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Os08g0191000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Auxin Efflux Carrier family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0193) R2 : 0.688
β1 : 0.894 (0.0709) R2dD : 0.113 R2D : 0.057
β2 : 1.43 (0.0497) R2dC : 0.564 R2C : 0.523
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.398 (0.0413) R2dN8 : 0.0853 R2N8 : 0.0219
σ : 0.364
deviance : 60.35
__
_____
C
peak time of C : 16.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.81 0.348 11.7 0.884 1.43 -0.638 -0.0923 -0.826 0.456 16.3 1.48 1462 -- --
55.31 0.346 11.7 0.884 1.41 -0.513 -0.0962 -- 0.468 16.4 2.12 1450 -- --
54.82 0.345 11.7 0.883 1.43 -0.642 -- -0.851 0.456 16.3 1.48 1465 -- --
55.29 0.346 11.7 0.917 1.42 -0.501 -- -- 0.46 16.4 1.95 1445 -- --
157.93 0.589 11.7 0.834 -- 0.292 -- -0.549 0.35 -- 1.506 21489 -- --
60.35 0.364 11.7 0.894 1.43 -- -0.0287 -- 0.399 16.4 -- -- -- --
60.35 0.364 11.7 0.894 1.43 -- -- -- 0.398 16.4 -- -- -- --
159.88 0.591 11.7 0.836 -- 0.287 -- -- 0.352 -- 1.506 21489 -- --
74.28 0.401 11.7 -- 1.5 -0.426 -- -- 0.423 16.5 9.97 5778 -- --
169.16 0.608 11.7 0.838 -- -- -- -- 0.361 -- -- -- -- --
81.4 0.422 11.7 -- 1.41 -- -- -- 0.299 16.5 -- -- -- --
174.79 0.618 11.7 -- -- 0.354 -- -- 0.293 -- 9.97 5778 -- --
187.68 0.639 11.7 -- -- -- -- -- 0.268 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.48 temperature 10.0 270 > th dose dependent rect. 2 9
3 41.11 radiation 1.0 270 < th dose independent rect. 21 17
11 41.63 radiation 1.0 270 < th dose dependent rect. 21 17
25 42.19 temperature 15.0 10 > th dose dependent rect. 5 7
48 43.01 temperature 15.0 270 > th dose independent rect. 2 9
53 43.30 precipitation 0.1 270 < th dose independent rect. 2 9
54 43.30 precipitation 0.1 270 < th dose dependent rect. 2 9
58 43.38 wind 9.0 270 < th dose independent rect. 16 18
60 43.42 humidity 50.0 270 > th dose independent rect. 16 18
62 43.49 precipitation 0.1 270 < th dose independent rect. 16 18
63 43.49 precipitation 0.1 270 < th dose dependent rect. 16 18
66 43.57 temperature 10.0 270 > th dose independent rect. 10 6
67 43.57 atmosphere 1015.0 270 < th dose independent rect. 10 6
68 43.57 temperature 10.0 270 > th dose independent rect. 16 18
74 43.68 precipitation 0.1 270 < th dose independent rect. 10 6
75 43.68 precipitation 0.1 270 < th dose dependent rect. 10 6
78 43.82 atmosphere 995.0 270 > th dose independent rect. 10 6
85 43.94 wind 9.0 270 < th dose independent rect. 10 6
91 44.04 radiation 30.0 270 < th dose independent rect. 15 7
93 44.08 wind 9.0 270 < th dose independent rect. 15 7
96 44.14 wind 1.0 270 > th dose independent rect. 10 6
98 44.16 atmosphere 995.0 270 > th dose independent rect. 16 18
99 44.17 temperature 10.0 270 > th dose independent rect. 15 7
100 44.17 temperature 10.0 270 > th dose independent rect. 22 17
101 44.19 wind 7.0 270 < th dose independent rect. 2 9
104 44.29 atmosphere 995.0 270 > th dose independent rect. 22 17
107 44.35 humidity 50.0 270 > th dose independent rect. 2 9
119 44.54 atmosphere 995.0 270 > th dose independent rect. 2 9
120 44.54 atmosphere 1015.0 270 < th dose independent rect. 2 9
121 44.54 temperature 10.0 270 > th dose independent rect. 11 15
125 44.57 humidity 50.0 270 > th dose independent rect. 15 7
128 44.59 wind 1.0 270 > th dose independent rect. 15 7
129 44.62 wind 9.0 270 < th dose independent rect. 22 17
142 44.81 atmosphere 1015.0 270 < th dose independent rect. 22 17
151 44.88 precipitation 0.1 270 < th dose independent rect. 11 15
153 44.88 precipitation 0.1 270 < th dose dependent rect. 11 15
154 44.89 humidity 50.0 270 > th dose independent rect. 16 5
156 44.90 precipitation 0.1 270 < th dose independent rect. 15 7
157 44.90 precipitation 0.1 270 < th dose dependent rect. 15 7
159 44.92 radiation 20.0 270 < th dose independent rect. 16 5
182 45.07 radiation 40.0 270 < th dose dependent rect. 16 5
190 45.14 wind 9.0 270 < th dose independent rect. 11 15
202 45.21 atmosphere 995.0 270 > th dose independent rect. 15 7
205 45.29 radiation 1.0 270 > th dose independent rect. 10 6
208 45.31 precipitation 0.1 270 < th dose independent rect. 22 17
209 45.31 precipitation 0.1 270 < th dose dependent rect. 22 17
214 45.38 atmosphere 1015.0 270 < th dose independent rect. 15 7
215 45.38 radiation 40.0 270 < th dose dependent rect. 15 7
221 45.46 humidity 50.0 270 > th dose independent rect. 10 6
223 45.46 atmosphere 995.0 270 > th dose dependent rect. 10 6
247 45.57 humidity 50.0 270 > th dose independent rect. 22 17
248 45.58 atmosphere 1015.0 270 < th dose independent rect. 16 5
249 45.59 radiation 40.0 270 < th dose independent rect. 16 17
259 45.65 atmosphere 995.0 270 > th dose dependent rect. 11 4
267 45.69 temperature 30.0 270 < th dose independent rect. 16 17
270 45.72 temperature 30.0 270 < th dose independent rect. 16 5
279 45.75 temperature 20.0 10 > th dose dependent rect. 7 5
284 45.81 wind 1.0 270 > th dose independent rect. 22 18
300 45.93 radiation 1.0 270 > th dose independent rect. 11 4
321 46.08 temperature 20.0 270 > th dose independent rect. 4 6
342 46.20 temperature 15.0 270 > th dose independent rect. 5 16
360 46.30 humidity 50.0 90 > th dose dependent rect. 23 17
420 46.60 wind 9.0 270 < th dose dependent rect. 3 8
423 46.61 atmosphere 995.0 270 > th dose dependent rect. 16 5
480 46.81 radiation 30.0 90 < th dose dependent rect. 23 17
521 46.99 humidity 60.0 10 > th dose dependent rect. 23 17
545 47.07 temperature 20.0 270 > th dose dependent rect. 7 1
549 47.08 wind 9.0 270 < th dose dependent rect. 16 5
564 47.14 atmosphere 1015.0 270 < th dose independent rect. 16 18
595 47.23 radiation 1.0 270 > th dose independent sin 10 NA
633 47.37 radiation 30.0 10 < th dose dependent rect. 23 17
637 47.38 radiation 1.0 270 > th dose independent rect. 17 17
643 47.40 humidity 50.0 90 > th dose dependent rect. 17 6
645 47.41 atmosphere 995.0 270 > th dose independent rect. 11 15
662 47.46 radiation 1.0 270 < th dose independent sin 10 NA
674 47.50 radiation 20.0 90 < th dose dependent rect. 23 9
696 47.59 radiation 1.0 90 > th dose independent rect. 11 8
737 47.66 temperature 10.0 270 > th dose independent rect. 21 8
738 47.66 temperature 30.0 270 < th dose independent rect. 21 8
739 47.66 humidity 50.0 270 > th dose independent rect. 21 8
742 47.66 atmosphere 995.0 270 > th dose independent rect. 21 8
743 47.66 radiation 20.0 270 < th dose independent rect. 21 8
748 47.66 radiation 1.0 270 < th dose dependent sin 10 NA
756 47.67 wind 9.0 270 < th dose independent rect. 5 16
778 47.70 wind 7.0 10 < th dose independent rect. 18 18
780 47.71 wind 9.0 270 < th dose independent rect. 21 8
783 47.72 radiation 30.0 10 < th dose dependent rect. 23 9
817 47.81 temperature 25.0 90 > th dose dependent rect. 20 15
820 47.82 atmosphere 1015.0 270 < th dose independent rect. 5 16
828 47.85 humidity 80.0 10 > th dose independent rect. 23 17
830 47.86 humidity 50.0 270 > th dose dependent rect. 11 3
922 48.10 precipitation 0.1 270 < th dose independent rect. 5 16
923 48.10 precipitation 0.1 270 < th dose dependent rect. 5 16
924 48.10 temperature 10.0 90 > th dose dependent rect. 18 17
926 48.11 radiation 20.0 90 < th dose dependent rect. 23 12
955 48.18 temperature 10.0 270 > th dose dependent rect. 16 18
963 48.21 humidity 90.0 270 < th dose independent rect. 11 4
985 48.26 humidity 50.0 270 > th dose dependent rect. 10 5