BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0555100 Os09g0555100|Os09g0555100
(387 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0555100 Auxin Efflux Carrier family protein 796 0.0
Os09g0554300 Auxin Efflux Carrier family protein 641 0.0
Os09g0491740 Auxin Efflux Carrier family protein 284 1e-76
Os01g0818000 Auxin Efflux Carrier family protein 189 3e-48
Os05g0481900 Auxin Efflux Carrier family protein 187 1e-47
Os08g0191000 Auxin Efflux Carrier family protein 173 2e-43
>Os09g0555100 Auxin Efflux Carrier family protein
Length = 387
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/387 (100%), Positives = 387/387 (100%)
Query: 1 MGFLALLLVASMPVVQVLLIGVVGAFLASGYSNILTSSALSDMNKVVFTVFTPSLMFASL 60
MGFLALLLVASMPVVQVLLIGVVGAFLASGYSNILTSSALSDMNKVVFTVFTPSLMFASL
Sbjct: 1 MGFLALLLVASMPVVQVLLIGVVGAFLASGYSNILTSSALSDMNKVVFTVFTPSLMFASL 60
Query: 61 ARTVTFSDVISWWFMPINIGITFMAGGTLGWIACRILKPPQHFRGMIIAFCSAGNLGNLL 120
ARTVTFSDVISWWFMPINIGITFMAGGTLGWIACRILKPPQHFRGMIIAFCSAGNLGNLL
Sbjct: 61 ARTVTFSDVISWWFMPINIGITFMAGGTLGWIACRILKPPQHFRGMIIAFCSAGNLGNLL 120
Query: 121 LIVVPAVCDEDGNPFGKDSSRCRSLGLSYSSLSMALGGLYIWTHTYSLMKKKRDQMYHQP 180
LIVVPAVCDEDGNPFGKDSSRCRSLGLSYSSLSMALGGLYIWTHTYSLMKKKRDQMYHQP
Sbjct: 121 LIVVPAVCDEDGNPFGKDSSRCRSLGLSYSSLSMALGGLYIWTHTYSLMKKKRDQMYHQP 180
Query: 181 NSTQCLDDSDEEHHSKKFKANGEAAYADEEATLPVSAKLAQHNEENQMEAPLLSCESKVA 240
NSTQCLDDSDEEHHSKKFKANGEAAYADEEATLPVSAKLAQHNEENQMEAPLLSCESKVA
Sbjct: 181 NSTQCLDDSDEEHHSKKFKANGEAAYADEEATLPVSAKLAQHNEENQMEAPLLSCESKVA 240
Query: 241 KKCSWTTTNLKDTIHHVVEELMAPPTLSAILGFVFGLVPWLKSLVIGDGAPLRVIQDSIQ 300
KKCSWTTTNLKDTIHHVVEELMAPPTLSAILGFVFGLVPWLKSLVIGDGAPLRVIQDSIQ
Sbjct: 241 KKCSWTTTNLKDTIHHVVEELMAPPTLSAILGFVFGLVPWLKSLVIGDGAPLRVIQDSIQ 300
Query: 301 LMGNGTIPCVTLILGGNLIKGLRKSELKRTVIIAIVCIRYVILPLVGIAVVHGAYWVGFL 360
LMGNGTIPCVTLILGGNLIKGLRKSELKRTVIIAIVCIRYVILPLVGIAVVHGAYWVGFL
Sbjct: 301 LMGNGTIPCVTLILGGNLIKGLRKSELKRTVIIAIVCIRYVILPLVGIAVVHGAYWVGFL 360
Query: 361 PHDPLYRYVLMMQFALPPAMTIGNLSL 387
PHDPLYRYVLMMQFALPPAMTIGNLSL
Sbjct: 361 PHDPLYRYVLMMQFALPPAMTIGNLSL 387
>Os09g0554300 Auxin Efflux Carrier family protein
Length = 428
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/393 (80%), Positives = 348/393 (88%), Gaps = 9/393 (2%)
Query: 1 MGFLALLLVASMPVVQVLLIGVVGAFLASGYSNILTSSALSDMNKVVFTVFTPSLMFASL 60
MGFL+LLLVASMP+VQVLLIGV+GAFLASGYS ILTSSAL DMNKVVFTVFTPSLMFASL
Sbjct: 1 MGFLSLLLVASMPIVQVLLIGVIGAFLASGYSKILTSSALRDMNKVVFTVFTPSLMFASL 60
Query: 61 ARTVTFSDVISWWFMPINIGITFMAGGTLGWIACRILKPPQHFRGMIIAFCSAGNLGNLL 120
A+TVT SDVISWWFMP+NIGITF+ GGTLGWIAC+ILKPPQHFRGMIIAFCSAGNLGNLL
Sbjct: 61 AKTVTLSDVISWWFMPVNIGITFIVGGTLGWIACKILKPPQHFRGMIIAFCSAGNLGNLL 120
Query: 121 LIVVPAVCDEDGNPFGKDSSRCRSLGLSYSSLSMALGGLYIWTHTYSLMKKKRDQMYH-- 178
LI+VPAVCDEDGNPFGKD S CRS GLSYSSLSMALGGL+IWTHTYSLM+K +MYH
Sbjct: 121 LIIVPAVCDEDGNPFGKDRSLCRSRGLSYSSLSMALGGLFIWTHTYSLMQKA-GKMYHKM 179
Query: 179 QPNSTQCLDDSDEEHH----SKKFKANGEAAYADEEATLPVSAKLA-QHNEENQMEAPLL 233
Q S QC DSDEEHH + K +GE AYADEEA L VSAKLA +HNEENQMEAPLL
Sbjct: 180 QSKSIQCPADSDEEHHPAQGHDQVKLDGETAYADEEAALLVSAKLAPEHNEENQMEAPLL 239
Query: 234 SCESKVAKKCSWTTTNLKDTIHHVVEELMAPPTLSAILGFVFGLVPWLKSLVIGDGAPLR 293
+CE ++A K + TNLK+T+H VVEELMAPPT+SAILGFV GLVPWLKSLVIG+GAPLR
Sbjct: 240 TCEREIANKGGF-WTNLKETVHQVVEELMAPPTVSAILGFVVGLVPWLKSLVIGNGAPLR 298
Query: 294 VIQDSIQLMGNGTIPCVTLILGGNLIKGLRKSELKRTVIIAIVCIRYVILPLVGIAVVHG 353
VIQ+S+QLMGNGTIPC+TLILGGNL +GLRKS LKRTVII IVCIRYVI PL+G+AVVH
Sbjct: 299 VIQESLQLMGNGTIPCITLILGGNLTQGLRKSVLKRTVIITIVCIRYVIQPLIGMAVVHA 358
Query: 354 AYWVGFLPHDPLYRYVLMMQFALPPAMTIGNLS 386
AY VGFLPHDPLYRYVLMMQFALPPAM IG ++
Sbjct: 359 AYGVGFLPHDPLYRYVLMMQFALPPAMNIGTMA 391
>Os09g0491740 Auxin Efflux Carrier family protein
Length = 379
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/393 (37%), Positives = 233/393 (59%), Gaps = 30/393 (7%)
Query: 1 MGFLALLLVASMPVVQVLLIGVVGAFLASGYSNILTSSALSDMNKVVFTVFTPSLMFASL 60
MG L L + A +PV+ +LL+ VG+FLA+ + IL A +N +VF VF PSL+ L
Sbjct: 1 MGLLELFITACVPVLNMLLVTGVGSFLATDFVGILNKDARKYLNNIVFYVFNPSLVATYL 60
Query: 61 ARTVTFSDVISWWFMPINIGITFMAGGTLGWIACRILKPPQHFRGMIIAFCSAGNLGNLL 120
A+T+T + WFMP+NI + G LGWI + + P RG+I+ CSAGN GN+
Sbjct: 61 AQTITLEGLAKLWFMPVNILLACTFGLILGWIVVHVTRAPARLRGLILGCCSAGNWGNIF 120
Query: 121 LIVVPAVCDEDGNPFGKDSSRCRSLGLSYSSLSMALGGLYIWTHTYSLMKKKRDQMYHQP 180
LI++PA+C E G+PFG C + GL+YSSLSMALG +++WT Y++M+
Sbjct: 121 LIIIPALCKEKGSPFGAPDV-CHTYGLAYSSLSMALGAVFLWTVAYNIMRA--------- 170
Query: 181 NSTQCLDDSDEEHHSKKFKANGEAAYADEEATLPVSAKLAQHNEENQMEAPLLSCESKVA 240
+++ D+ + + K +G + E L + N+ NQ PL+S S +
Sbjct: 171 -TSKVADEGNARTNDTKVSNSGSSTGTASEENLSIP------NDNNQCTLPLISNSSVPS 223
Query: 241 KKCSWTTTNLKDTIHHVV---------EELMAPPTLSAILGFVFGLVPWLKSLVIGDGAP 291
K T L + V +++ AP T++ I+GF+ G P +++ +IG+ AP
Sbjct: 224 SK---TKVTLSERAKRFVSSMFGAIDFKKIFAPSTIAVIIGFIIGGTPLIRNAIIGENAP 280
Query: 292 LRVIQDSIQLMGNGTIPCVTLILGGNLIKGLR-KSELKRTVIIAIVCIRYVILPLVGIAV 350
LRVI +S L+G G IP VTLI+GGNL+ GLR ++ ++ +VI +++ +RY++LP +G +
Sbjct: 281 LRVIHESADLIGGGAIPSVTLIMGGNLLNGLRGEASVQPSVIASVIVVRYILLPSLGTLL 340
Query: 351 VHGAYWVGFLPHDPLYRYVLMMQFALPPAMTIG 383
V A +G + DPLY+++L++Q+A+PPAM IG
Sbjct: 341 VKSAVHLGLIHPDPLYQFILLLQYAVPPAMNIG 373
>Os01g0818000 Auxin Efflux Carrier family protein
Length = 432
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 208/393 (52%), Gaps = 34/393 (8%)
Query: 6 LLLVASMPVVQVLLIGVVGAFLASGYSNILTSSALSDMNKVVFTVFTPSLMFASLARTVT 65
+L A +P+ +V + +G +AS Y NIL + +N +VF++ P L+F+ L R +T
Sbjct: 26 MLKYAVLPIAKVFTVCFMGFLMASKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGRAIT 85
Query: 66 FSDVISWWFMPINIGITFMAGGTLGWIACRILKPPQHFRGMIIAFCSAGNLGNLLLIVVP 125
++ WW++P+NI + ++G +G++ I++PP + + GN+GN+ L+++
Sbjct: 86 IEKMLQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFTVIHIGIGNIGNIPLVLIA 145
Query: 126 AVCDEDGNPFGKDSSRCRSLGLSYSSLSMALGGLYIWTHTYSLMKKKRDQMYHQPNSTQC 185
A+C + NPFG DS +C G +Y S +G + ++T+ + ++ P +
Sbjct: 146 ALCRDPTNPFG-DSDKCNEDGNAYISFGQWVGAIIVYTYVFKML---------APPPGES 195
Query: 186 LDDSDEEHHSKKFKANGEAAYADEEATLPVSAKLAQHNEENQMEAPLLSCESKVAKKCSW 245
D ++E+ KA+G+ E+ P S + + E PLLS E K S
Sbjct: 196 FDSAEEDIL--PIKASGDNV-VPEKGKYPTSTRTSTVPENE----PLLSSEGD--KNVS- 245
Query: 246 TTTNLKDTIHHVV---------EELMAPPTLSAILGFVFGLVPWLKSLVIGDGAPLRVIQ 296
T+L I +V ++L+ PP ++++ G+VP LK+ V+ D APL
Sbjct: 246 --TSLGSKIMGIVRSMVKFLKDKQLLQPPIIASVFAIAIGVVPVLKNFVLTDDAPLFFFT 303
Query: 297 DSIQLMGNGTIPCVTLILGGNLIKGLRK--SELKRTVIIAIVCIRYVILPLVGIAVVHGA 354
DS ++G IPC+ L +GGNL+ G + + L +AI+ R +++PL G+ ++
Sbjct: 304 DSCLILGEAMIPCILLAVGGNLVDGPGEGSNRLGVRTTVAIIFARLILVPLAGVGIIVLV 363
Query: 355 YWVGFLPH-DPLYRYVLMMQFALPPAMTIGNLS 386
+GF+P D ++++VL++Q ++P ++ G ++
Sbjct: 364 DKLGFIPKDDKMFKFVLLLQHSMPTSVLSGAVA 396
>Os05g0481900 Auxin Efflux Carrier family protein
Length = 437
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 206/391 (52%), Gaps = 23/391 (5%)
Query: 4 LALLLVASMPVVQVLLIGVVGAFLASGYSNILTSSALSDMNKVVFTVFTPSLMFASLART 63
L + A +P+ +V ++ +G +AS +L S +N +VF++ P L+FA L R+
Sbjct: 26 LGMFRYAVLPIAKVFVVCFMGFLMASKRVGVLKPSGRKLLNALVFSLLLPCLIFAQLGRS 85
Query: 64 VTFSDVISWWFMPINIGITFMAGGTLGWIACRILKPPQHFRGMIIAFCSAGNLGNLLLIV 123
+T ++ WWF+P NI + ++ +G I I++PP + I GN+GN+ L++
Sbjct: 86 ITIDKIMEWWFIPANIALGAVSASLVGLIVALIVRPPYPYFKFTITHIGIGNIGNIPLVL 145
Query: 124 VPAVCDEDGNPFGKDSSRCRSLGLSYSSLSMALGGLYIWTHTYSLMKKKRDQMYHQPNST 183
+ A+C + NPFG DS++C G +Y S +G + ++T+ + ++ P
Sbjct: 146 ISALCRDQLNPFG-DSNKCTQDGNAYLSFGQWVGAIIVYTYVFKML---------APPPG 195
Query: 184 QCLDDSDEEHHSKKFKANGEAAYADEEATLPVSAKLAQHNEENQMEAPLLSCE--SKVAK 241
Q D DEE KA + A P SA H EE + E V
Sbjct: 196 QTFDSCDEERDKLPIKAPNTMS---SVAKYPSSAHGNTHEEEPLLSIEEEEEEEGQDVHS 252
Query: 242 KCSWTTTNLKDTIHHVV-EELMAPPTLSAILGFVFGLVPWLKSLVIGDGAPLRVIQDSIQ 300
S +K + + ++L+ PP ++++L G+VP+LK+L++ D APL + DS
Sbjct: 253 LGSKIMIPIKGMVRFLQKKQLLQPPIIASVLAITLGVVPFLKNLILTDDAPLFFLTDSCL 312
Query: 301 LMGNGTIPCVTLILGGNLI----KGLRKSELKRTVIIAIVCIRYVILPLVGIAVVHGAYW 356
++G IPC+ L +GGNL+ +G R+ ++ TV AI+ R +++P+ GI +V A
Sbjct: 313 ILGEAMIPCILLAVGGNLVDGPGEGSRRLGVRTTV--AIIFARLILVPIAGIGIVSFADK 370
Query: 357 VGFLPH-DPLYRYVLMMQFALPPAMTIGNLS 386
+GF+P D ++++VL++Q ++P ++ G ++
Sbjct: 371 LGFIPKGDKMFKFVLLLQHSMPTSVLSGAVA 401
>Os08g0191000 Auxin Efflux Carrier family protein
Length = 455
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 200/404 (49%), Gaps = 36/404 (8%)
Query: 10 ASMPVVQVLLIGVVGAFLASGYSNILTSSALSDMNKVVFTVFTPSLMFASLARTVTFSDV 69
A MP++++L + V+G L++ + I+ + ++K+VF +F P L+F L ++VT ++
Sbjct: 23 AVMPLMKLLCLTVIGLVLSNPRTQIIPKATFKLLSKLVFALFLPCLIFVHLGQSVTIQNI 82
Query: 70 ISWWFMPINIGITFMAGGTLGWIACRILKPPQHFRGMIIAFCSAGNLGNLLLIVVPAVCD 129
+ WWF+P+N+ I+ G LG+I I +PP F + GN GNL + ++ +VC
Sbjct: 83 LDWWFIPVNVLISTAIGCILGYIVALICRPPPQFFRFTVIMTGFGNTGNLPIAIIGSVCH 142
Query: 130 EDGNPFGKDSSRCRSLGLSYSSLSMALGGLYIWTHTYSLMKK---------KRDQMYHQP 180
+PFG C G++Y S + + + ++T Y +M+ + +++ +P
Sbjct: 143 TTDHPFGPG---CHRKGVAYVSFAQWVAVILVYTLVYHMMEPPMQFYEIVGEGNEIVEEP 199
Query: 181 ----NSTQCL---------DDSDEEHHSKKFKANGEAAYA-DEEATLPVSAKLAQHNEEN 226
N ++ L D + EH F A + + + T P +
Sbjct: 200 AQISNYSRSLLHEAEWPGMADKETEHSKTPFIARVFMSISGSSQNTFPDIDFAEEGTSGA 259
Query: 227 QMEAPL-LSC--ESKVAKKCSWTTTNLKDTIHHVVEELMAPPTLSAILGFVFGLVPWLKS 283
+P L C E KV ++ K I HV++ PPT++++L V G+VP K
Sbjct: 260 GPSSPKSLRCLAEPKVVRRIRVVAE--KTPIQHVLQ----PPTIASLLAIVIGMVPLFKD 313
Query: 284 LVIGDGAPLRVIQDSIQLMGNGTIPCVTLILGGNLIKGLRKSELKRTVIIAIVCIRYVIL 343
V APL DS++++ +P V LILGG L +G + + L I I+ R +IL
Sbjct: 314 FVFVPDAPLSFFTDSLEILAQAVVPSVMLILGGMLAEGPKDNALGIRTITGIIVARLLIL 373
Query: 344 PLVGIAVVHGAYWVGFL-PHDPLYRYVLMMQFALPPAMTIGNLS 386
P +GI VV A + L D +YR+VL +Q++ P A+ +G ++
Sbjct: 374 PCIGIGVVLLADRLHLLVEEDHMYRFVLSLQYSTPSAILLGAIA 417
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.138 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,508,849
Number of extensions: 567069
Number of successful extensions: 1779
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1767
Number of HSP's successfully gapped: 7
Length of query: 387
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 284
Effective length of database: 11,657,759
Effective search space: 3310803556
Effective search space used: 3310803556
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 157 (65.1 bits)