BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0554300 Os09g0554300|AK070682
(428 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0554300 Auxin Efflux Carrier family protein 877 0.0
Os09g0555100 Auxin Efflux Carrier family protein 622 e-178
Os09g0491740 Auxin Efflux Carrier family protein 281 9e-76
Os01g0818000 Auxin Efflux Carrier family protein 194 1e-49
Os08g0191000 Auxin Efflux Carrier family protein 191 9e-49
Os05g0481900 Auxin Efflux Carrier family protein 191 1e-48
>Os09g0554300 Auxin Efflux Carrier family protein
Length = 428
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/428 (100%), Positives = 428/428 (100%)
Query: 1 MGFLSLLLVASMPIVQVLLIGVIGAFLASGYSKILTSSALRDMNKVVFTVFTPSLMFASL 60
MGFLSLLLVASMPIVQVLLIGVIGAFLASGYSKILTSSALRDMNKVVFTVFTPSLMFASL
Sbjct: 1 MGFLSLLLVASMPIVQVLLIGVIGAFLASGYSKILTSSALRDMNKVVFTVFTPSLMFASL 60
Query: 61 AKTVTLSDVISWWFMPVNIGITFIVGGTLGWIACKILKPPQHFRGMIIAFCSAGNLGNLL 120
AKTVTLSDVISWWFMPVNIGITFIVGGTLGWIACKILKPPQHFRGMIIAFCSAGNLGNLL
Sbjct: 61 AKTVTLSDVISWWFMPVNIGITFIVGGTLGWIACKILKPPQHFRGMIIAFCSAGNLGNLL 120
Query: 121 LIIVPAVCDEDGNPFGKDRSLCRSRGLSYSSLSMALGGLFIWTHTYSLMQKAGKMYHKMQ 180
LIIVPAVCDEDGNPFGKDRSLCRSRGLSYSSLSMALGGLFIWTHTYSLMQKAGKMYHKMQ
Sbjct: 121 LIIVPAVCDEDGNPFGKDRSLCRSRGLSYSSLSMALGGLFIWTHTYSLMQKAGKMYHKMQ 180
Query: 181 SKSIQCPADSDEEHHPAQGHDQVKLDGETAYADEEAALLVSAKLAPEHNEENQMEAPLLT 240
SKSIQCPADSDEEHHPAQGHDQVKLDGETAYADEEAALLVSAKLAPEHNEENQMEAPLLT
Sbjct: 181 SKSIQCPADSDEEHHPAQGHDQVKLDGETAYADEEAALLVSAKLAPEHNEENQMEAPLLT 240
Query: 241 CEREIANKGGFWTNLKETVHQVVEELMAPPTVSAILGFVVGLVPWLKSLVIGNGAPLRVI 300
CEREIANKGGFWTNLKETVHQVVEELMAPPTVSAILGFVVGLVPWLKSLVIGNGAPLRVI
Sbjct: 241 CEREIANKGGFWTNLKETVHQVVEELMAPPTVSAILGFVVGLVPWLKSLVIGNGAPLRVI 300
Query: 301 QESLQLMGNGTIPCITLILGGNLTQGLRKSVLKRTVIITIVCIRYVIQPLIGMAVVHAAY 360
QESLQLMGNGTIPCITLILGGNLTQGLRKSVLKRTVIITIVCIRYVIQPLIGMAVVHAAY
Sbjct: 301 QESLQLMGNGTIPCITLILGGNLTQGLRKSVLKRTVIITIVCIRYVIQPLIGMAVVHAAY 360
Query: 361 GVGFLPHDPLYRYVLMMQFALPPAMNIGTMAQLFDVGQEECSVIFLWTYLIAAIALTTWS 420
GVGFLPHDPLYRYVLMMQFALPPAMNIGTMAQLFDVGQEECSVIFLWTYLIAAIALTTWS
Sbjct: 361 GVGFLPHDPLYRYVLMMQFALPPAMNIGTMAQLFDVGQEECSVIFLWTYLIAAIALTTWS 420
Query: 421 TIFMSILS 428
TIFMSILS
Sbjct: 421 TIFMSILS 428
>Os09g0555100 Auxin Efflux Carrier family protein
Length = 387
Score = 622 bits (1603), Expect = e-178, Method: Compositional matrix adjust.
Identities = 318/393 (80%), Positives = 348/393 (88%), Gaps = 9/393 (2%)
Query: 1 MGFLSLLLVASMPIVQVLLIGVIGAFLASGYSKILTSSALRDMNKVVFTVFTPSLMFASL 60
MGFL+LLLVASMP+VQVLLIGV+GAFLASGYS ILTSSAL DMNKVVFTVFTPSLMFASL
Sbjct: 1 MGFLALLLVASMPVVQVLLIGVVGAFLASGYSNILTSSALSDMNKVVFTVFTPSLMFASL 60
Query: 61 AKTVTLSDVISWWFMPVNIGITFIVGGTLGWIACKILKPPQHFRGMIIAFCSAGNLGNLL 120
A+TVT SDVISWWFMP+NIGITF+ GGTLGWIAC+ILKPPQHFRGMIIAFCSAGNLGNLL
Sbjct: 61 ARTVTFSDVISWWFMPINIGITFMAGGTLGWIACRILKPPQHFRGMIIAFCSAGNLGNLL 120
Query: 121 LIIVPAVCDEDGNPFGKDRSLCRSRGLSYSSLSMALGGLFIWTHTYSLMQKA-GKMYHKM 179
LI+VPAVCDEDGNPFGKD S CRS GLSYSSLSMALGGL+IWTHTYSLM+K +MYH
Sbjct: 121 LIVVPAVCDEDGNPFGKDSSRCRSLGLSYSSLSMALGGLYIWTHTYSLMKKKRDQMYH-- 178
Query: 180 QSKSIQCPADSDEEHHPAQGHDQVKLDGETAYADEEAALLVSAKLAPEHNEENQMEAPLL 239
Q S QC DSDEEHH + K +GE AYADEEA L VSAKLA +HNEENQMEAPLL
Sbjct: 179 QPNSTQCLDDSDEEHH----SKKFKANGEAAYADEEATLPVSAKLA-QHNEENQMEAPLL 233
Query: 240 TCEREIANKGGF-WTNLKETVHQVVEELMAPPTVSAILGFVVGLVPWLKSLVIGNGAPLR 298
+CE ++A K + TNLK+T+H VVEELMAPPT+SAILGFV GLVPWLKSLVIG+GAPLR
Sbjct: 234 SCESKVAKKCSWTTTNLKDTIHHVVEELMAPPTLSAILGFVFGLVPWLKSLVIGDGAPLR 293
Query: 299 VIQESLQLMGNGTIPCITLILGGNLTQGLRKSVLKRTVIITIVCIRYVIQPLIGMAVVHA 358
VIQ+S+QLMGNGTIPC+TLILGGNL +GLRKS LKRTVII IVCIRYVI PL+G+AVVH
Sbjct: 294 VIQDSIQLMGNGTIPCVTLILGGNLIKGLRKSELKRTVIIAIVCIRYVILPLVGIAVVHG 353
Query: 359 AYGVGFLPHDPLYRYVLMMQFALPPAMNIGTMA 391
AY VGFLPHDPLYRYVLMMQFALPPAM IG ++
Sbjct: 354 AYWVGFLPHDPLYRYVLMMQFALPPAMTIGNLS 386
>Os09g0491740 Auxin Efflux Carrier family protein
Length = 379
Score = 281 bits (718), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 236/403 (58%), Gaps = 35/403 (8%)
Query: 1 MGFLSLLLVASMPIVQVLLIGVIGAFLASGYSKILTSSALRDMNKVVFTVFTPSLMFASL 60
MG L L + A +P++ +LL+ +G+FLA+ + IL A + +N +VF VF PSL+ L
Sbjct: 1 MGLLELFITACVPVLNMLLVTGVGSFLATDFVGILNKDARKYLNNIVFYVFNPSLVATYL 60
Query: 61 AKTVTLSDVISWWFMPVNIGITFIVGGTLGWIACKILKPPQHFRGMIIAFCSAGNLGNLL 120
A+T+TL + WFMPVNI + G LGWI + + P RG+I+ CSAGN GN+
Sbjct: 61 AQTITLEGLAKLWFMPVNILLACTFGLILGWIVVHVTRAPARLRGLILGCCSAGNWGNIF 120
Query: 121 LIIVPAVCDEDGNPFGKDRSLCRSRGLSYSSLSMALGGLFIWTHTYSLMQKAGKMYHKMQ 180
LII+PA+C E G+PFG +C + GL+YSSLSMALG +F+WT Y++M+ K+
Sbjct: 121 LIIIPALCKEKGSPFGAP-DVCHTYGLAYSSLSMALGAVFLWTVAYNIMRATSKV----- 174
Query: 181 SKSIQCPADSDEEHHPAQGHDQVKLDGETAYADEEAALLVSAKLAPEHNEENQMEAPLLT 240
+E + +V G + E L + N+ NQ PL++
Sbjct: 175 ----------ADEGNARTNDTKVSNSGSSTGTASEENLSIP-------NDNNQCTLPLIS 217
Query: 241 CEREIANKGGFWTNLKETVHQVV---------EELMAPPTVSAILGFVVGLVPWLKSLVI 291
++K L E + V +++ AP T++ I+GF++G P +++ +I
Sbjct: 218 NSSVPSSKTK--VTLSERAKRFVSSMFGAIDFKKIFAPSTIAVIIGFIIGGTPLIRNAII 275
Query: 292 GNGAPLRVIQESLQLMGNGTIPCITLILGGNLTQGLR-KSVLKRTVIITIVCIRYVIQPL 350
G APLRVI ES L+G G IP +TLI+GGNL GLR ++ ++ +VI +++ +RY++ P
Sbjct: 276 GENAPLRVIHESADLIGGGAIPSVTLIMGGNLLNGLRGEASVQPSVIASVIVVRYILLPS 335
Query: 351 IGMAVVHAAYGVGFLPHDPLYRYVLMMQFALPPAMNIGTMAQL 393
+G +V +A +G + DPLY+++L++Q+A+PPAMNIG ++
Sbjct: 336 LGTLLVKSAVHLGLIHPDPLYQFILLLQYAVPPAMNIGRKERM 378
>Os01g0818000 Auxin Efflux Carrier family protein
Length = 432
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 221/432 (51%), Gaps = 32/432 (7%)
Query: 4 LSLLLVASMPIVQVLLIGVIGAFLASGYSKILTSSALRDMNKVVFTVFTPSLMFASLAKT 63
+L A +PI +V + +G +AS Y IL + + +N +VF++ P L+F+ L +
Sbjct: 24 FDMLKYAVLPIAKVFTVCFMGFLMASKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGRA 83
Query: 64 VTLSDVISWWFMPVNIGITFIVGGTLGWIACKILKPPQHFRGMIIAFCSAGNLGNLLLII 123
+T+ ++ WW++PVNI + + G +G++ I++PP + + GN+GN+ L++
Sbjct: 84 ITIEKMLQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFTVIHIGIGNIGNIPLVL 143
Query: 124 VPAVCDEDGNPFGKDRSLCRSRGLSYSSLSMALGGLFIWTHTYSLMQKAGKMYHKMQSKS 183
+ A+C + NPFG D C G +Y S +G + ++T+ + KM +S
Sbjct: 144 IAALCRDPTNPFG-DSDKCNEDGNAYISFGQWVGAIIVYTYVF-------KMLAPPPGES 195
Query: 184 IQCPADSDEEHHPAQGHDQVKLDGETAYADEEAALLVSAKLAPEHNEENQMEAPLLTCER 243
A+ D A G + V G+ + + + PE+ PLL+ E
Sbjct: 196 FDS-AEEDILPIKASGDNVVPEKGKYPTSTRTSTV-------PENE-------PLLSSEG 240
Query: 244 EIANKGGFWTNLKETVHQVV-----EELMAPPTVSAILGFVVGLVPWLKSLVIGNGAPLR 298
+ + + V +V ++L+ PP ++++ +G+VP LK+ V+ + APL
Sbjct: 241 DKNVSTSLGSKIMGIVRSMVKFLKDKQLLQPPIIASVFAIAIGVVPVLKNFVLTDDAPLF 300
Query: 299 VIQESLQLMGNGTIPCITLILGGNLTQGLRKSVLKRTVIITIVCI--RYVIQPLIGMAVV 356
+S ++G IPCI L +GGNL G + + V T+ I R ++ PL G+ ++
Sbjct: 301 FFTDSCLILGEAMIPCILLAVGGNLVDGPGEGSNRLGVRTTVAIIFARLILVPLAGVGII 360
Query: 357 HAAYGVGFLPH-DPLYRYVLMMQFALPPAMNIGTMAQLFDVGQEECSVIFLWTYLIAAIA 415
+GF+P D ++++VL++Q ++P ++ G +A L G+E +++F W ++ A +
Sbjct: 361 VLVDKLGFIPKDDKMFKFVLLLQHSMPTSVLSGAVANLRGCGKESAAILF-WVHIFAVFS 419
Query: 416 LTTWSTIFMSIL 427
+ W +++S+L
Sbjct: 420 MAGWIILYLSLL 431
>Os08g0191000 Auxin Efflux Carrier family protein
Length = 455
Score = 191 bits (485), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 225/447 (50%), Gaps = 43/447 (9%)
Query: 10 ASMPIVQVLLIGVIGAFLASGYSKILTSSALRDMNKVVFTVFTPSLMFASLAKTVTLSDV 69
A MP++++L + VIG L++ ++I+ + + ++K+VF +F P L+F L ++VT+ ++
Sbjct: 23 AVMPLMKLLCLTVIGLVLSNPRTQIIPKATFKLLSKLVFALFLPCLIFVHLGQSVTIQNI 82
Query: 70 ISWWFMPVNIGITFIVGGTLGWIACKILKPPQHFRGMIIAFCSAGNLGNLLLIIVPAVCD 129
+ WWF+PVN+ I+ +G LG+I I +PP F + GN GNL + I+ +VC
Sbjct: 83 LDWWFIPVNVLISTAIGCILGYIVALICRPPPQFFRFTVIMTGFGNTGNLPIAIIGSVCH 142
Query: 130 EDGNPFGKDRSLCRSRGLSYSSLSMALGGLFIWTHTYSLMQKAGKMYHKM---------- 179
+PFG C +G++Y S + + + ++T Y +M+ + Y +
Sbjct: 143 TTDHPFGPG---CHRKGVAYVSFAQWVAVILVYTLVYHMMEPPMQFYEIVGEGNEIVEEP 199
Query: 180 -----QSKSI----QCP--ADSDEEHHP----AQGHDQVKLDGETAYADEEAALLVSAKL 224
S+S+ + P AD + EH A+ + + + D + A ++
Sbjct: 200 AQISNYSRSLLHEAEWPGMADKETEHSKTPFIARVFMSISGSSQNTFPDIDFAEEGTSGA 259
Query: 225 APEHNEENQ--MEAPLLTCEREIANKGGFWTNLKETVHQVVEELMAPPTVSAILGFVVGL 282
P + + E ++ R +A K ++ ++ PPT++++L V+G+
Sbjct: 260 GPSSPKSLRCLAEPKVVRRIRVVAEKTP------------IQHVLQPPTIASLLAIVIGM 307
Query: 283 VPWLKSLVIGNGAPLRVIQESLQLMGNGTIPCITLILGGNLTQGLRKSVLKRTVIITIVC 342
VP K V APL +SL+++ +P + LILGG L +G + + L I I+
Sbjct: 308 VPLFKDFVFVPDAPLSFFTDSLEILAQAVVPSVMLILGGMLAEGPKDNALGIRTITGIIV 367
Query: 343 IRYVIQPLIGMAVVHAAYGVGFL-PHDPLYRYVLMMQFALPPAMNIGTMAQLFDVGQEEC 401
R +I P IG+ VV A + L D +YR+VL +Q++ P A+ +G +A L +E
Sbjct: 368 ARLLILPCIGIGVVLLADRLHLLVEEDHMYRFVLSLQYSTPSAILLGAIASLRGYAVKEA 427
Query: 402 SVIFLWTYLIAAIALTTWSTIFMSILS 428
S + W ++ A ++L+ + ++ +L+
Sbjct: 428 SALLFWQHICAVLSLSIYLIVYFRLLT 454
>Os05g0481900 Auxin Efflux Carrier family protein
Length = 437
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 227/437 (51%), Gaps = 39/437 (8%)
Query: 4 LSLLLVASMPIVQVLLIGVIGAFLASGYSKILTSSALRDMNKVVFTVFTPSLMFASLAKT 63
L + A +PI +V ++ +G +AS +L S + +N +VF++ P L+FA L ++
Sbjct: 26 LGMFRYAVLPIAKVFVVCFMGFLMASKRVGVLKPSGRKLLNALVFSLLLPCLIFAQLGRS 85
Query: 64 VTLSDVISWWFMPVNIGITFIVGGTLGWIACKILKPPQHFRGMIIAFCSAGNLGNLLLII 123
+T+ ++ WWF+P NI + + +G I I++PP + I GN+GN+ L++
Sbjct: 86 ITIDKIMEWWFIPANIALGAVSASLVGLIVALIVRPPYPYFKFTITHIGIGNIGNIPLVL 145
Query: 124 VPAVCDEDGNPFGKDRSLCRSRGLSYSSLSMALGGLFIWTHTYSLMQ-KAGKMYHKMQSK 182
+ A+C + NPFG D + C G +Y S +G + ++T+ + ++ G+ + +
Sbjct: 146 ISALCRDQLNPFG-DSNKCTQDGNAYLSFGQWVGAIIVYTYVFKMLAPPPGQTFDSCDEE 204
Query: 183 SIQCPAD-----SDEEHHPAQGHDQVKLDGETAYADEEAALLVSAKLAPE--HNEENQME 235
+ P S +P+ H G T + ++ + + H+ +++
Sbjct: 205 RDKLPIKAPNTMSSVAKYPSSAH------GNTHEEEPLLSIEEEEEEEGQDVHSLGSKIM 258
Query: 236 APLLTCEREIANKGGFWTNLKETVHQVVEELMAPPTVSAILGFVVGLVPWLKSLVIGNGA 295
P+ R + K +L+ PP ++++L +G+VP+LK+L++ + A
Sbjct: 259 IPIKGMVRFLQKK----------------QLLQPPIIASVLAITLGVVPFLKNLILTDDA 302
Query: 296 PLRVIQESLQLMGNGTIPCITLILGGNLT----QGLRKSVLKRTVIITIVCIRYVIQPLI 351
PL + +S ++G IPCI L +GGNL +G R+ ++ TV I+ R ++ P+
Sbjct: 303 PLFFLTDSCLILGEAMIPCILLAVGGNLVDGPGEGSRRLGVRTTV--AIIFARLILVPIA 360
Query: 352 GMAVVHAAYGVGFLPH-DPLYRYVLMMQFALPPAMNIGTMAQLFDVGQEECSVIFLWTYL 410
G+ +V A +GF+P D ++++VL++Q ++P ++ G +A L G+E +++F W ++
Sbjct: 361 GIGIVSFADKLGFIPKGDKMFKFVLLLQHSMPTSVLSGAVANLRGCGKESAAILF-WVHI 419
Query: 411 IAAIALTTWSTIFMSIL 427
A ++ W +++++L
Sbjct: 420 FAVFSMAGWIILYLTML 436
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.138 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,387,488
Number of extensions: 598332
Number of successful extensions: 1700
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1687
Number of HSP's successfully gapped: 7
Length of query: 428
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 324
Effective length of database: 11,605,545
Effective search space: 3760196580
Effective search space used: 3760196580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)