Os05g0481900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Auxin Efflux Carrier family protein.
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Os05g0481900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Auxin Efflux Carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.01 | 0.515 | 6.27 | 0.0493 | 1.66 | 1.65 | 0.405 | -3.81 | 0.308 | 3.61 | 25.97 | 1219 | -- | -- |
| 123.51 | 0.518 | 6.15 | 0.951 | 1.64 | 1.34 | 0.275 | -- | 0.516 | 3.77 | 26.24 | 1144 | -- | -- |
| 120.39 | 0.511 | 6.27 | 0.0803 | 1.67 | 1.68 | -- | -3.85 | 0.345 | 3.67 | 26.31 | 1193 | -- | -- |
| 123.41 | 0.517 | 6.15 | 0.981 | 1.67 | 1.26 | -- | -- | 0.563 | 3.64 | 26.6 | 1171 | -- | -- |
| 265.22 | 0.758 | 6.3 | 0.0606 | -- | 2.07 | -- | -3.26 | 0.2 | -- | 24.68 | 1184 | -- | -- |
| 183.47 | 0.635 | 6.15 | 1.36 | 1.85 | -- | 0.575 | -- | 0.593 | 3.28 | -- | -- | -- | -- |
| 184.53 | 0.636 | 6.15 | 1.35 | 1.85 | -- | -- | -- | 0.59 | 3.29 | -- | -- | -- | -- |
| 269.86 | 0.765 | 6.2 | 0.884 | -- | 1.76 | -- | -- | 0.417 | -- | 24.65 | 1177 | -- | -- |
| 147 | 0.565 | 6.18 | -- | 1.7 | 1.52 | -- | -- | 0.416 | 3.81 | 26.07 | 1143 | -- | -- |
| 377.67 | 0.908 | 6.15 | 1.43 | -- | -- | -- | -- | 0.638 | -- | -- | -- | -- | -- |
| 232.63 | 0.713 | 6.18 | -- | 1.88 | -- | -- | -- | 0.439 | 3.29 | -- | -- | -- | -- |
| 289 | 0.792 | 6.23 | -- | -- | 1.96 | -- | -- | 0.277 | -- | 24.4 | 1184 | -- | -- |
| 431.56 | 0.97 | 6.18 | -- | -- | -- | -- | -- | 0.48 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.22 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 16 | 121.94 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 12 |
| 33 | 122.44 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 34 | 122.46 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 47 | 122.76 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 52 | 122.93 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 55 | 122.94 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 59 | 122.97 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 13 |
| 61 | 122.98 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 62 | 122.98 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 63 | 122.98 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 10 |
| 76 | 123.05 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 91 | 123.06 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 11 |
| 103 | 123.19 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 108 | 123.25 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 151 | 123.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 154 | 123.43 | temperature | 30 | 14400 | < th | dose independent | sin | 14 | NA |
| 160 | 123.50 | temperature | 30 | 14400 | > th | dose independent | sin | 14 | NA |
| 195 | 123.65 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 19 |
| 217 | 123.70 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 16 |
| 219 | 123.71 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 226 | 123.77 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 12 |
| 244 | 123.87 | wind | 9 | 43200 | < th | dose independent | rect. | 12 | 13 |
| 286 | 124.08 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 11 |
| 327 | 124.18 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 7 |
| 368 | 124.24 | temperature | 25 | 14400 | > th | dose dependent | rect. | 18 | 2 |
| 416 | 124.37 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 464 | 124.49 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 477 | 124.55 | wind | 9 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 511 | 124.63 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 526 | 124.70 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 535 | 124.73 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 555 | 124.79 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 566 | 124.82 | wind | 9 | 43200 | < th | dose independent | rect. | 14 | 9 |
| 578 | 124.86 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 612 | 124.95 | wind | 9 | 43200 | < th | dose independent | sin | 17 | NA |
| 618 | 124.96 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 626 | 124.99 | wind | 9 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 629 | 125.00 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 639 | 125.03 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 673 | 125.08 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 680 | 125.09 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 691 | 125.09 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 694 | 125.09 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 16 |
| 749 | 125.20 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 760 | 125.25 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 792 | 125.33 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 20 |
| 797 | 125.34 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 22 |
| 801 | 125.35 | radiation | 1 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 804 | 125.36 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 811 | 125.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 821 | 125.38 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 823 | 125.39 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 839 | 125.42 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 16 |
| 845 | 125.43 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 17 |
| 846 | 125.43 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 19 |
| 897 | 125.50 | temperature | 30 | 14400 | > th | dose dependent | sin | 13 | NA |
| 913 | 125.54 | wind | 9 | 43200 | > th | dose independent | sin | 17 | NA |
| 956 | 125.61 | wind | 7 | 43200 | > th | dose independent | sin | 21 | NA |
| 958 | 125.61 | radiation | 1 | 1440 | < th | dose dependent | sin | 23 | NA |
| 959 | 125.62 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 985 | 125.66 | wind | 7 | 43200 | > th | dose dependent | sin | 17 | NA |
| 994 | 125.68 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 995 | 125.68 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 22 |