Length = 856
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/451 (53%), Positives = 309/451 (68%), Gaps = 18/451 (3%)
Query: 1 ATLFSLPIPRGLKEDT---TLYSSRFVPEYXXXXXXXXXXXXXXXXXXXXTIFKQAKFLY 57
LFSLP+P G +T YS+R VP+Y TIFKQAK+LY
Sbjct: 407 CALFSLPVPPGNSNETRDEVHYSARTVPDYLDQKRIQKLLLLGPDGAGTSTIFKQAKYLY 466
Query: 58 GTEFSPEEILNLKLMIQSNVYKYLSTLLEWRXX-XXXXXXXXXXXLGMSNHKGDGEPKAV 116
GT F+ EE+ N+KL+IQSN++KYL LLE R + E KA
Sbjct: 467 GTRFTQEELENIKLIIQSNMFKYLGILLEGRERFEEEALSRSNCTISEDEETQQDENKAN 526
Query: 117 QSTSSLYSLNQRLMHFANWLLEIVALGNLDAFFPAATREYAPIVEEVWKDPAIQATYKRK 176
S S +YS+N RL F++WLL+I+A+G+LDAFFPAATREYAP V+E+WKDPAIQATYKRK
Sbjct: 527 GSNSCIYSINPRLKKFSDWLLDIIAMGDLDAFFPAATREYAPFVDEMWKDPAIQATYKRK 586
Query: 177 NELHFLPDVASYFLDRVVEISSNEYEPTETDILYAEGVNQWNGLSTLEFSLDDRGPLSDS 236
+ELHFLPDVA YFL R +E+SSNEYEP+E D+++AEGV Q NGL+ +EF+LDDR P+S+
Sbjct: 587 DELHFLPDVAEYFLSRAIEVSSNEYEPSEKDVIFAEGVTQGNGLAFIEFALDDRSPMSEP 646
Query: 237 YADKAGNPAIQ----TKYQLIRMNSKGLTGGFKCLGMLEDIRAIIFCISLADYDQTW--V 290
Y + NP TKYQLIR+++KG+ G K + M ED+R +IF ++L+DYDQ V
Sbjct: 647 YIE---NPEAHSQPLTKYQLIRVSAKGMNDGCKWVEMFEDVRMVIFSVALSDYDQVGPPV 703
Query: 291 QSSGEP-CNKMIASRDLFEDVIRHPSFEDTPCVLLLNKYDAFEEKISRVPLTVCEWFADF 349
S P NKM+ S++LFE IR P F DTP VL+LNKYD FEEKI+R PLT CEWF DF
Sbjct: 704 YGSSRPLLNKMMQSKELFEATIRQPCFCDTPFVLVLNKYDLFEEKINRAPLTTCEWFNDF 763
Query: 350 SPVRPHHTSQTSLASHAYYYVAVKFKDLYSSVADGRKLFVFQTKALERRTVDDAFRYIRE 409
SPVR HH +Q SLA AYYYVAVKFKDLY GRKLFV+Q +A +R+TVD+AF+Y+RE
Sbjct: 764 SPVRTHHNNQ-SLAQQAYYYVAVKFKDLYYE-HTGRKLFVWQARARDRQTVDEAFKYVRE 821
Query: 410 VLRWDDVKNSDAGYCSADESSYS-VDMTTSP 439
+LRW+D K + Y ++S YS +M++SP
Sbjct: 822 ILRWEDEKEENL-YGGGEDSFYSTTEMSSSP 851
>Os06g0111400 Guanine nucleotide binding protein (G-protein), alpha subunit
family protein
Length = 867
Score = 454 bits (1168), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/448 (54%), Positives = 305/448 (68%), Gaps = 16/448 (3%)
Query: 1 ATLFSLPIPRGLKE---DTTLYSSRFVPEYXXXXXXXXXXXXXXXXXXXXTIFKQAKFLY 57
LFSLP+P + D YS+R VP+Y TIFKQAK LY
Sbjct: 419 CALFSLPVPPANSDEPKDEAPYSARTVPDYLDQKRIQKLLILGSPGAGTSTIFKQAKLLY 478
Query: 58 GTEFSPEEILNLKLMIQSNVYKYLSTLLEWRXXXXXXXXXXXXXLGMS--NHKGDGEPKA 115
T F+ EE+ ++KLMIQSN++KYL LLE R N + DG K+
Sbjct: 479 DTRFTQEELDSIKLMIQSNMFKYLGILLEGRERFEEEALAGSNNPSSEDENTQHDGN-KS 537
Query: 116 VQSTSSLYSLNQRLMHFANWLLEIVALGNLDAFFPAATREYAPIVEEVWKDPAIQATYKR 175
S S +YS+N +L F++WLL+I+A+G+LDAFFPAATREYAPIVEE+WKDPAIQATYKR
Sbjct: 538 NGSDSCIYSINAKLKKFSDWLLDIIAMGDLDAFFPAATREYAPIVEEMWKDPAIQATYKR 597
Query: 176 KNELHFLPDVASYFLDRVVEISSNEYEPTETDILYAEGVNQWNGLSTLEFSLDDRGPLSD 235
K+ELHFLPDVA YFL R +E+SSNEYEP+E DI+YAEGV Q NGL+ +EF+LDDR P+S+
Sbjct: 598 KDELHFLPDVAEYFLSRAIEVSSNEYEPSEKDIIYAEGVTQGNGLAFIEFTLDDRSPMSE 657
Query: 236 SYADKAGNPAIQT--KYQLIRMNSKGLTGGFKCLGMLEDIRAIIFCISLADYDQTWVQSS 293
Y D P QT KYQLIR+++KG+ G K + M ED+ +IF ++L+DYDQ SS
Sbjct: 658 MYTDNH-EPHSQTLNKYQLIRVSAKGMNEGCKWVEMFEDVSMVIFSVALSDYDQLGAPSS 716
Query: 294 G--EP-CNKMIASRDLFEDVIRHPSFEDTPCVLLLNKYDAFEEKISRVPLTVCEWFADFS 350
G P NKMI SRDLFE IR P F D P VL+LNK+D FEEKI RVPL+ CEWF+DF
Sbjct: 717 GGNSPLVNKMIQSRDLFEATIRQPCFRDMPFVLVLNKFDLFEEKIGRVPLSTCEWFSDFC 776
Query: 351 PVRPHHTSQTSLASHAYYYVAVKFKDLYSSVADGRKLFVFQTKALERRTVDDAFRYIREV 410
P+R HH +Q SLA A+YYVA+KFK+LY++ D RKLFV+Q +A +R TVD+AF++IREV
Sbjct: 777 PLRTHHNNQ-SLAHQAFYYVAMKFKELYAACTD-RKLFVWQARARDRLTVDEAFKFIREV 834
Query: 411 LRWDDVKNSDAGYCSADESSYSVDMTTS 438
L+W+D K D G DES YS +S
Sbjct: 835 LKWEDEK--DGGGYYPDESFYSTTELSS 860
>Os12g0593000 Similar to Extra-large G-protein
Length = 686
Score = 312 bits (799), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 176/409 (43%), Positives = 254/409 (62%), Gaps = 33/409 (8%)
Query: 48 TIFKQAKFLYGTE-FSPEEILNLKLMIQSNVYKYLSTLLEWRXXXXXXXXXXXXXLGMSN 106
TI KQAKFLY + FS EE +L+L+IQSN+Y YL LLE R S+
Sbjct: 286 TILKQAKFLYKSRPFSVEECEDLRLIIQSNIYNYLGILLEGRERFEEEAIADRRTTCQSD 345
Query: 107 HKGDG--EPKAVQSTSSLYSLNQRLMHFANWLLEIVALGNLDAFFPAATREYAPIVEEVW 164
G EP+ + Y + RL F++W+L+ +A+GNL+ FPAA+REYAP+VEE+W
Sbjct: 346 PSSSGHCEPELCNDITEYY-IAPRLKAFSDWILKAMAIGNLEDIFPAASREYAPMVEELW 404
Query: 165 KDPAIQATYKRKNELHFLPDVASYFLDRVVEISSNEYEPTETDILYAEGVNQWNGLSTLE 224
KDPAIQATY R++EL FLP ASYFLD+ V+IS EYE ++ DILYA+G+ +GL++ +
Sbjct: 405 KDPAIQATYNRRSELPFLPSAASYFLDKAVDISRTEYELSDMDILYADGITSSDGLASTD 464
Query: 225 FS-----LDDRGPLSDSYADKAGNPAIQTKYQLIRMNSKGLTGGFKCLGMLEDIRAIIFC 279
FS LD RG D+ +YQLIR+N+KGL K L M +D+R +IFC
Sbjct: 465 FSFPQLALDGRG------FDEPDPQDTLLRYQLIRINNKGLHENCKWLQMFDDVRLVIFC 518
Query: 280 ISLADYDQTWVQSSGEPCNKMIASRDLFEDVIRHPSFEDTPCVLLLNKYDAFEEKISRVP 339
++++DYD+ + ++G NKM+ +R LFE + HP FE +LLL K+D E+KI + P
Sbjct: 519 VAVSDYDEYYEDANGNVVNKMMETRQLFESIALHPIFEQMDFLLLLTKFDILEQKIGKSP 578
Query: 340 LTVCEWFADFSPVRPHH------------TSQTSLASHAYYYVAVKFKDLYSSVADGRKL 387
LT C+WF+DF+P+ + ++ ++LA A +Y+AVKFK ++ S + RKL
Sbjct: 579 LTSCDWFSDFTPLVSRNLINGTSKSSRGSSTGSTLAQMAGHYIAVKFKSVFQSFTE-RKL 637
Query: 388 FVFQTKALERRTVDDAFRYIREVLRWDDVK----NSDAGYCSADESSYS 432
+V AL++ +V A RY RE+++W+D K +S+ Y S + SSYS
Sbjct: 638 YVSYVNALDQESVRSAIRYGREIIKWEDEKPVFGSSETTY-SEEPSSYS 685
>Os05g0333200 Guanine nucleotide-binding protein alpha-1 subunit (GP-alpha-1)
Length = 390
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 190/369 (51%), Gaps = 52/369 (14%)
Query: 48 TIFKQAKFLYGTEFSPEEILNLKLMIQSNVYKYLSTLLEWRXXXXXXXXXXXXXLGMSNH 107
TIFKQ K L+ T F E+ + +I +NVY+ + L E
Sbjct: 64 TIFKQIKLLFQTGFDEAELRSYTSVIHANVYQTIKILYE--------------------- 102
Query: 108 KGDGEPKAVQSTSSLYSLNQRLMHFANWLLEIVALGNLDAFFPAATREYAPIVEEVWKDP 167
G E V+S SS Y ++ L +I G LD +P +E V+ +W+DP
Sbjct: 103 -GAKELSQVESDSSKYVISPDNQEIGEKLSDID--GRLD--YPLLNKELVLDVKRLWQDP 157
Query: 168 AIQATYKRKNELHFLPDVASYFLDRVVEISSNEYEPTETDILYAEGVNQWNGLSTLEFSL 227
AIQ TY R + L LPD A YF++ + ++ Y PT+ D+LYA + NG+ ++FS
Sbjct: 158 AIQETYLRGSILQ-LPDCAQYFMENLDRLAEAGYVPTKEDVLYAR--VRTNGVVQIQFS- 213
Query: 228 DDRGPLSDSYADKAGNPAIQTKYQLIRMNSKGLTGGFKCLGMLEDIRAIIFCISLADYDQ 287
P+ + +K G Y+L + + K + + E + A+IFC ++++YDQ
Sbjct: 214 ----PVGE---NKRGGEV----YRLYDVGGQR-NERRKWIHLFEGVNAVIFCAAISEYDQ 261
Query: 288 TWVQSSGEPCNKMIASRDLFEDVIRHPSFEDTPCVLLLNKYDAFEEKISRVPLTVCEWFA 347
+ E N+M+ +++LF+ V++ FE T +L LNK+D FE+KI +VPL+VCEWF
Sbjct: 262 MLFED--ETKNRMMETKELFDWVLKQRCFEKTSFILFLNKFDIFEKKIQKVPLSVCEWFK 319
Query: 348 DFSPVRPHHTSQTSLASHAYYYVAVKFKDLY--SSVAD--GRKLFVFQTKALERRTVDDA 403
D+ P+ P HAY +V KF++LY SS D R +++T AL+++ V
Sbjct: 320 DYQPIAPGKQE----VEHAYEFVKKKFEELYFQSSKPDRVDRVFKIYRTTALDQKLVKKT 375
Query: 404 FRYIREVLR 412
F+ I E +R
Sbjct: 376 FKLIDESMR 384
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,513,255
Number of extensions: 515091
Number of successful extensions: 1011
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 989
Number of HSP's successfully gapped: 5
Length of query: 440
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 336
Effective length of database: 11,605,545
Effective search space: 3899463120
Effective search space used: 3899463120
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)