Os09g0135400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Octicosapeptide/Phox/Bem1p domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0135400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Octicosapeptide/Phox/Bem1p domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.96 | 0.289 | 11.7 | 0.96 | 1.06 | -0.631 | -0.154 | 2.55 | -0.0654 | 17.4 | 10.88 | 1677 | -- | -- |
| 43.57 | 0.307 | 11.7 | 0.582 | 1.01 | -0.644 | -0.182 | -- | -0.105 | 17.6 | 9.833 | 8374 | -- | -- |
| 38.02 | 0.287 | 11.7 | 0.959 | 1.06 | -0.63 | -- | 2.55 | -0.0668 | 17.4 | 11.19 | 1666 | -- | -- |
| 43.5 | 0.307 | 11.7 | 0.523 | 1.02 | -0.603 | -- | -- | -0.15 | 17.5 | 8.12 | 8429 | -- | -- |
| 92.33 | 0.448 | 11.7 | 0.965 | -- | -0.679 | -- | 2.05 | -0.072 | -- | 14.59 | 2749 | -- | -- |
| 49.42 | 0.33 | 11.8 | 0.203 | 1.04 | -- | -0.152 | -- | -0.326 | 17.4 | -- | -- | -- | -- |
| 49.48 | 0.329 | 11.8 | 0.204 | 1.04 | -- | -- | -- | -0.327 | 17.4 | -- | -- | -- | -- |
| 97.89 | 0.461 | 11.7 | 0.543 | -- | -0.702 | -- | -- | -0.145 | -- | 3.806 | 8465 | -- | -- |
| 46.82 | 0.319 | 11.8 | -- | 1.02 | -0.461 | -- | -- | -0.275 | 17.5 | 14.07 | 1285 | -- | -- |
| 106.04 | 0.481 | 11.8 | 0.169 | -- | -- | -- | -- | -0.353 | -- | -- | -- | -- | -- |
| 50.57 | 0.333 | 11.8 | -- | 1.04 | -- | -- | -- | -0.35 | 17.4 | -- | -- | -- | -- |
| 99.45 | 0.464 | 11.7 | -- | -- | -0.615 | -- | -- | -0.27 | -- | 15.04 | 1289 | -- | -- |
| 106.8 | 0.482 | 11.8 | -- | -- | -- | -- | -- | -0.371 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.03 | temperature | 25 | 10 | < th | dose dependent | sin | 12 | NA |
| 8 | 34.42 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 23 | 34.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 27 | 34.91 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 12 |
| 28 | 34.91 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 20 |
| 36 | 34.96 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 41 | 34.97 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 110 | 35.41 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 213 | 35.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 263 | 35.98 | temperature | 25 | 720 | < th | dose independent | rect. | 14 | 10 |
| 325 | 36.17 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 335 | 36.20 | temperature | 25 | 720 | < th | dose independent | sin | 17 | NA |
| 383 | 36.33 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 389 | 36.35 | temperature | 15 | 10 | > th | dose dependent | sin | 12 | NA |
| 456 | 36.58 | radiation | 20 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 501 | 36.71 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 506 | 36.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 516 | 36.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 13 |
| 522 | 36.78 | radiation | 20 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 591 | 36.96 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 7 |
| 658 | 37.17 | temperature | 25 | 720 | > th | dose independent | sin | 17 | NA |
| 716 | 37.31 | temperature | 25 | 720 | > th | dose independent | rect. | 10 | 14 |
| 776 | 37.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 12 | 13 |
| 783 | 37.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 866 | 37.57 | temperature | 20 | 720 | > th | dose dependent | sin | 16 | NA |
| 880 | 37.59 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 889 | 37.60 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 914 | 37.62 | temperature | 10 | 1440 | > th | dose dependent | sin | 17 | NA |
| 955 | 37.66 | wind | 1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 968 | 37.67 | wind | 7 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 977 | 37.68 | humidity | 80 | 43200 | > th | dose dependent | rect. | 12 | 1 |