BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0135400 Os09g0135400|AK103761
(544 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0135400 Octicosapeptide/Phox/Bem1p domain containing p... 1081 0.0
Os09g0556200 Octicosapeptide/Phox/Bem1p domain containing p... 366 e-101
Os08g0296900 Octicosapeptide/Phox/Bem1p domain containing p... 354 9e-98
AK110509 138 1e-32
>Os09g0135400 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 544
Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/544 (97%), Positives = 528/544 (97%)
Query: 1 MSKFNPSPPSPKLVPFXXXXXXXXXXXXXXXXQKVTPTPLVPSSLSLKDKALMDKKVVTR 60
MSKFNPSPPSPKLVPF QKVTPTPLVPSSLSLKDKALMDKKVVTR
Sbjct: 1 MSKFNPSPPSPKLVPFSNSPPSSANASAAESSQKVTPTPLVPSSLSLKDKALMDKKVVTR 60
Query: 61 SRPLKLVYDHDIRLAQMPEKCSFRTLREVVASRFPSSKAVLIKYKDADGDLVTITCSAEL 120
SRPLKLVYDHDIRLAQMPEKCSFRTLREVVASRFPSSKAVLIKYKDADGDLVTITCSAEL
Sbjct: 61 SRPLKLVYDHDIRLAQMPEKCSFRTLREVVASRFPSSKAVLIKYKDADGDLVTITCSAEL 120
Query: 121 RLAESCVDIAGSEVIEDGARHGQKLPMLRLHIVEVSPDQEPPMPTEEEKLEQDNELLVKG 180
RLAESCVDIAGSEVIEDGARHGQKLPMLRLHIVEVSPDQEPPMPTEEEKLEQDNELLVKG
Sbjct: 121 RLAESCVDIAGSEVIEDGARHGQKLPMLRLHIVEVSPDQEPPMPTEEEKLEQDNELLVKG 180
Query: 181 EDNSPHASAAVVTDAEVTKQDVENVVAEAEQNTLTGKKDCGHAECKEAEIDDWLLQFADL 240
EDNSPHASAAVVTDAEVTKQDVENVVAEAEQNTLTGKKDCGHAECKEAEIDDWLLQFADL
Sbjct: 181 EDNSPHASAAVVTDAEVTKQDVENVVAEAEQNTLTGKKDCGHAECKEAEIDDWLLQFADL 240
Query: 241 FRNQVGVDADAHLDLHELGMELCSEALEETVTSEEAQALFEMAAAKFQEVAALALFNWGN 300
FRNQVGVDADAHLDLHELGMELCSEALEETVTSEEAQALFEMAAAKFQEVAALALFNWGN
Sbjct: 241 FRNQVGVDADAHLDLHELGMELCSEALEETVTSEEAQALFEMAAAKFQEVAALALFNWGN 300
Query: 301 VHMCAARKRIPLDESAPKKVMSAQLCTAYDWVRDRYALAGSKYEEALKIKPDFYEGLLAL 360
VHMCAARKRIPLDESAPKKVMSAQLCTAYDWVRDRYALAGSKYEEALKIKPDFYEGLLAL
Sbjct: 301 VHMCAARKRIPLDESAPKKVMSAQLCTAYDWVRDRYALAGSKYEEALKIKPDFYEGLLAL 360
Query: 361 GQQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAATEMWEKVEEQRMAELK 420
GQQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAATEMWEKVEEQRMAELK
Sbjct: 361 GQQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAATEMWEKVEEQRMAELK 420
Query: 421 EPSSEALKKRKKQHNADGQGELTPEEAAEQAAVMRQQIHLFWGNMLFERSQVEFKLDIAD 480
EPSSEALKKRKKQHNADGQGELTPEEAAEQAAVMRQQIHLFWGNMLFERSQVEFKLDIAD
Sbjct: 421 EPSSEALKKRKKQHNADGQGELTPEEAAEQAAVMRQQIHLFWGNMLFERSQVEFKLDIAD 480
Query: 481 WKKNLDASIERFKLAGASESDISAVLKNHFSNTVSECEDKKIMTLDTGISQISNNIEDKC 540
WKKNLDASIERFKLAGASESDISAVLKNHFSNTVSECEDKKIMTLDTGISQISNNIEDKC
Sbjct: 481 WKKNLDASIERFKLAGASESDISAVLKNHFSNTVSECEDKKIMTLDTGISQISNNIEDKC 540
Query: 541 ILES 544
ILES
Sbjct: 541 ILES 544
>Os09g0556200 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 658
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/471 (42%), Positives = 291/471 (61%), Gaps = 50/471 (10%)
Query: 62 RPLKLVYDHDIRLAQMPEKCSFRTLREVVASRFPSSKAVLIKYKDADGDLVTITCSAELR 121
R +KLV+ DIR AQ+P CS LRE V S+FP KAVL+KYKD +GDLVTIT EL+
Sbjct: 231 RQVKLVFGEDIRWAQVPASCSMAQLREAVRSKFPGLKAVLVKYKDKEGDLVTITNQDELK 290
Query: 122 LAESCVDIAGSEVIEDGARHGQKLPMLRLHIVEVSPDQEPPMPTEEEKLEQDNELLVKGE 181
AE + S LRL++ E +P+ EP + +
Sbjct: 291 WAEDLAEPGSS---------------LRLYVTEANPEHEPYL----------------DD 319
Query: 182 DNSPHASAAVVTDAEVTKQDVENVVAEAEQNTLTGKKDCGHAECKEAEIDDWLLQFADLF 241
NS V +D T+ + ++ +++T+T C IDDW++QFA LF
Sbjct: 320 TNSGPLERNVNSDNGSTRSNRQD----EDRSTVT---------C----IDDWIVQFARLF 362
Query: 242 RNQVGVDADAHLDLHELGMELCSEALEETVTSEEAQALFEMAAAKFQEVAALALFNWGNV 301
+N VGV +D +LDLHE+ M+L +EA+E+T+T+EEAQ +F++A + FQE+AALA F+WGNV
Sbjct: 363 KNHVGVSSDEYLDLHEVSMKLYTEAIEDTITTEEAQEVFQLAESNFQEMAALAFFHWGNV 422
Query: 302 HMCAARKRIPLDESAPKKVMSAQLCTAYDWVRDRYALAGSKYEEALKIKPDFYEGLLALG 361
HM ARKR+ L +P++ + Q+ AY+W ++ Y AG +YEEA+K KP+F+EG LAL
Sbjct: 423 HMSRARKRLLLPGDSPQESVLEQVKEAYEWAKEEYNKAGRRYEEAVKAKPNFFEGFLALA 482
Query: 362 QQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAATEMWEKVEEQRMAELKE 421
QHFE AKL W +A+ VDL W SS+ +LF+ AE M TEMWE++EEQR+ +
Sbjct: 483 HQHFEQAKLSWYYAIGSSVDLDTWPSSEVLELFNKAEDNMERGTEMWEEMEEQRLKNRSK 542
Query: 422 PSSEALKKRKKQHNADGQGELTPEEAAEQAAVMRQQIHLFWGNMLFERSQVEFKLDIADW 481
PS E + K + + +++ ++AAEQA+ MR QI++ WG +L+ERS VEFKL + W
Sbjct: 543 PSQENVVLEKMGLD-EYIKDVSTDDAAEQASNMRSQINILWGMLLYERSVVEFKLGLPMW 601
Query: 482 KKNLDASIERFKLAGASESDISAVLKNHFSNTVSECEDKKIMTLDTGISQI 532
+ L A+IE+FKL GAS +DI+ ++KNH +N ++ +D++ M T S+
Sbjct: 602 EDCLMAAIEKFKLGGASATDIAVLVKNHCANETAQ-DDQEAMGGSTLSSEF 651
>Os08g0296900 Octicosapeptide/Phox/Bem1p domain containing protein
Length = 774
Score = 354 bits (908), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 193/456 (42%), Positives = 270/456 (59%), Gaps = 54/456 (11%)
Query: 62 RPLKLVYDHDIRLAQMPEKCSFRTLREVVASRFPSSKAVLIKYKDADGDLVTITCSAELR 121
+ LKLV+ DIR AQMP C+ LR++V ++FPS KA+LIKYKD +GDLVTIT S ELR
Sbjct: 319 KDLKLVFGEDIRCAQMPANCNLSQLRDIVQNKFPSLKALLIKYKDKEGDLVTITSSDELR 378
Query: 122 LAESCVDIAGSEVIEDGARHGQKLPMLRLHIVEVSPDQEPPMPTEEEKLEQDNELLVKGE 181
A S D+ G +RL+IV V P QE
Sbjct: 379 WAYSLADLEGP---------------IRLYIVAVDPAQE--------------------- 402
Query: 182 DNSPHASAAVVTDAEVTKQDVENVVAEAEQNTLTGKKDCGHAECKEAEIDDWLLQFADLF 241
+V ++ E +++ H + IDDW++QFA LF
Sbjct: 403 -----------LGVDVVRRRSSFASLEKAYYSMSENGSSRHDDDHNCSIDDWMIQFARLF 451
Query: 242 RNQVGVDADAHLDLHELGMELCSEALEETVTSEEAQALFEMAAAKFQEVAALALFNWGNV 301
+N +G D+D++LDLH+LGM L EA+E+TV SEEAQ +F++A KFQE+AALALFNWGNV
Sbjct: 452 KNHLGFDSDSYLDLHDLGMRLYYEAMEDTVASEEAQEIFQVAELKFQEMAALALFNWGNV 511
Query: 302 HMCAARKRIPLDESAPKKVMSAQLCTAYDWVRDRYALAGSKYEEALKIKPDFYEGLLALG 361
HM +ARKR PL + A + + Q+ AY+W YA AG+KY EA+K KPDF+EGL+ALG
Sbjct: 512 HMASARKRPPLSDDASMECILEQVKVAYEWACAEYAKAGAKYGEAVKTKPDFFEGLIALG 571
Query: 362 QQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAATEMWEKVEEQRMAELKE 421
QQ FE AKL W +ALA K+D+ ++ LF+ AE M MWE +E R+ L +
Sbjct: 572 QQQFEQAKLCWYYALACKIDM----GTEVLGLFNHAEDNMEKGMGMWEGMENTRLRGLSK 627
Query: 422 PSSEALKKRKKQHNADG-QGELTPEEAAEQAAVMRQQIHLFWGNMLFERSQVEFKLDIAD 480
PS E + K DG +++ +EA EQA+ +R +++ WG +L+ERS VEF L +
Sbjct: 628 PSKEKIIFEKM--GIDGYMKDMSSDEAFEQASSIRSHVNILWGTILYERSVVEFILGLPS 685
Query: 481 WKKNLDASIERFKLAGASESDISAVLKNHFSNTVSE 516
W+++L +IE+FK GAS +DI+ ++KNH +N ++
Sbjct: 686 WEESLTVAIEKFKTGGASPADINVMVKNHSANETTQ 721
>AK110509
Length = 572
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 208/482 (43%), Gaps = 73/482 (15%)
Query: 65 KLVYDHDIRLAQMPEKCSFRTLREVVASRFPSSKAVLIKYKDADGDLVTITCSAELRLAE 124
K+ ++ RL Q+ + L V ++FP++ VL+KY D DGDLVTITC
Sbjct: 71 KVTLGNETRLVQLTAAAGYGDLLGQVKAKFPNAGHVLLKYVDKDGDLVTITC-------R 123
Query: 125 SCVDIAGSEVIEDGARHGQKLPMLRLHIVEVSPDQE-PPMPTEEEKLEQDNELLVKGEDN 183
S V A +E ++ R +P +++ V V+ E P +P +E ++
Sbjct: 124 SDVQTALAEALKAMDRRLGVIPPIKIACVPVADASEVPQIPYDE----------LQEAAQ 173
Query: 184 SPHASAAVVTDAEVTKQDVENVVAEAEQNTLTGKKDCGHAECKEAEIDDWLLQFADLFRN 243
+ A Q + V + T +G+ EIDDWL+ FA+LFR
Sbjct: 174 LMLQQQQQLAAAAAAAQQQQQVQQKQMAQTTSGEI---------IEIDDWLVDFANLFRE 224
Query: 244 QVGVDADAHLDLHELGMELCSEALEETVTSEEAQALFEMAAAKFQEVAALALFNWGNVHM 303
G+DAD H+D H G S+A++ + SEEA LF+ A +F+EV A+ +WGN+ +
Sbjct: 225 MSGIDADRHIDPHNEGWAATSKAMDVMLGSEEAAPLFDKAIQRFKEVIAIGYLSWGNIFI 284
Query: 304 CAARKRIPLDESAPKKV---MSAQLCTAYDWVRDRYALAGSKYEEALKIKPDFYEGLLAL 360
C K + + A +V ++A+L D A +K ++AL++K D EGL L
Sbjct: 285 CKGHKAMEIAALAEGEVDAELAAKLTAELD-------AAEAKVKQALEVKDDLVEGLTTL 337
Query: 361 GQQHFETAKLHWSF----------ALADK-----------------------VDLSAWDS 387
+ AK+ F LA+ + A D
Sbjct: 338 AGIEVDRAKVAAKFLVKPTPPAPEGLAEGSKEAEAAAKAAQEANAAATREALTKIKAADV 397
Query: 388 SQTFKLFDSAEHKMRAATEMWEKVEEQRMAELKEPSSEALKKRKKQHNADGQGELTPEEA 447
++A + A + +VE+QR AE + E Q +
Sbjct: 398 EAAKPHIEAAHEWYKKAHAVGLQVEQQRKAEQEAKHKEQAANADAAAAGSQQQQQEGTNP 457
Query: 448 AEQAAVMRQQIHLFWGNMLFERSQVEFKLDIADWKKNLDASIERFKLAGASESDISAVLK 507
E + Q+ +GNML+E SQV + +W+ LD + RF+ AG +E DI + LK
Sbjct: 458 GEMSLSAHAQV--LYGNMLYEWSQVLASVG-QEWRHLLDDAAARFRDAGCAEKDIRSALK 514
Query: 508 NH 509
NH
Sbjct: 515 NH 516
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.129 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,411,745
Number of extensions: 705123
Number of successful extensions: 2089
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 2080
Number of HSP's successfully gapped: 5
Length of query: 544
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 438
Effective length of database: 11,501,117
Effective search space: 5037489246
Effective search space used: 5037489246
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 158 (65.5 bits)