BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0135400 Os09g0135400|AK103761
(544 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G62390.1 | chr1:23084632-23086887 REVERSE LENGTH=752 526 e-150
AT2G25290.1 | chr2:10766192-10768517 REVERSE LENGTH=746 344 7e-95
AT4G32070.1 | chr4:15504662-15507097 REVERSE LENGTH=812 338 5e-93
AT5G20360.1 | chr5:6882121-6884630 REVERSE LENGTH=810 273 2e-73
>AT1G62390.1 | chr1:23084632-23086887 REVERSE LENGTH=752
Length = 751
Score = 526 bits (1356), Expect = e-150, Method: Compositional matrix adjust.
Identities = 285/472 (60%), Positives = 349/472 (73%), Gaps = 21/472 (4%)
Query: 60 RSRPLKLVYDHDIRLAQMPEKCSFRTLREVVASRFPSSKAVLIKYKDADGDLVTITCSAE 119
R RPLK VYDHDIRL QMP C F+ LRE+V+SRFPSSKAVLIKYKD DGDLVTIT +AE
Sbjct: 289 RWRPLKFVYDHDIRLGQMPVNCRFKELREIVSSRFPSSKAVLIKYKDNDGDLVTITSTAE 348
Query: 120 LRLAESCVDIAGSEVIEDGARHGQKLPMLRLHIVEVSPDQEPPMPTEEEKLEQDNELLVK 179
L+LAES D ++ E + MLRLH+V+VSP+QEP + EEE+ ++ ++ +
Sbjct: 349 LKLAESAADCILTK--EPDTDKSDSVGMLRLHVVDVSPEQEPMLLEEEEEEVEEKPVIEE 406
Query: 180 GEDNSPHASAAVVTDAEVTKQDVENVVAEAEQNTLTGKKDCGHAECKEAEIDDWLLQFAD 239
+ + + + E T ++VE A + ++ E KE E+DDWL FA
Sbjct: 407 VISSPTESLSETEINTEKTDKEVEKEKASSSED----------PETKELEMDDWLFDFAH 456
Query: 240 LFRNQVGVDADAHLDLHELGMELCSEALEETVTSEEAQALFEMAAAKFQEVAALALFNWG 299
LFR VG+D DAH+DLHELGMELCSEALEETVTSE+AQ LF+ A+AKFQEVAALA FNWG
Sbjct: 457 LFRTHVGIDPDAHIDLHELGMELCSEALEETVTSEKAQPLFDKASAKFQEVAALAFFNWG 516
Query: 300 NVHMCAARKRIPLDESAPKKVMSAQLCTAYDWVRDRYALAGSKYEEALKIKPDFYEGLLA 359
NVHMCAARKRIPLDESA K+V++AQL TAY+WV++RY LA KYE+AL IKPDFYEGLLA
Sbjct: 517 NVHMCAARKRIPLDESAGKEVVAAQLQTAYEWVKERYTLAKEKYEQALSIKPDFYEGLLA 576
Query: 360 LGQQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAATEMWEKVEEQRMAEL 419
LGQQ FE AKLHWS+ LA K+D+S WD S+T LFDSAE KM+ ATEMWEK+EEQRM +L
Sbjct: 577 LGQQQFEMAKLHWSYLLAQKIDISGWDPSETLNLFDSAEAKMKDATEMWEKLEEQRMDDL 636
Query: 420 KEPSS---EALKKRKKQHNADGQGELT----PEEAAEQAAVMRQQIHLFWGNMLFERSQV 472
K P+S E + KR+K+ DG E++ EEAAEQA MR QIHLFWGNMLFERSQV
Sbjct: 637 KNPNSNKKEEVSKRRKKQGGDGNEEVSETITAEEAAEQATAMRSQIHLFWGNMLFERSQV 696
Query: 473 EFKLDIADWKKNLDASIERFKLAGASESDISAVLKNHFSN--TVSECEDKKI 522
E K+ W KNLD+++ERFKLAGASE+DI+ V+KNH SN +E ++KK+
Sbjct: 697 ECKIGKDGWNKNLDSAVERFKLAGASEADIATVVKNHCSNEAAATEGDEKKV 748
>AT2G25290.1 | chr2:10766192-10768517 REVERSE LENGTH=746
Length = 745
Score = 344 bits (882), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 195/476 (40%), Positives = 286/476 (60%), Gaps = 56/476 (11%)
Query: 47 LKDK-ALMDKKVV--------TRSRPLKLVYDHDIRLAQMPEKCSFRTLREVVASRFPSS 97
L+DK A+MDK+V+ T +R +KLV+ DIR AQ+P S +R+V+ RFP+
Sbjct: 257 LEDKVAVMDKEVIASEIKEDATVTRTVKLVHGDDIRWAQLPLDSSVVLVRDVIKDRFPAL 316
Query: 98 KAVLIKYKDADGDLVTITCSAELRLAESCVDIAGSEVIEDGARHGQKLPMLRLHIVEVSP 157
K LIKY+D++GDLVTIT + ELRLA S +KL RL+I EVSP
Sbjct: 317 KGFLIKYRDSEGDLVTITTTDELRLAASTR---------------EKLGSFRLYIAEVSP 361
Query: 158 DQEPPMPTEEEKLEQDNELLVKGEDNSPHASAAVVTDAEVTKQDVENVVAEAEQNTLTGK 217
+QEP DN+ + D S++V + V
Sbjct: 362 NQEPTYDV------IDND---ESTDKFAKGSSSVADNGSVG------------------- 393
Query: 218 KDCGHAECKEAEIDDWLLQFADLFRNQVGVDADAHLDLHELGMELCSEALEETVTSEEAQ 277
D +E ++ W+ QFA LF+N VG D+D++L+LH LGM+L +EA+E+ VT E+AQ
Sbjct: 394 -DFVESEKASTSLEHWIFQFAQLFKNHVGFDSDSYLELHNLGMKLYTEAMEDIVTGEDAQ 452
Query: 278 ALFEMAAAKFQEVAALALFNWGNVHMCAARKRIPLDESAPKKVMSAQLCTAYDWVRDRYA 337
LF++AA KFQE+AALA+FNWGNVHM AR++I E ++ + ++ ++W ++ Y
Sbjct: 453 ELFDIAADKFQEMAALAMFNWGNVHMSKARRQIYFPEDGSRETILEKVEAGFEWAKNEYN 512
Query: 338 LAGSKYEEALKIKPDFYEGLLALGQQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSA 397
A KYE A+KIK DFYE LLALGQQ FE AKL W AL+ +VD+ + S KL++ A
Sbjct: 513 KAAEKYEGAVKIKSDFYEALLALGQQQFEQAKLCWYHALSGEVDIESDASQDVLKLYNKA 572
Query: 398 EHKMRAATEMWEKVEEQRMAELKEPSSEALKKRKKQHNADGQ-GELTPEEAAEQAAVMRQ 456
E M ++WE++EE+R+ + + + K+ ++ DG E + EE+AEQ A M
Sbjct: 573 EESMEKGMQIWEEMEERRLNGI--SNFDKHKELLQKLGLDGIFSEASDEESAEQTANMSS 630
Query: 457 QIHLFWGNMLFERSQVEFKLDIADWKKNLDASIERFKLAGASESDISAVLKNHFSN 512
QI+L WG++L+ERS VE+KL + W + L+ ++E+F+LAGAS +DI+ ++KNH S+
Sbjct: 631 QINLLWGSLLYERSIVEYKLGLPTWDECLEVAVEKFELAGASATDIAVMVKNHCSS 686
>AT4G32070.1 | chr4:15504662-15507097 REVERSE LENGTH=812
Length = 811
Score = 338 bits (866), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 187/459 (40%), Positives = 275/459 (59%), Gaps = 47/459 (10%)
Query: 55 KKVVTRSRPLKLVYDHDIRLAQMPEKCSFRTLREVVASRFPSSKAVLIKYKDADGDLVTI 114
K+ T +R +KLV+ DIR AQ+P + R +R+V+ RFP+ + LIKY+D +GDLVTI
Sbjct: 311 KEGATVTRTIKLVHGDDIRWAQLPLDSTVRLVRDVIRDRFPALRGFLIKYRDTEGDLVTI 370
Query: 115 TCSAELRLAESCVDIAGSEVIEDGARHGQKLPMLRLHIVEVSPDQEPPMPTEEEKLEQDN 174
T + ELRLA S D GS LRL+I EV+PDQEP
Sbjct: 371 TTTDELRLAASTHDKLGS---------------LRLYIAEVNPDQEPTYDG--------- 406
Query: 175 ELLVKGEDNSPHASAAVVTDAEVTKQDVENVVAEAEQNTLTGKKDCGHAE-CKEAEIDDW 233
+++ E T + + + + A+ ++ A C ++W
Sbjct: 407 -----------------MSNTESTDKVSKRLSSLADNGSVGEYVGSDKASGC----FENW 445
Query: 234 LLQFADLFRNQVGVDADAHLDLHELGMELCSEALEETVTSEEAQALFEMAAAKFQEVAAL 293
+ QFA LF+N VG D+D+++DLH+LGM+L +EA+E+ VT E+AQ LF++AA KFQE+ AL
Sbjct: 446 IFQFAQLFKNHVGFDSDSYVDLHDLGMKLYTEAMEDAVTGEDAQELFQIAADKFQEMGAL 505
Query: 294 ALFNWGNVHMCAARKRIPLDESAPKKVMSAQLCTAYDWVRDRYALAGSKYEEALKIKPDF 353
AL NWGNVHM ARK++ + E A ++ + + A+ W ++ Y A KYEEA+K+KPDF
Sbjct: 506 ALLNWGNVHMSKARKQVCIPEDASREAIIEAVEAAFVWTQNEYNKAAEKYEEAIKVKPDF 565
Query: 354 YEGLLALGQQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAATEMWEKVEE 413
YE LLALGQ+ FE AKL W AL KVDL + S + KL++ AE M ++WE++EE
Sbjct: 566 YEALLALGQEQFEHAKLCWYHALKSKVDLESEASQEVLKLYNKAEDSMERGMQIWEEMEE 625
Query: 414 QRMAELKEPSSEALKKRKKQHNADGQGELTPEEAAEQAAVMRQQIHLFWGNMLFERSQVE 473
R+ + + RK + + + E + EE EQ A M QI+L WG++L+ERS VE
Sbjct: 626 CRLNGISKLDKHKNMLRKLELD-ELFSEASEEETVEQTANMSSQINLLWGSLLYERSIVE 684
Query: 474 FKLDIADWKKNLDASIERFKLAGASESDISAVLKNHFSN 512
+KL + W + L+ ++E+F+LAGAS +DI+ ++KNH S+
Sbjct: 685 YKLGLPTWDECLEVAVEKFELAGASATDIAVMVKNHCSS 723
>AT5G20360.1 | chr5:6882121-6884630 REVERSE LENGTH=810
Length = 809
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/452 (35%), Positives = 250/452 (55%), Gaps = 63/452 (13%)
Query: 61 SRPLKLVYDHDIRLAQMPEKCSFRTLREVVASRFPSSKAVLIKYKDADGDLVTITCSAEL 120
++ +K VY DIRLA++P C+ LREVV RFPS +AV IKY+D +GDLVTIT EL
Sbjct: 359 NKDVKFVYSDDIRLAELPINCTLFKLREVVHERFPSLRAVHIKYRDQEGDLVTITTDEEL 418
Query: 121 RLAESCVDIAGSEVIEDGARHGQKLPMLRLHIVEVSPDQEPPMP--TEEEKLEQDNELLV 178
R++E G+ +R ++VEVSP+Q+P E +KL+
Sbjct: 419 RMSEVSSRSQGT---------------MRFYVVEVSPEQDPFFGRLVEMKKLK------- 456
Query: 179 KGEDNSPHASAAVVTDAEVTKQDVENVVAEAEQNTLTGKKDCGHAECKEAEIDDWLLQFA 238
+ A++ + + G+ C +++DW+++FA
Sbjct: 457 --------------------------ITADSFKAKVNGRGGC--------KVEDWMIEFA 482
Query: 239 DLFRNQVGVDADAHLDLHELGMELCSEALEETVTSEEAQALFEMAAAKFQEVAALALFNW 298
LF+ Q +D+D L+L ELGM+L SEA+EE VTS+ AQ F+ AA +FQEVAA +L N
Sbjct: 483 HLFKIQARIDSDRCLNLQELGMKLNSEAMEEVVTSDAAQGPFDRAAQQFQEVAARSLLNL 542
Query: 299 GNVHMCAARKRIPLDESAPKKVMSAQLCTAYDWVRDRYALAGSKYEEALKIKPDFYEGLL 358
G VHM ARKR+ L + + +S Q+ TAY+ + +A A KYEEA+KIKP+ +E L
Sbjct: 543 GYVHMSGARKRLSLLQGVSGESVSEQVKTAYECAKKEHANAKEKYEEAMKIKPECFEVFL 602
Query: 359 ALGQQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAATEMWEKVEEQRMAE 418
ALG Q FE A+L W + L +DL W + + + SAE ++ + E+ E +E + +E
Sbjct: 603 ALGLQQFEEARLSWYYVLVSHLDLKTWPYADVVQFYQSAESNIKKSMEVLENLETGKESE 662
Query: 419 LKEPSSEALKKRKKQHNADGQGELTPEEAAEQAAVMRQQIHLFWGNMLFERSQVEFKLDI 478
S+A K H D G T A++A ++ I + +L+ERS +E+KLD
Sbjct: 663 ----PSQAGKTDCLTHEKD-LGSSTQNNPAKEAGRLKSWIDILLCAVLYERSIMEYKLDQ 717
Query: 479 ADWKKNLDASIERFKLAGASESDISAVLKNHF 510
W+++L+A++E+F+LAG + D+ ++ +
Sbjct: 718 PFWRESLEAAMEKFELAGTCKDDVVEIISEDY 749
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.129 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,157,063
Number of extensions: 452767
Number of successful extensions: 1333
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1322
Number of HSP's successfully gapped: 6
Length of query: 544
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 441
Effective length of database: 8,282,721
Effective search space: 3652679961
Effective search space used: 3652679961
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 114 (48.5 bits)