BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0556200 Os09g0556200|Os09g0556200
(658 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0556200 Octicosapeptide/Phox/Bem1p domain containing p... 1134 0.0
Os08g0296900 Octicosapeptide/Phox/Bem1p domain containing p... 452 e-127
Os09g0135400 Octicosapeptide/Phox/Bem1p domain containing p... 318 1e-86
Os10g0486900 Tetratricopeptide-like helical domain containi... 72 2e-12
Os03g0367000 Similar to Pasticcino 1-A 70 6e-12
>Os09g0556200 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 658
Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/635 (88%), Positives = 559/635 (88%)
Query: 24 PALDRSGSKVLDGDETIFTDMAQELKEEGNKLFQRREHERALLNYEKAIKLLPRGHPDVA 83
PALDRSGSKVLDGDETIFTDMAQELKEEGNKLFQRREHERALLNYEKAIKLLPRGHPDVA
Sbjct: 24 PALDRSGSKVLDGDETIFTDMAQELKEEGNKLFQRREHERALLNYEKAIKLLPRGHPDVA 83
Query: 84 YLHSNLAACYMQMSPPDHYRAINECNLALDASPRYSKALLKRARCFEALGRLDLAYRDVA 143
YLHSNLAACYMQMSPPDHYRAINECNLALDASPRYSKALLKRARCFEALGRLDLAYRDVA
Sbjct: 84 YLHSNLAACYMQMSPPDHYRAINECNLALDASPRYSKALLKRARCFEALGRLDLAYRDVA 143
Query: 144 KVLAVEPNNLTAIDVGDRVKKAMDEKGIVMDDKEAMPSPEEXXXXXXXXXXXXXXXXXXX 203
KVLAVEPNNLTAIDVGDRVKKAMDEKGIVMDDKEAMPSPEE
Sbjct: 144 KVLAVEPNNLTAIDVGDRVKKAMDEKGIVMDDKEAMPSPEEVVAAAPKQKPRKKKGRKAA 203
Query: 204 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFGEDIRWAQVPASCSMAQLREAVRSKF 263
LVFGEDIRWAQVPASCSMAQLREAVRSKF
Sbjct: 204 AKAAAAAVEEEEEAKVVEPVKEVEEPPRQVKLVFGEDIRWAQVPASCSMAQLREAVRSKF 263
Query: 264 PGLKAVLVKYKDKEGDLVTITNQDELKWAEDLAEPGSSLRLYVTEANPEHEPYLDDTNSG 323
PGLKAVLVKYKDKEGDLVTITNQDELKWAEDLAEPGSSLRLYVTEANPEHEPYLDDTNSG
Sbjct: 264 PGLKAVLVKYKDKEGDLVTITNQDELKWAEDLAEPGSSLRLYVTEANPEHEPYLDDTNSG 323
Query: 324 PLERNVNSDNGSTRSNRQDEDRSTVTCIDDWIVQFARLFKNHVGVSSDEYLDLHEVSMKL 383
PLERNVNSDNGSTRSNRQDEDRSTVTCIDDWIVQFARLFKNHVGVSSDEYLDLHEVSMKL
Sbjct: 324 PLERNVNSDNGSTRSNRQDEDRSTVTCIDDWIVQFARLFKNHVGVSSDEYLDLHEVSMKL 383
Query: 384 YXXXXXXXXXXXXXQEVFQLAESNFQEMAALAFFHWGNVHMSRARKRLLLPGDSPQESVL 443
Y QEVFQLAESNFQEMAALAFFHWGNVHMSRARKRLLLPGDSPQESVL
Sbjct: 384 YTEAIEDTITTEEAQEVFQLAESNFQEMAALAFFHWGNVHMSRARKRLLLPGDSPQESVL 443
Query: 444 EQVKEAYEWAKEEYNKAGRRYEEAVKAKPNFFEGFLALAHQHFEQAKLSWYYAIGSSVDL 503
EQVKEAYEWAKEEYNKAGRRYEEAVKAKPNFFEGFLALAHQHFEQAKLSWYYAIGSSVDL
Sbjct: 444 EQVKEAYEWAKEEYNKAGRRYEEAVKAKPNFFEGFLALAHQHFEQAKLSWYYAIGSSVDL 503
Query: 504 DTWPSSEVLELFNKAEDNXXXXXXXXXXXXXQRLKNRSKPSQENVVLEKMGLDEYIKDVS 563
DTWPSSEVLELFNKAEDN QRLKNRSKPSQENVVLEKMGLDEYIKDVS
Sbjct: 504 DTWPSSEVLELFNKAEDNMERGTEMWEEMEEQRLKNRSKPSQENVVLEKMGLDEYIKDVS 563
Query: 564 TDDAAEQASNMRSQINILWGMLLYERSVVEFKLGLPMWEDCLMAAIEKFKLGGASATDIA 623
TDDAAEQASNMRSQINILWGMLLYERSVVEFKLGLPMWEDCLMAAIEKFKLGGASATDIA
Sbjct: 564 TDDAAEQASNMRSQINILWGMLLYERSVVEFKLGLPMWEDCLMAAIEKFKLGGASATDIA 623
Query: 624 VLVKNHCANETAQDDQEAMGGSTLSSEFCELKKTR 658
VLVKNHCANETAQDDQEAMGGSTLSSEFCELKKTR
Sbjct: 624 VLVKNHCANETAQDDQEAMGGSTLSSEFCELKKTR 658
>Os08g0296900 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 774
Score = 452 bits (1163), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/409 (55%), Positives = 287/409 (70%), Gaps = 15/409 (3%)
Query: 235 LVFGEDIRWAQVPASCSMAQLREAVRSKFPGLKAVLVKYKDKEGDLVTITNQDELKWAED 294
LVFGEDIR AQ+PA+C+++QLR+ V++KFP LKA+L+KYKDKEGDLVTIT+ DEL+WA
Sbjct: 323 LVFGEDIRCAQMPANCNLSQLRDIVQNKFPSLKALLIKYKDKEGDLVTITSSDELRWAYS 382
Query: 295 LAEPGSSLRLYVTEANPEHEPYLD----DTNSGPLERNVNS--DNGSTRSNRQDEDRSTV 348
LA+ +RLY+ +P E +D ++ LE+ S +NGS+R D+D +
Sbjct: 383 LADLEGPIRLYIVAVDPAQELGVDVVRRRSSFASLEKAYYSMSENGSSR---HDDDHNC- 438
Query: 349 TCIDDWIVQFARLFKNHVGVSSDEYLDLHEVSMKLYXXXXXXXXXXXXXQEVFQLAESNF 408
IDDW++QFARLFKNH+G SD YLDLH++ M+LY QE+FQ+AE F
Sbjct: 439 -SIDDWMIQFARLFKNHLGFDSDSYLDLHDLGMRLYYEAMEDTVASEEAQEIFQVAELKF 497
Query: 409 QEMAALAFFHWGNVHMSRARKRLLLPGDSPQESVLEQVKEAYEWAKEEYNKAGRRYEEAV 468
QEMAALA F+WGNVHM+ ARKR L D+ E +LEQVK AYEWA EY KAG +Y EAV
Sbjct: 498 QEMAALALFNWGNVHMASARKRPPLSDDASMECILEQVKVAYEWACAEYAKAGAKYGEAV 557
Query: 469 KAKPNFFEGFLALAHQHFEQAKLSWYYAIGSSVDLDTWPSSEVLELFNKAEDNXXXXXXX 528
K KP+FFEG +AL Q FEQAKL WYYA+ +D+ T EVL LFN AEDN
Sbjct: 558 KTKPDFFEGLIALGQQQFEQAKLCWYYALACKIDMGT----EVLGLFNHAEDNMEKGMGM 613
Query: 529 XXXXXXQRLKNRSKPSQENVVLEKMGLDEYIKDVSTDDAAEQASNMRSQINILWGMLLYE 588
RL+ SKPS+E ++ EKMG+D Y+KD+S+D+A EQAS++RS +NILWG +LYE
Sbjct: 614 WEGMENTRLRGLSKPSKEKIIFEKMGIDGYMKDMSSDEAFEQASSIRSHVNILWGTILYE 673
Query: 589 RSVVEFKLGLPMWEDCLMAAIEKFKLGGASATDIAVLVKNHCANETAQD 637
RSVVEF LGLP WE+ L AIEKFK GGAS DI V+VKNH ANET Q+
Sbjct: 674 RSVVEFILGLPSWEESLTVAIEKFKTGGASPADINVMVKNHSANETTQE 722
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 112/142 (78%), Gaps = 2/142 (1%)
Query: 34 LDGDETIFTDMAQELKEEGNKLFQRREHERALLNYEKAIKLLPRG-HPDVA-YLHSNLAA 91
+DGDE +F ++++ELKEEG +LF RR++E A Y+KA++LLP G H D A +L + +A
Sbjct: 16 VDGDEEVFLELSRELKEEGGRLFNRRDYEGAAFKYDKAVQLLPSGGHADAAAHLRTCVAQ 75
Query: 92 CYMQMSPPDHYRAINECNLALDASPRYSKALLKRARCFEALGRLDLAYRDVAKVLAVEPN 151
CYM+M+P +H+RAI+ECNLAL+A+PRYS+ALL+RA CF+AL R DLA+ DV VLA EP
Sbjct: 76 CYMRMAPAEHHRAIHECNLALEAAPRYSRALLRRAACFQALDRPDLAWEDVRTVLAWEPA 135
Query: 152 NLTAIDVGDRVKKAMDEKGIVM 173
N A ++ D+V+ A++EKG+++
Sbjct: 136 NRAAREISDKVRAALEEKGVLV 157
>Os09g0135400 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 544
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/467 (38%), Positives = 265/467 (56%), Gaps = 50/467 (10%)
Query: 235 LVFGEDIRWAQVPASCSMAQLREAVRSKFPGLKAVLVKYKDKEGDLVTITNQDELKWAED 294
LV+ DIR AQ+P CS LRE V S+FP KAVL+KYKD +GDLVTIT EL+ AE
Sbjct: 66 LVYDHDIRLAQMPEKCSFRTLREVVASRFPSSKAVLIKYKDADGDLVTITCSAELRLAES 125
Query: 295 LAEPGSS---------------LRLYVTEANPEHEPYL----------------DDTNSG 323
+ S LRL++ E +P+ EP + + NS
Sbjct: 126 CVDIAGSEVIEDGARHGQKLPMLRLHIVEVSPDQEPPMPTEEEKLEQDNELLVKGEDNSP 185
Query: 324 PLERNVNSDNGSTRSNRQD----EDRSTVT---------C----IDDWIVQFARLFKNHV 366
V +D T+ + ++ +++T+T C IDDW++QFA LF+N V
Sbjct: 186 HASAAVVTDAEVTKQDVENVVAEAEQNTLTGKKDCGHAECKEAEIDDWLLQFADLFRNQV 245
Query: 367 GVSSDEYLDLHEVSMKLYXXXXXXXXXXXXXQEVFQLAESNFQEMAALAFFHWGNVHMSR 426
GV +D +LDLHE+ M+L Q +F++A + FQE+AALA F+WGNVHM
Sbjct: 246 GVDADAHLDLHELGMELCSEALEETVTSEEAQALFEMAAAKFQEVAALALFNWGNVHMCA 305
Query: 427 ARKRLLLPGDSPQESVLEQVKEAYEWAKEEYNKAGRRYEEAVKAKPNFFEGFLALAHQHF 486
ARKR+ L +P++ + Q+ AY+W ++ Y AG +YEEA+K KP+F+EG LAL QHF
Sbjct: 306 ARKRIPLDESAPKKVMSAQLCTAYDWVRDRYALAGSKYEEALKIKPDFYEGLLALGQQHF 365
Query: 487 EQAKLSWYYAIGSSVDLDTWPSSEVLELFNKAEDNXXXXXXXXXXXXXQRLKNRSKPSQE 546
E AKL W +A+ VDL W SS+ +LF+ AE QR+ +PS E
Sbjct: 366 ETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAATEMWEKVEEQRMAELKEPSSE 425
Query: 547 NVVLEKMGLD-EYIKDVSTDDAAEQASNMRSQINILWGMLLYERSVVEFKLGLPMWEDCL 605
+ K + + +++ ++AAEQA+ MR QI++ WG +L+ERS VEFKL + W+ L
Sbjct: 426 ALKKRKKQHNADGQGELTPEEAAEQAAVMRQQIHLFWGNMLFERSQVEFKLDIADWKKNL 485
Query: 606 MAAIEKFKLGGASATDIAVLVKNHCANETAQ-DDQEAMGGSTLSSEF 651
A+IE+FKL GAS +DI+ ++KNH +N ++ +D++ M T S+
Sbjct: 486 DASIERFKLAGASESDISAVLKNHFSNTVSECEDKKIMTLDTGISQI 532
>Os10g0486900 Tetratricopeptide-like helical domain containing protein
Length = 236
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 45 AQELKEEGNKLFQRREHERALLNYEKAIKL---LPRGHPDVAYLHSNLAACYMQMSPPDH 101
A + K EGNK F E+ERAL YE A+++ L + HSN A C++++ D
Sbjct: 64 ANDAKAEGNKFFGAGEYERALSQYETALQIAAELESAEDIRSACHSNRAVCFLKLGKYDE 123
Query: 102 YRAINECNLALDASPRYSKALLKRARCFEALGRLDLAYRDVAKVLAVEPNN 152
I EC AL+ +P Y KALL+R E L D A D+ K++ ++P+N
Sbjct: 124 --TIKECTKALELNPSYLKALLRRGEAHEKLEHYDEAIADMKKIIELDPSN 172
>Os03g0367000 Similar to Pasticcino 1-A
Length = 632
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 17/130 (13%)
Query: 43 DMAQELKEEGNKLFQRREHERALLNYEKAIKLLPRGHP-----------DVAYLHSNLAA 91
D A+++K GN+LF+ + E A YEK ++ HP + LH N+AA
Sbjct: 403 DDAEKIKTTGNRLFKEGKFELAKAKYEKVLREYNHVHPQDDDEGKIFANSRSSLHLNVAA 462
Query: 92 CYMQMSPPDHYRAINECNLALDASPRYSKALLKRARCFEALGRLDLAYRDVAKVLAV--- 148
CY +M ++ ++I+ CN L+A+P + KAL +R + LG D A +D K++AV
Sbjct: 463 CYQKMG--EYRKSIDTCNKVLEANPVHVKALYRRGMSYMLLGDFDDAKKDFEKMIAVDKS 520
Query: 149 -EPNNLTAID 157
EP+ A++
Sbjct: 521 SEPDATAALN 530
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.131 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,488,552
Number of extensions: 698744
Number of successful extensions: 2178
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2175
Number of HSP's successfully gapped: 7
Length of query: 658
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 551
Effective length of database: 11,448,903
Effective search space: 6308345553
Effective search space used: 6308345553
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 159 (65.9 bits)