Os08g0296900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Octicosapeptide/Phox/Bem1p domain containing protein.
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Os08g0296900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Octicosapeptide/Phox/Bem1p domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.53 | 0.347 | 12 | 0.143 | 1.44 | -0.049 | -0.173 | 1.66 | -0.26 | 3.77 | 20.2 | 3152 | -- | -- |
| 57.28 | 0.352 | 12 | -0.0434 | 1.43 | -0.337 | -0.0291 | -- | -0.317 | 3.69 | 12.9 | 26631 | -- | -- |
| 54.62 | 0.344 | 12 | 0.146 | 1.44 | -0.0451 | -- | 1.67 | -0.259 | 3.77 | 20.2 | 3163 | -- | -- |
| 56.88 | 0.351 | 12 | 0.11 | 1.45 | -0.513 | -- | -- | -0.294 | 3.73 | 13.8 | 47520 | -- | -- |
| 166.39 | 0.604 | 12 | -0.124 | -- | -0.418 | -- | 0.154 | -0.288 | -- | 20.2 | 3279 | -- | -- |
| 60.73 | 0.365 | 12.1 | -0.322 | 1.44 | -- | -0.158 | -- | -0.412 | 3.76 | -- | -- | -- | -- |
| 60.81 | 0.365 | 12.1 | -0.32 | 1.44 | -- | -- | -- | -0.411 | 3.76 | -- | -- | -- | -- |
| 166.51 | 0.604 | 12 | -0.151 | -- | -0.426 | -- | -- | -0.294 | -- | 20.2 | 3279 | -- | -- |
| 56.99 | 0.352 | 12 | -- | 1.44 | -0.452 | -- | -- | -0.313 | 3.75 | 13.48 | 47520 | -- | -- |
| 174.68 | 0.618 | 12.1 | -0.26 | -- | -- | -- | -- | -0.372 | -- | -- | -- | -- | -- |
| 63.5 | 0.373 | 12.1 | -- | 1.43 | -- | -- | -- | -0.375 | 3.76 | -- | -- | -- | -- |
| 167.09 | 0.604 | 12 | -- | -- | -0.448 | -- | -- | -0.274 | -- | 20.2 | 3279 | -- | -- |
| 176.46 | 0.62 | 12.1 | -- | -- | -- | -- | -- | -0.344 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.91 | humidity | 60.0 | 30 | > th | dose independent | rect. | 12 | 3 |
| 3 | 47.99 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 12 | 3 |
| 4 | 48.40 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 12 | 3 |
| 7 | 49.15 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 3 |
| 10 | 49.30 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 6 |
| 11 | 49.42 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 3 |
| 12 | 49.42 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 9 | 6 |
| 13 | 49.45 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 11 | 3 |
| 16 | 49.51 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 12 | 3 |
| 17 | 49.51 | wind | 1.0 | 90 | > th | dose dependent | rect. | 12 | 3 |
| 19 | 49.59 | wind | 3.0 | 90 | > th | dose independent | rect. | 12 | 3 |
| 25 | 49.75 | wind | 1.0 | 30 | > th | dose independent | rect. | 15 | 21 |
| 26 | 49.76 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 12 | 3 |
| 27 | 49.77 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 21 |
| 29 | 49.80 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 12 | 3 |
| 33 | 49.83 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 12 | 3 |
| 34 | 49.83 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 12 | 3 |
| 36 | 49.85 | temperature | 10.0 | 90 | > th | dose independent | rect. | 12 | 3 |
| 39 | 49.85 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 21 |
| 40 | 49.86 | radiation | 20.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 47 | 49.89 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 3 |
| 54 | 49.89 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 61 | 49.93 | wind | 9.0 | 90 | < th | dose independent | rect. | 12 | 3 |
| 71 | 50.00 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 75 | 50.06 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 15 | 21 |
| 77 | 50.06 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 15 | 21 |
| 83 | 50.21 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 5 |
| 102 | 50.46 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 12 | 16 |
| 103 | 50.47 | radiation | 40.0 | 90 | < th | dose independent | rect. | 12 | 3 |
| 105 | 50.53 | humidity | 90.0 | 90 | < th | dose independent | rect. | 12 | 3 |
| 124 | 50.62 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 10 | 5 |
| 129 | 50.67 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 5 |
| 131 | 50.68 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 19 |
| 132 | 50.68 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 136 | 50.70 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 19 |
| 146 | 50.78 | radiation | 1.0 | 30 | > th | dose independent | rect. | 12 | 3 |
| 149 | 50.85 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 5 |
| 151 | 50.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 5 |
| 153 | 50.85 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 19 |
| 155 | 50.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 5 |
| 156 | 50.86 | humidity | 50.0 | 90 | > th | dose independent | rect. | 15 | 21 |
| 157 | 50.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 19 |
| 159 | 50.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 19 |
| 165 | 50.94 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 5 |
| 173 | 51.04 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 21 |
| 180 | 51.09 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 183 | 51.09 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 184 | 51.09 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 16 |
| 196 | 51.17 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 8 |
| 201 | 51.19 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 5 |
| 207 | 51.25 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 21 | 17 |
| 217 | 51.34 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 16 |
| 221 | 51.36 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 21 | 17 |
| 240 | 51.44 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 241 | 51.44 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 22 | 17 |
| 315 | 51.69 | humidity | 90.0 | 270 | < th | dose independent | rect. | 10 | 5 |
| 319 | 51.70 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 8 |
| 320 | 51.70 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 8 |
| 329 | 51.73 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 8 |
| 331 | 51.73 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 8 |
| 332 | 51.73 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 8 |
| 333 | 51.73 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 16 |
| 342 | 51.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 9 |
| 343 | 51.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 347 | 51.78 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 16 |
| 349 | 51.78 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 16 |
| 355 | 51.79 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 363 | 51.80 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 8 |
| 375 | 51.82 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 12 | 3 |
| 393 | 51.88 | temperature | 30.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 398 | 51.91 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 16 |
| 400 | 51.91 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 15 | 21 |
| 404 | 51.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 17 |
| 414 | 51.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 9 |
| 415 | 51.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 9 |
| 416 | 51.95 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 439 | 51.99 | radiation | 1.0 | 270 | > th | dose independent | rect. | 10 | 5 |
| 450 | 52.01 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 19 |
| 451 | 52.02 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 454 | 52.03 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 12 | 16 |
| 466 | 52.07 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 19 |
| 493 | 52.12 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 7 |
| 500 | 52.13 | temperature | 30.0 | 30 | < th | dose independent | rect. | 15 | 21 |
| 518 | 52.15 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 15 | 21 |
| 527 | 52.18 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 19 |
| 532 | 52.20 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 17 |
| 539 | 52.21 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 16 |
| 542 | 52.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 7 |
| 543 | 52.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 17 |
| 545 | 52.23 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 8 |
| 553 | 52.26 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 9 |
| 554 | 52.26 | wind | 9.0 | 10 | < th | dose dependent | rect. | 12 | 3 |
| 601 | 52.33 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 7 |
| 604 | 52.33 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 17 |
| 612 | 52.36 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 7 |
| 614 | 52.36 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 7 |
| 620 | 52.37 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 18 |
| 642 | 52.42 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 8 |
| 663 | 52.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 17 |
| 665 | 52.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 17 |
| 709 | 52.53 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 8 |
| 739 | 52.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 6 |
| 845 | 52.73 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 22 | 17 |
| 855 | 52.76 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 10 | 16 |
| 924 | 52.87 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 10 | 4 |
| 936 | 52.90 | radiation | 1.0 | 30 | > th | dose independent | rect. | 12 | 7 |
| 958 | 52.93 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 8 |
| 992 | 52.98 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 12 | 3 |