BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0191000 Os08g0191000|AK065037
(455 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0191000 Auxin Efflux Carrier family protein 894 0.0
Os01g0818000 Auxin Efflux Carrier family protein 306 2e-83
Os05g0481900 Auxin Efflux Carrier family protein 289 2e-78
Os09g0554300 Auxin Efflux Carrier family protein 190 1e-48
Os09g0555100 Auxin Efflux Carrier family protein 160 2e-39
Os09g0491740 Auxin Efflux Carrier family protein 156 3e-38
>Os08g0191000 Auxin Efflux Carrier family protein
Length = 455
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/455 (97%), Positives = 443/455 (97%)
Query: 1 MDWLSANLQVNPQVTVHGDWVSAVMPLMKLLCLTVIGLVLSNPRTQIIPKATFKLLSKLV 60
MDWLSANLQVNPQVTVHGDWVSAVMPLMKLLCLTVIGLVLSNPRTQIIPKATFKLLSKLV
Sbjct: 1 MDWLSANLQVNPQVTVHGDWVSAVMPLMKLLCLTVIGLVLSNPRTQIIPKATFKLLSKLV 60
Query: 61 FALFLPCLIFVHLGQSVTIQNILDWWFIPVNVLISTAIGCILGYIVALICRPPPQFFRFT 120
FALFLPCLIFVHLGQSVTIQNILDWWFIPVNVLISTAIGCILGYIVALICRPPPQFFRFT
Sbjct: 61 FALFLPCLIFVHLGQSVTIQNILDWWFIPVNVLISTAIGCILGYIVALICRPPPQFFRFT 120
Query: 121 VIMTGFGNTGNLPIAIIGSVCHTTDHPFGPGCHRKGVAYVSFAQWVAVILVYTLVYHMME 180
VIMTGFGNTGNLPIAIIGSVCHTTDHPFGPGCHRKGVAYVSFAQWVAVILVYTLVYHMME
Sbjct: 121 VIMTGFGNTGNLPIAIIGSVCHTTDHPFGPGCHRKGVAYVSFAQWVAVILVYTLVYHMME 180
Query: 181 PPMQFYXXXXXXXXXXXXPAQISNYSRSLLHEAEWPGMADKETEHSKTPFIARVFMSISG 240
PPMQFY PAQISNYSRSLLHEAEWPGMADKETEHSKTPFIARVFMSISG
Sbjct: 181 PPMQFYEIVGEGNEIVEEPAQISNYSRSLLHEAEWPGMADKETEHSKTPFIARVFMSISG 240
Query: 241 SSQNTFPDIDFAEEGTSGAGPSSPKSLRCLAEPKVVRRIRVVAEKTPIQHVLQPPTIASL 300
SSQNTFPDIDFAEEGTSGAGPSSPKSLRCLAEPKVVRRIRVVAEKTPIQHVLQPPTIASL
Sbjct: 241 SSQNTFPDIDFAEEGTSGAGPSSPKSLRCLAEPKVVRRIRVVAEKTPIQHVLQPPTIASL 300
Query: 301 LAIVIGMVPLFKDFVFVPDAPLSFFTDSLEILAQAVVPSVMLILGGMLAEGPKDNALGIR 360
LAIVIGMVPLFKDFVFVPDAPLSFFTDSLEILAQAVVPSVMLILGGMLAEGPKDNALGIR
Sbjct: 301 LAIVIGMVPLFKDFVFVPDAPLSFFTDSLEILAQAVVPSVMLILGGMLAEGPKDNALGIR 360
Query: 361 TITGIIVARLLILPCIGIGVVLLADRLHLLVEEDHMYRFVLSLQYSTPSAILLGAIASLR 420
TITGIIVARLLILPCIGIGVVLLADRLHLLVEEDHMYRFVLSLQYSTPSAILLGAIASLR
Sbjct: 361 TITGIIVARLLILPCIGIGVVLLADRLHLLVEEDHMYRFVLSLQYSTPSAILLGAIASLR 420
Query: 421 GYAVKEASALLFWQHICAVLSLSIYLIVYFRLLTI 455
GYAVKEASALLFWQHICAVLSLSIYLIVYFRLLTI
Sbjct: 421 GYAVKEASALLFWQHICAVLSLSIYLIVYFRLLTI 455
>Os01g0818000 Auxin Efflux Carrier family protein
Length = 432
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 263/440 (59%), Gaps = 47/440 (10%)
Query: 23 AVMPLMKLLCLTVIGLVLSNPRTQIIPKATFKLLSKLVFALFLPCLIFVHLGQSVTIQNI 82
AV+P+ K+ + +G ++++ I+ KLL+ LVF+L LPCLIF LG+++TI+ +
Sbjct: 30 AVLPIAKVFTVCFMGFLMASKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGRAITIEKM 89
Query: 83 LDWWFIPVNVLISTAIGCILGYIVALICRPPPQFFRFTVIMTGFGNTGNLPIAIIGSVCH 142
L WW+IPVN+++ G ++G++VA I RPP +F+FTVI G GN GN+P+ +I ++C
Sbjct: 90 LQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFTVIHIGIGNIGNIPLVLIAALCR 149
Query: 143 TTDHPFGPG--CHRKGVAYVSFAQWVAVILVYTLVYHMMEPPMQFYXXXXXXXXXXXXPA 200
+PFG C+ G AY+SF QWV I+VYT V+ M+ PP P
Sbjct: 150 DPTNPFGDSDKCNEDGNAYISFGQWVGAIIVYTYVFKMLAPP----------------PG 193
Query: 201 QISNYSRSLLHEAEWPGMADKET---EHSKTPFIARVFMSISGSSQNTFPDID--FAEEG 255
+ S E P A + E K P + + +T P+ + + EG
Sbjct: 194 E----SFDSAEEDILPIKASGDNVVPEKGKYP---------TSTRTSTVPENEPLLSSEG 240
Query: 256 TSGAGPSSPKSLRCLAEPKVVRRIRVVAEKTPIQHVLQPPTIASLLAIVIGMVPLFKDFV 315
K++ K++ +R + + + +LQPP IAS+ AI IG+VP+ K+FV
Sbjct: 241 D--------KNVSTSLGSKIMGIVRSMVKFLKDKQLLQPPIIASVFAIAIGVVPVLKNFV 292
Query: 316 FVPDAPLSFFTDSLEILAQAVVPSVMLILGGMLAEGPKD--NALGIRTITGIIVARLLIL 373
DAPL FFTDS IL +A++P ++L +GG L +GP + N LG+RT II ARL+++
Sbjct: 293 LTDDAPLFFFTDSCLILGEAMIPCILLAVGGNLVDGPGEGSNRLGVRTTVAIIFARLILV 352
Query: 374 PCIGIGVVLLADRLHLLVEEDHMYRFVLSLQYSTPSAILLGAIASLRGYAVKEASALLFW 433
P G+G+++L D+L + ++D M++FVL LQ+S P+++L GA+A+LRG KE++A+LFW
Sbjct: 353 PLAGVGIIVLVDKLGFIPKDDKMFKFVLLLQHSMPTSVLSGAVANLRGCG-KESAAILFW 411
Query: 434 QHICAVLSLSIYLIVYFRLL 453
HI AV S++ ++I+Y LL
Sbjct: 412 VHIFAVFSMAGWIILYLSLL 431
>Os05g0481900 Auxin Efflux Carrier family protein
Length = 437
Score = 289 bits (740), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 252/443 (56%), Gaps = 34/443 (7%)
Query: 15 TVHGDWVSAVMPLMKLLCLTVIGLVLSNPRTQIIPKATFKLLSKLVFALFLPCLIFVHLG 74
+V G + AV+P+ K+ + +G ++++ R ++ + KLL+ LVF+L LPCLIF LG
Sbjct: 24 SVLGMFRYAVLPIAKVFVVCFMGFLMASKRVGVLKPSGRKLLNALVFSLLLPCLIFAQLG 83
Query: 75 QSVTIQNILDWWFIPVNVLISTAIGCILGYIVALICRPPPQFFRFTVIMTGFGNTGNLPI 134
+S+TI I++WWFIP N+ + ++G IVALI RPP +F+FT+ G GN GN+P+
Sbjct: 84 RSITIDKIMEWWFIPANIALGAVSASLVGLIVALIVRPPYPYFKFTITHIGIGNIGNIPL 143
Query: 135 AIIGSVCHTTDHPFGPG--CHRKGVAYVSFAQWVAVILVYTLVYHMMEPPMQFYXXXXXX 192
+I ++C +PFG C + G AY+SF QWV I+VYT V+ M+ PP
Sbjct: 144 VLISALCRDQLNPFGDSNKCTQDGNAYLSFGQWVGAIIVYTYVFKMLAPPPG-QTFDSCD 202
Query: 193 XXXXXXPAQISNYSRSLLHEAEWPGMADKETEHSKTPFIARVFMSISGSSQNTFPDIDFA 252
P + N S+ A++P A T + G ++
Sbjct: 203 EERDKLPIKAPNTMSSV---AKYPSSAHGNTHEEEPLLSIEEEEEEEGQDVHSLGS---- 255
Query: 253 EEGTSGAGPSSPKSLRCLAEPKVVRRIRVVAEKTPIQHVLQPPTIASLLAIVIGMVPLFK 312
K++ I+ + + +LQPP IAS+LAI +G+VP K
Sbjct: 256 ---------------------KIMIPIKGMVRFLQKKQLLQPPIIASVLAITLGVVPFLK 294
Query: 313 DFVFVPDAPLSFFTDSLEILAQAVVPSVMLILGGMLAEGPKDNA--LGIRTITGIIVARL 370
+ + DAPL F TDS IL +A++P ++L +GG L +GP + + LG+RT II ARL
Sbjct: 295 NLILTDDAPLFFLTDSCLILGEAMIPCILLAVGGNLVDGPGEGSRRLGVRTTVAIIFARL 354
Query: 371 LILPCIGIGVVLLADRLHLLVEEDHMYRFVLSLQYSTPSAILLGAIASLRGYAVKEASAL 430
+++P GIG+V AD+L + + D M++FVL LQ+S P+++L GA+A+LRG KE++A+
Sbjct: 355 ILVPIAGIGIVSFADKLGFIPKGDKMFKFVLLLQHSMPTSVLSGAVANLRGCG-KESAAI 413
Query: 431 LFWQHICAVLSLSIYLIVYFRLL 453
LFW HI AV S++ ++I+Y +L
Sbjct: 414 LFWVHIFAVFSMAGWIILYLTML 436
>Os09g0554300 Auxin Efflux Carrier family protein
Length = 428
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 224/447 (50%), Gaps = 43/447 (9%)
Query: 23 AVMPLMKLLCLTVIGLVLSNPRTQIIPKATFKLLSKLVFALFLPCLIFVHLGQSVTIQNI 82
A MP++++L + VIG L++ ++I+ + + ++K+VF +F P L+F L ++VT+ ++
Sbjct: 10 ASMPIVQVLLIGVIGAFLASGYSKILTSSALRDMNKVVFTVFTPSLMFASLAKTVTLSDV 69
Query: 83 LDWWFIPVNVLISTAIGCILGYIVALICRPPPQFFRFTVIMTGFGNTGNLPIAIIGSVCH 142
+ WWF+PVN+ I+ +G LG+I I +PP F + GN GNL + I+ +VC
Sbjct: 70 ISWWFMPVNIGITFIVGGTLGWIACKILKPPQHFRGMIIAFCSAGNLGNLLLIIVPAVCD 129
Query: 143 TTDHPFGPG---CHRKGVAYVSFAQWVAVILVYTLVYHMMEPPMQFYXXXXXXXXXXXXP 199
+PFG C +G++Y S + + + ++T Y +M+ + Y
Sbjct: 130 EDGNPFGKDRSLCRSRGLSYSSLSMALGGLFIWTHTYSLMQKAGKMYHKMQ--------- 180
Query: 200 AQISNYSRSLLHEAEWPGMADKETEHSKTPFIARVFMSISGSSQNTFPDIDFAEEGTSGA 259
S+S+ + P AD + EH A+ + + + D + A ++
Sbjct: 181 ------SKSI----QCP--ADSDEEHHP----AQGHDQVKLDGETAYADEEAALLVSAKL 224
Query: 260 GPSSPKSLRCLAEPKVVRRIRVVAEKTP------------IQHVLQPPTIASLLAIVIGM 307
P + + E ++ R +A K ++ ++ PPT++++L V+G+
Sbjct: 225 APEHNEENQ--MEAPLLTCEREIANKGGFWTNLKETVHQVVEELMAPPTVSAILGFVVGL 282
Query: 308 VPLFKDFVFVPDAPLSFFTDSLEILAQAVVPSVMLILGGMLAEGPKDNALGIRTITGIIV 367
VP K V APL +SL+++ +P + LILGG L +G + + L I I+
Sbjct: 283 VPWLKSLVIGNGAPLRVIQESLQLMGNGTIPCITLILGGNLTQGLRKSVLKRTVIITIVC 342
Query: 368 ARLLILPCIGIGVVLLADRLHLLVEEDHMYRFVLSLQYSTPSAILLGAIASLRGYAVKEA 427
R +I P IG+ VV A + L D +YR+VL +Q++ P A+ +G +A L +E
Sbjct: 343 IRYVIQPLIGMAVVHAAYGVGFL-PHDPLYRYVLMMQFALPPAMNIGTMAQLFDVGQEEC 401
Query: 428 SALLFWQHICAVLSLSIYLIVYFRLLT 454
S + W ++ A ++L+ + ++ +L+
Sbjct: 402 SVIFLWTYLIAAIALTTWSTIFMSILS 428
>Os09g0555100 Auxin Efflux Carrier family protein
Length = 387
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 196/405 (48%), Gaps = 38/405 (9%)
Query: 23 AVMPLMKLLCLTVIGLVLSNPRTQIIPKATFKLLSKLVFALFLPCLIFVHLGQSVTIQNI 82
A MP++++L + V+G L++ + I+ + ++K+VF +F P L+F L ++VT ++
Sbjct: 10 ASMPVVQVLLIGVVGAFLASGYSNILTSSALSDMNKVVFTVFTPSLMFASLARTVTFSDV 69
Query: 83 LDWWFIPVNVLISTAIGCILGYIVALICRPPPQFFRFTVIMTGFGNTGNLPIAIIGSVCH 142
+ WWF+P+N+ I+ G LG+I I +PP F + GN GNL + ++ +VC
Sbjct: 70 ISWWFMPINIGITFMAGGTLGWIACRILKPPQHFRGMIIAFCSAGNLGNLLLIVVPAVCD 129
Query: 143 TTDHPFGPG---CHRKGVAYVSFAQWVAVILVYTLVYHMMEPPM-QFYXXXXXXXXXXXX 198
+PFG C G++Y S + + + ++T Y +M+ Q Y
Sbjct: 130 EDGNPFGKDSSRCRSLGLSYSSLSMALGGLYIWTHTYSLMKKKRDQMY------------ 177
Query: 199 PAQISNYSRSLLHEAEWPGMADKETEHSKTPFIARVFMSISGSSQNTFPDIDFAEEGTSG 258
N ++ L D + EH F A + + + T P +
Sbjct: 178 --HQPNSTQCL---------DDSDEEHHSKKFKANGEAAYA-DEEATLPVSAKLAQHNEE 225
Query: 259 AGPSSPKSLRCLAEPKVVRRIRVVAE--KTPIQHVLQ----PPTIASLLAIVIGMVPLFK 312
+P L C E KV ++ K I HV++ PPT++++L V G+VP K
Sbjct: 226 NQMEAPL-LSC--ESKVAKKCSWTTTNLKDTIHHVVEELMAPPTLSAILGFVFGLVPWLK 282
Query: 313 DFVFVPDAPLSFFTDSLEILAQAVVPSVMLILGGMLAEGPKDNALGIRTITGIIVARLLI 372
V APL DS++++ +P V LILGG L +G + + L I I+ R +I
Sbjct: 283 SLVIGDGAPLRVIQDSIQLMGNGTIPCVTLILGGNLIKGLRKSELKRTVIIAIVCIRYVI 342
Query: 373 LPCIGIGVVLLADRLHLLVEEDHMYRFVLSLQYSTPSAILLGAIA 417
LP +GI VV A + L D +YR+VL +Q++ P A+ +G ++
Sbjct: 343 LPLVGIAVVHGAYWVGFL-PHDPLYRYVLMMQFALPPAMTIGNLS 386
>Os09g0491740 Auxin Efflux Carrier family protein
Length = 379
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 202/400 (50%), Gaps = 38/400 (9%)
Query: 20 WVSAVMPLMKLLCLTVIGLVLSNPRTQIIPKATFKLLSKLVFALFLPCLIFVHLGQSVTI 79
+++A +P++ +L +T +G L+ I+ K K L+ +VF +F P L+ +L Q++T+
Sbjct: 7 FITACVPVLNMLLVTGVGSFLATDFVGILNKDARKYLNNIVFYVFNPSLVATYLAQTITL 66
Query: 80 QNILDWWFIPVNVLISTAIGCILGYIVALICRPPPQFFRFTVIMTGFGNTGNLPIAIIGS 139
+ + WF+PVN+L++ G ILG+IV + R P + + GN GN+ + II +
Sbjct: 67 EGLAKLWFMPVNILLACTFGLILGWIVVHVTRAPARLRGLILGCCSAGNWGNIFLIIIPA 126
Query: 140 VCHTTDHPFGPG--CHRKGVAYVSFAQWVAVILVYTLVYHMMEPPMQFYXXXXXXXXXXX 197
+C PFG CH G+AY S + + + ++T+ Y++M +
Sbjct: 127 LCKEKGSPFGAPDVCHTYGLAYSSLSMALGAVFLWTVAYNIMRATSK----VADEGNART 182
Query: 198 XPAQISNYSRSLLHEAEWPGMADKETEHSKTPFIARVFMSI-SGSSQNTFPDIDFAEEGT 256
++SN S G A +E +SI + ++Q T P I +
Sbjct: 183 NDTKVSNSGSS-------TGTASEEN------------LSIPNDNNQCTLPLI------S 217
Query: 257 SGAGPSSPKSLRCLAEPKVVRRIRVVAEKTPIQHVLQPPTIASLLAIVIGMVPLFKDFVF 316
+ + PSS K+ L+E + R + + + + P TIA ++ +IG PL ++ +
Sbjct: 218 NSSVPSS-KTKVTLSE-RAKRFVSSMFGAIDFKKIFAPSTIAVIIGFIIGGTPLIRNAII 275
Query: 317 VPDAPLSFFTDSLEILAQAVVPSVMLILGGMLAEGPKDNA-LGIRTITGIIVARLLILPC 375
+APL +S +++ +PSV LI+GG L G + A + I +IV R ++LP
Sbjct: 276 GENAPLRVIHESADLIGGGAIPSVTLIMGGNLLNGLRGEASVQPSVIASVIVVRYILLPS 335
Query: 376 IGIGVVLLADRLHL-LVEEDHMYRFVLSLQYSTPSAILLG 414
+G +L+ +HL L+ D +Y+F+L LQY+ P A+ +G
Sbjct: 336 --LGTLLVKSAVHLGLIHPDPLYQFILLLQYAVPPAMNIG 373
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.142 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,149,786
Number of extensions: 612610
Number of successful extensions: 1532
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1521
Number of HSP's successfully gapped: 11
Length of query: 455
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 351
Effective length of database: 11,605,545
Effective search space: 4073546295
Effective search space used: 4073546295
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 158 (65.5 bits)