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Os09g0556200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Octicosapeptide/Phox/Bem1p domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.69 (0.0151) R2 : 0.391
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.623 (0.0374) R2dC : 0.373 R2C : 0.365
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.122 (0.0318) R2dN8 : 0.0256 R2N8 : 0.0185
σ : 0.285
deviance : 37.04
__
_____
C
peak time of C : 9.22
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.11 0.274 8.71 -0.309 0.692 0.767 -0.133 -3.43 0.137 8.79 29.9 344 -- --
34.44 0.273 8.69 -0.13 0.723 0.446 -0.0528 -- 0.137 8.61 29.45 410 -- --
34.15 0.272 8.71 -0.337 0.696 0.779 -- -3.62 0.138 8.8 29.92 398 -- --
34.28 0.273 8.69 -0.101 0.688 0.401 -- -- 0.14 8.81 30.39 331 -- --
58.67 0.359 8.71 -0.12 -- 0.406 -- -1.11 0.129 -- 29.92 398 -- --
36.75 0.284 8.69 -0.057 0.622 -- -0.22 -- 0.115 9.18 -- -- -- --
36.92 0.285 8.69 -0.0647 0.623 -- -- -- 0.115 9.21 -- -- -- --
57.48 0.353 8.71 -0.127 -- 0.192 -- -- 0.141 -- 29.66 5778 -- --
34.55 0.274 8.68 -- 0.688 0.404 -- -- 0.149 8.81 30.6 327 -- --
59.43 0.36 8.71 -0.0669 -- -- -- -- 0.118 -- -- -- -- --
37.04 0.285 8.69 -- 0.623 -- -- -- 0.122 9.22 -- -- -- --
57.86 0.354 8.7 -- -- 0.179 -- -- 0.154 -- 30 5799 -- --
59.55 0.36 8.71 -- -- -- -- -- 0.126 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.93 temperature 30.0 90 < th dose independent rect. 8 21
2 32.13 radiation 1.0 30 > th dose independent rect. 18 14
4 32.19 humidity 50.0 90 > th dose independent rect. 8 21
7 32.28 temperature 15.0 30 > th dose dependent rect. 5 3
9 32.29 humidity 50.0 270 > th dose independent rect. 6 23
18 32.41 radiation 1.0 90 > th dose dependent rect. 17 14
22 32.44 wind 3.0 90 < th dose independent rect. 5 3
27 32.51 wind 5.0 90 < th dose dependent rect. 5 3
28 32.51 temperature 20.0 10 > th dose dependent rect. 14 18
30 32.54 radiation 1.0 90 > th dose independent sin 12 NA
31 32.54 radiation 1.0 90 < th dose dependent sin 11 NA
32 32.55 radiation 1.0 30 > th dose independent rect. 5 3
47 32.57 radiation 1.0 90 < th dose independent sin 12 NA
63 32.59 temperature 20.0 30 > th dose independent rect. 5 3
65 32.61 wind 9.0 90 < th dose independent rect. 8 21
77 32.65 precipitation 0.1 90 < th dose independent rect. 8 21
78 32.65 precipitation 0.1 90 < th dose dependent rect. 8 21
89 32.70 temperature 15.0 30 > th dose independent rect. 8 21
108 32.74 atmosphere 995.0 90 > th dose independent rect. 8 21
111 32.75 humidity 90.0 4320 < th dose independent rect. 4 2
140 32.84 precipitation 0.1 90 < th dose independent rect. 5 3
145 32.84 precipitation 0.1 90 < th dose dependent rect. 5 3
150 32.86 humidity 80.0 270 > th dose independent rect. 4 2
152 32.86 temperature 10.0 90 > th dose independent rect. 5 3
154 32.86 temperature 30.0 90 < th dose independent rect. 5 3
155 32.86 humidity 50.0 90 > th dose independent rect. 5 3
157 32.86 atmosphere 995.0 90 > th dose independent rect. 5 3
158 32.86 atmosphere 1015.0 90 < th dose independent rect. 5 3
168 32.89 radiation 40.0 90 < th dose independent rect. 5 3
171 32.90 radiation 1.0 90 > th dose independent rect. 14 18
174 32.91 humidity 90.0 4320 > th dose independent rect. 4 1
205 32.96 temperature 20.0 10 > th dose independent rect. 14 18
219 33.00 humidity 80.0 270 > th dose independent rect. 3 4
258 33.05 humidity 50.0 90 > th dose dependent rect. 5 3
264 33.06 humidity 80.0 270 > th dose independent rect. 2 7
308 33.09 temperature 10.0 10 > th dose dependent rect. 17 15
323 33.13 atmosphere 1015.0 90 < th dose dependent rect. 5 2
338 33.15 radiation 1.0 90 > th dose dependent rect. 5 2
402 33.22 humidity 90.0 4320 < th dose independent rect. 23 7
417 33.24 humidity 60.0 270 > th dose independent rect. 17 10
423 33.25 wind 7.0 90 < th dose independent rect. 19 10
424 33.25 humidity 70.0 90 > th dose independent rect. 19 10
425 33.25 temperature 20.0 10 > th dose independent rect. 17 15
451 33.29 wind 1.0 90 > th dose independent rect. 8 21
452 33.29 atmosphere 1015.0 30 < th dose independent rect. 8 21
487 33.33 temperature 15.0 90 > th dose independent rect. 19 10
488 33.33 temperature 30.0 270 < th dose independent rect. 17 10
496 33.33 radiation 40.0 90 < th dose dependent rect. 5 3
501 33.34 humidity 80.0 270 < th dose independent rect. 23 12
506 33.34 humidity 80.0 4320 > th dose dependent rect. 3 3
509 33.35 precipitation 0.1 90 < th dose independent rect. 19 10
516 33.35 humidity 70.0 270 > th dose dependent rect. 3 4
517 33.35 precipitation 0.1 90 < th dose dependent rect. 19 10
539 33.37 temperature 10.0 270 > th dose dependent rect. 11 21
542 33.38 radiation 1.0 10 < th dose independent rect. 20 18
552 33.39 radiation 1.0 10 < th dose independent rect. 20 16
565 33.40 radiation 1.0 90 < th dose dependent rect. 19 10
570 33.41 atmosphere 995.0 14400 > th dose independent rect. 7 1
593 33.43 wind 9.0 1440 < th dose independent rect. 6 3
594 33.43 temperature 10.0 1440 > th dose independent rect. 6 3
597 33.43 humidity 50.0 1440 > th dose independent rect. 6 3
599 33.43 atmosphere 995.0 1440 > th dose independent rect. 6 3
600 33.43 atmosphere 1015.0 1440 < th dose independent rect. 6 3
606 33.43 temperature 30.0 90 < th dose independent rect. 19 10
607 33.43 humidity 50.0 90 > th dose independent rect. 19 10
609 33.43 atmosphere 995.0 90 > th dose independent rect. 19 10
610 33.43 radiation 20.0 90 < th dose independent rect. 19 10
614 33.43 radiation 1.0 10 < th dose independent rect. 20 12
616 33.43 temperature 10.0 90 > th dose independent rect. 5 14
617 33.43 atmosphere 1015.0 90 < th dose independent rect. 5 14
620 33.43 temperature 10.0 1440 > th dose independent rect. 9 21
647 33.44 radiation 1.0 90 < th dose independent rect. 19 10
658 33.44 atmosphere 995.0 30 > th dose dependent rect. 5 3
697 33.47 radiation 10.0 270 < th dose dependent rect. 17 10
719 33.49 radiation 1.0 10 < th dose independent rect. 20 10
723 33.49 radiation 1.0 90 < th dose dependent rect. 19 22
726 33.50 temperature 30.0 270 < th dose independent rect. 7 9
734 33.50 wind 9.0 270 < th dose dependent rect. 3 4
749 33.51 radiation 1.0 30 < th dose dependent rect. 20 18
769 33.52 humidity 60.0 270 > th dose independent rect. 7 9
777 33.53 wind 7.0 270 < th dose independent rect. 3 4
779 33.53 temperature 10.0 270 > th dose independent rect. 3 4
781 33.53 temperature 30.0 270 < th dose independent rect. 3 4
782 33.53 humidity 50.0 270 > th dose independent rect. 3 4
784 33.53 atmosphere 995.0 270 > th dose independent rect. 3 4
785 33.53 atmosphere 1015.0 270 < th dose independent rect. 3 4
786 33.53 radiation 30.0 270 < th dose independent rect. 3 4
788 33.53 precipitation 0.1 270 < th dose independent rect. 3 4
797 33.53 precipitation 0.1 270 < th dose dependent rect. 3 4
801 33.53 radiation 1.0 30 < th dose dependent rect. 20 16
818 33.54 radiation 1.0 90 > th dose independent rect. 11 22
841 33.55 precipitation 0.1 4320 < th dose independent rect. 17 5
848 33.55 humidity 50.0 4320 > th dose dependent rect. 3 1
851 33.55 precipitation 0.1 4320 < th dose dependent rect. 17 5
852 33.55 radiation 1.0 30 < th dose dependent rect. 20 12
872 33.56 atmosphere 1005.0 90 > th dose independent rect. 8 21
879 33.57 wind 1.0 90 > th dose independent rect. 5 3
887 33.57 atmosphere 1015.0 270 < th dose dependent rect. 3 4
893 33.58 precipitation 0.1 4320 > th dose independent rect. 17 5
912 33.59 radiation 40.0 270 < th dose dependent rect. 3 4
933 33.60 humidity 90.0 4320 < th dose dependent rect. 23 7
950 33.61 humidity 80.0 270 > th dose dependent rect. 3 6
960 33.62 humidity 80.0 270 > th dose independent sin 7 NA
983 33.63 atmosphere 995.0 10 > th dose independent rect. 8 9
993 33.63 humidity 60.0 4320 > th dose dependent rect. 23 7
999 33.64 humidity 80.0 90 > th dose independent rect. 5 6