BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0116300 Os10g0116300|AK106211
(101 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0116300 EF-Hand type domain containing protein 197 2e-51
Os09g0482840 Calcium-binding EF-hand domain containing protein 139 3e-34
Os09g0483100 EF-Hand type domain containing protein 136 3e-33
Os09g0483500 Calcium-binding EF-hand domain containing protein 133 3e-32
Os09g0483300 Calcium-binding EF-hand domain containing protein 132 5e-32
Os09g0482800 Calcium-binding EF-hand domain containing protein 120 2e-28
AK121706 120 2e-28
Os08g0502600 Calcium-binding EF-hand domain containing protein 100 2e-22
>Os10g0116300 EF-Hand type domain containing protein
Length = 101
Score = 197 bits (500), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/101 (100%), Positives = 101/101 (100%)
Query: 1 QRVRDVLLSYVEMANELMSLRMLDKHFGDDEAVMSADELVKLYRGLFAWFDRDGSGAVEL 60
QRVRDVLLSYVEMANELMSLRMLDKHFGDDEAVMSADELVKLYRGLFAWFDRDGSGAVEL
Sbjct: 1 QRVRDVLLSYVEMANELMSLRMLDKHFGDDEAVMSADELVKLYRGLFAWFDRDGSGAVEL 60
Query: 61 EEFRAEMKEVLLAVASGLGFLLVQMVVEDGRSVAKHLGGRL 101
EEFRAEMKEVLLAVASGLGFLLVQMVVEDGRSVAKHLGGRL
Sbjct: 61 EEFRAEMKEVLLAVASGLGFLLVQMVVEDGRSVAKHLGGRL 101
>Os09g0482840 Calcium-binding EF-hand domain containing protein
Length = 137
Score = 139 bits (351), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 78/87 (89%)
Query: 4 RDVLLSYVEMANELMSLRMLDKHFGDDEAVMSADELVKLYRGLFAWFDRDGSGAVELEEF 63
RD LLSY EMANELMSLR+LDKHFG DEA M ADELV+LY GLF FDRDGSGAV+LEEF
Sbjct: 36 RDGLLSYAEMANELMSLRVLDKHFGVDEAAMGADELVELYHGLFLRFDRDGSGAVDLEEF 95
Query: 64 RAEMKEVLLAVASGLGFLLVQMVVEDG 90
RAEMKEVLLAVA+GLGFL VQMVVE+G
Sbjct: 96 RAEMKEVLLAVANGLGFLPVQMVVEEG 122
>Os09g0483100 EF-Hand type domain containing protein
Length = 138
Score = 136 bits (343), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/88 (81%), Positives = 80/88 (90%), Gaps = 1/88 (1%)
Query: 4 RDVLLSYVEMANELMSLRMLDKHFG-DDEAVMSADELVKLYRGLFAWFDRDGSGAVELEE 62
RD LLSY EMA ELMSLR+L+KHFG DDEA M ADELV+LYRGLFA FDRDG+GAV+LEE
Sbjct: 36 RDGLLSYTEMAGELMSLRVLEKHFGVDDEAAMGADELVELYRGLFARFDRDGNGAVDLEE 95
Query: 63 FRAEMKEVLLAVASGLGFLLVQMVVEDG 90
FRAEMKE+LLAVA+GLGFL VQMVVE+G
Sbjct: 96 FRAEMKEMLLAVANGLGFLPVQMVVEEG 123
>Os09g0483500 Calcium-binding EF-hand domain containing protein
Length = 137
Score = 133 bits (334), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 78/87 (89%)
Query: 4 RDVLLSYVEMANELMSLRMLDKHFGDDEAVMSADELVKLYRGLFAWFDRDGSGAVELEEF 63
RD LLSY EMA ELMSLR+L+KHFG DEA MS+DELV++YRGL+A FD DG+G V+LEEF
Sbjct: 36 RDGLLSYSEMAKELMSLRVLEKHFGVDEAAMSSDELVEMYRGLYARFDHDGNGTVDLEEF 95
Query: 64 RAEMKEVLLAVASGLGFLLVQMVVEDG 90
RAEMKEV+LAVA+GLGFL VQMVVE+G
Sbjct: 96 RAEMKEVMLAVANGLGFLPVQMVVEEG 122
>Os09g0483300 Calcium-binding EF-hand domain containing protein
Length = 140
Score = 132 bits (332), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/89 (78%), Positives = 77/89 (86%), Gaps = 2/89 (2%)
Query: 4 RDVLLSYVEMANELMSLRMLDKHFG--DDEAVMSADELVKLYRGLFAWFDRDGSGAVELE 61
RD +LSY EMA ELMSLR+L+KHFG +DEA M ADEL LYRGLFA FDRDGSG V+LE
Sbjct: 36 RDGVLSYAEMAGELMSLRVLEKHFGADEDEAAMGADELAALYRGLFARFDRDGSGGVDLE 95
Query: 62 EFRAEMKEVLLAVASGLGFLLVQMVVEDG 90
EFRAEMKEVLLAVA+GLGFL VQMVVE+G
Sbjct: 96 EFRAEMKEVLLAVANGLGFLPVQMVVEEG 124
>Os09g0482800 Calcium-binding EF-hand domain containing protein
Length = 137
Score = 120 bits (301), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 76/98 (77%), Gaps = 4/98 (4%)
Query: 4 RDVLLSYVEMANELMSLRMLDKHFGDDEAVMSADELVKLYRGLFAWFDRDGSGAVELEEF 63
RD LSY +MA ELMSLR+L+ HFG D A + ELV LYRGLFA FDRDG GAV+ EEF
Sbjct: 36 RDGRLSYADMAGELMSLRVLETHFGVDGAAATDAELVDLYRGLFARFDRDGDGAVDREEF 95
Query: 64 RAEMKEVLLAVASGLGFLLVQMVVEDG----RSVAKHL 97
RAEMKEV+LAVASGLGFL VQMVVE+G R+V + L
Sbjct: 96 RAEMKEVMLAVASGLGFLPVQMVVEEGSFLKRAVEREL 133
>AK121706
Length = 137
Score = 120 bits (301), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 76/98 (77%), Gaps = 4/98 (4%)
Query: 4 RDVLLSYVEMANELMSLRMLDKHFGDDEAVMSADELVKLYRGLFAWFDRDGSGAVELEEF 63
RD LSY +MA ELMSLR+L+ HFG D A + ELV LYRGLFA FDRDG GAV+ EEF
Sbjct: 36 RDGRLSYADMAGELMSLRVLETHFGVDGAAATDAELVDLYRGLFARFDRDGDGAVDREEF 95
Query: 64 RAEMKEVLLAVASGLGFLLVQMVVEDG----RSVAKHL 97
RAEMKEV+LAVASGLGFL VQMVVE+G R+V + L
Sbjct: 96 RAEMKEVMLAVASGLGFLPVQMVVEEGSFLKRAVEREL 133
>Os08g0502600 Calcium-binding EF-hand domain containing protein
Length = 135
Score = 100 bits (250), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 4 RDVLLSYVEMANELMSLRMLDKHFGDDEAVMSADELVKLYRGLFAWFDRDGSGAVELEEF 63
RD +LSY +M+ ELM+LR+LD HFG LYRGLFA FDRDG G V L EF
Sbjct: 36 RDGVLSYADMSGELMALRVLDTHFG--VDDGHGGADDGLYRGLFARFDRDGDGKVGLHEF 93
Query: 64 RAEMKEVLLAVASGLGFLLVQMVVEDG 90
RAEMKEV+L VA+GLGFL VQMVVEDG
Sbjct: 94 RAEMKEVMLVVANGLGFLPVQMVVEDG 120
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.139 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,075,817
Number of extensions: 108975
Number of successful extensions: 461
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 458
Number of HSP's successfully gapped: 9
Length of query: 101
Length of database: 17,035,801
Length adjustment: 69
Effective length of query: 32
Effective length of database: 13,433,035
Effective search space: 429857120
Effective search space used: 429857120
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 149 (62.0 bits)