Os09g0554300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Auxin Efflux Carrier family protein.
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Os09g0554300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Auxin Efflux Carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 496.86 | 1.05 | 7.83 | -4.14 | 5.88 | -3.21 | 3.52 | -3.27 | -0.621 | 3.9 | 67.27 | 1799 | 10.1 | -- |
| 507.73 | 1.05 | 7.83 | -4.5 | 5.88 | -3.29 | 2.51 | -- | -0.727 | 3.94 | 67.98 | 1915 | 11.4 | -- |
| 524.49 | 1.07 | 7.84 | -4.38 | 5.75 | -3.12 | -- | -1.32 | -0.701 | 3.88 | 67.96 | 1862 | 11.6 | -- |
| 526.77 | 1.07 | 7.84 | -4.56 | 5.85 | -3.24 | -- | -- | -0.741 | 3.89 | 68 | 1889 | 11.5 | -- |
| 1081.8 | 1.53 | 8.14 | -4.37 | -- | -4.69 | -- | -5.63 | -2.02 | -- | -13.32 | 2198 | 19.6 | -- |
| 686.66 | 1.23 | 7.73 | -4.78 | 5.17 | -- | 3.27 | -- | -0.341 | 4.33 | -- | -- | -- | -- |
| 715.48 | 1.25 | 7.75 | -4.81 | 5.19 | -- | -- | -- | -0.359 | 4.26 | -- | -- | -- | -- |
| 587.76 | 1.13 | 7.82 | -5.07 | -- | -7.16 | -- | -- | -0.445 | -- | -102.1 | 1853 | 17 | -- |
| 1034.95 | 1.5 | 7.77 | -- | 5.81 | -4.1 | -- | -- | -0.459 | 4.12 | 80.3 | 1988 | 11.2 | -- |
| 2167.01 | 2.18 | 7.78 | -4.6 | -- | -- | -- | -- | -0.221 | -- | -- | -- | -- | -- |
| 1325.74 | 1.7 | 7.63 | -- | 5.09 | -- | -- | -- | 0.177 | 4.28 | -- | -- | -- | -- |
| 1250.93 | 1.65 | 7.7 | -- | -- | -6.59 | -- | -- | 0.147 | -- | -148.8 | 1847 | 16.9 | -- |
| 2726.35 | 2.44 | 7.66 | -- | -- | -- | -- | -- | 0.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 505.84 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 7 | 512.91 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 22 | 517.99 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 25 | 519.58 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 28 | 520.46 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 30 | 520.56 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 7 |
| 31 | 520.91 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 22 |
| 36 | 521.34 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 17 |
| 42 | 522.02 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 21 |
| 49 | 522.33 | humidity | 60 | 1440 | > th | dose dependent | rect. | 10 | 21 |
| 65 | 522.87 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 10 |
| 76 | 523.13 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 77 | 523.13 | humidity | 70 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 81 | 523.21 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 17 |
| 92 | 523.46 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 101 | 523.60 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 22 |
| 110 | 523.80 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 22 |
| 129 | 524.26 | humidity | 60 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 139 | 524.41 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 175 | 524.71 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 189 | 525.04 | humidity | 70 | 1440 | > th | dose dependent | no | NA | NA |
| 190 | 525.05 | humidity | 80 | 720 | > th | dose independent | rect. | 18 | 5 |
| 194 | 525.07 | humidity | 80 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 203 | 525.30 | humidity | 70 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 231 | 525.91 | humidity | 70 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 250 | 526.26 | humidity | 60 | 1440 | > th | dose dependent | sin | 15 | NA |
| 252 | 526.27 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 21 |
| 254 | 526.32 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 269 | 526.54 | humidity | 60 | 1440 | > th | dose dependent | rect. | 13 | 15 |
| 277 | 526.72 | humidity | 80 | 720 | > th | dose independent | rect. | 16 | 8 |
| 347 | 527.78 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 17 |
| 358 | 527.87 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 370 | 528.04 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 396 | 528.32 | humidity | 70 | 1440 | > th | dose dependent | sin | 18 | NA |
| 420 | 528.62 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 456 | 529.00 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 521 | 529.66 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 563 | 530.23 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 19 |
| 571 | 530.33 | humidity | 80 | 1440 | > th | dose independent | sin | 20 | NA |
| 595 | 530.68 | humidity | 90 | 1440 | < th | dose dependent | sin | 13 | NA |
| 733 | 532.55 | humidity | 80 | 1440 | < th | dose independent | sin | 20 | NA |
| 807 | 533.50 | humidity | 90 | 720 | < th | dose independent | rect. | 16 | 8 |
| 929 | 535.35 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 941 | 535.50 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 13 |
| 943 | 535.53 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 19 |
| 972 | 535.91 | wind | 3 | 43200 | < th | dose dependent | rect. | 2 | 4 |