BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0554000 Os09g0554000|J065123C23
(182 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0554000 Similar to Mitochondrial phosphate transporter 322 1e-88
Os02g0767500 Mitochondrial phosphate transporter 187 2e-48
Os06g0210500 Similar to Mitochondrial phosphate transporter 187 4e-48
Os04g0448800 Similar to Mitochondrial phosphate transporter... 184 2e-47
Os09g0454600 Similar to Mitochondrial phosphate transporter... 162 9e-41
AK119402 160 5e-40
Os03g0263400 Similar to Mitochondrial phosphate transporter... 135 1e-32
>Os09g0554000 Similar to Mitochondrial phosphate transporter
Length = 182
Score = 322 bits (825), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/182 (87%), Positives = 159/182 (87%)
Query: 1 MPEMXXXXXXXXXXXXXXXXXXXXXXXMRLFSPEYYALCTGGGMLAAGATHLAITPLDVL 60
MPEM MRLFSPEYYALCTGGGMLAAGATHLAITPLDVL
Sbjct: 1 MPEMGARGGEAGAARVANGGGGGGTGGMRLFSPEYYALCTGGGMLAAGATHLAITPLDVL 60
Query: 61 KVNMQVNPMKYNSIFSGLNILVKEEGASSLWRGWAGKFFGYGFQGGCKFGLYEYFKKKYS 120
KVNMQVNPMKYNSIFSGLNILVKEEGASSLWRGWAGKFFGYGFQGGCKFGLYEYFKKKYS
Sbjct: 61 KVNMQVNPMKYNSIFSGLNILVKEEGASSLWRGWAGKFFGYGFQGGCKFGLYEYFKKKYS 120
Query: 121 DVLVDRNKSTIYFISSASAQIIADVALCPFESVKVRVQTQPMFAKGLIDGFPRVYATEGL 180
DVLVDRNKSTIYFISSASAQIIADVALCPFESVKVRVQTQPMFAKGLIDGFPRVYATEGL
Sbjct: 121 DVLVDRNKSTIYFISSASAQIIADVALCPFESVKVRVQTQPMFAKGLIDGFPRVYATEGL 180
Query: 181 SG 182
SG
Sbjct: 181 SG 182
>Os02g0767500 Mitochondrial phosphate transporter
Length = 368
Score = 187 bits (476), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 112/159 (70%), Gaps = 4/159 (2%)
Query: 28 MRLFSPEYYALCTGGGMLAAGATHLAITPLDVLKVNMQVNPMKYNSIFSGLNILVKEEGA 87
+ ++SP +YA CT GG+ + G TH+A+TPLD++K NMQ++P KY SI SG +L+KE+G
Sbjct: 61 IEMYSPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDPAKYKSITSGFGVLLKEQGP 120
Query: 88 SSLWRGWAGKFFGYGFQGGCKFGLYEYFKKKYSDVL----VDRNKSTIYFISSASAQIIA 143
+RGW GY QG CKFG YE+FKK YSD+ + K+ IY SASA++IA
Sbjct: 121 RGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAQKYKTLIYLAGSASAEVIA 180
Query: 144 DVALCPFESVKVRVQTQPMFAKGLIDGFPRVYATEGLSG 182
DVALCPFE+VKVRVQTQP FA+GL DG P+ +EG G
Sbjct: 181 DVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALG 219
>Os06g0210500 Similar to Mitochondrial phosphate transporter
Length = 368
Score = 187 bits (475), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 87/159 (54%), Positives = 111/159 (69%), Gaps = 4/159 (2%)
Query: 28 MRLFSPEYYALCTGGGMLAAGATHLAITPLDVLKVNMQVNPMKYNSIFSGLNILVKEEGA 87
+ ++SP +YA CT GG+ + G TH+A+TPLD++K NMQ++P KY SI SG IL KE+G
Sbjct: 60 IEMYSPAFYAACTAGGIASCGLTHMAVTPLDLVKCNMQIDPAKYKSITSGFGILAKEQGV 119
Query: 88 SSLWRGWAGKFFGYGFQGGCKFGLYEYFKKKYSDVL----VDRNKSTIYFISSASAQIIA 143
+RGW GY QG CKFG YE+FKK YSD+ + K+ IY SASA++IA
Sbjct: 120 RGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAQKYKTLIYLAGSASAEVIA 179
Query: 144 DVALCPFESVKVRVQTQPMFAKGLIDGFPRVYATEGLSG 182
DVALCPFE+VKVRVQTQP FA+GL DG P+ +EG G
Sbjct: 180 DVALCPFEAVKVRVQTQPGFARGLGDGLPKFIKSEGALG 218
>Os04g0448800 Similar to Mitochondrial phosphate transporter (Fragment)
Length = 360
Score = 184 bits (468), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 111/159 (69%), Gaps = 4/159 (2%)
Query: 28 MRLFSPEYYALCTGGGMLAAGATHLAITPLDVLKVNMQVNPMKYNSIFSGLNILVKEEGA 87
+ ++SP +YA CT GG+ + G TH+ +TPLD++K NMQ++P KY SI SG +L+KE+GA
Sbjct: 62 IEMYSPAFYAACTAGGIASCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGA 121
Query: 88 SSLWRGWAGKFFGYGFQGGCKFGLYEYFKKKYSDVL----VDRNKSTIYFISSASAQIIA 143
+RGW GY QG CKFG YE+FKK YSD+ + K+ IY SASA++IA
Sbjct: 122 RGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIA 181
Query: 144 DVALCPFESVKVRVQTQPMFAKGLIDGFPRVYATEGLSG 182
D+ALCP E+VKVRVQTQP FA+GL DG P+ EG +G
Sbjct: 182 DIALCPMEAVKVRVQTQPGFARGLSDGLPKFVKAEGYAG 220
>Os09g0454600 Similar to Mitochondrial phosphate transporter (Fragment)
Length = 349
Score = 162 bits (411), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 109/159 (68%), Gaps = 4/159 (2%)
Query: 28 MRLFSPEYYALCTGGGMLAAGATHLAITPLDVLKVNMQVNPMKYNSIFSGLNILVKEEGA 87
+ LFSP YY+ C GG A G TH A+TPLDV+K N+Q++P KY S S ++++E+GA
Sbjct: 39 IELFSPAYYSACAFGGAAACGLTHAAVTPLDVIKCNIQIDPTKYKSTTSAFGVVMREQGA 98
Query: 88 SSLWRGWAGKFFGYGFQGGCKFGLYEYFKKKYSDVL----VDRNKSTIYFISSASAQIIA 143
+RGWA F GY QG K+GLYE FKK+Y+D+ R K+ IY SA+A++ A
Sbjct: 99 RGFYRGWAPTFLGYSAQGAFKYGLYEVFKKEYADMAGPEYAARYKTLIYLAGSATAEVAA 158
Query: 144 DVALCPFESVKVRVQTQPMFAKGLIDGFPRVYATEGLSG 182
DVALCP E+VKVRVQTQP +A+GL DGFP++ E +G
Sbjct: 159 DVALCPMEAVKVRVQTQPGYARGLSDGFPKIVRNESYAG 197
>AK119402
Length = 357
Score = 160 bits (405), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 104/155 (67%), Gaps = 4/155 (2%)
Query: 32 SPEYYALCTGGGMLAAGATHLAITPLDVLKVNMQVNPMKYNSIFSGLNILVKEEGASSLW 91
S +YYALC GG+L+ G TH A+ PLD++K MQV+P KY IF+G +I +KE+G L
Sbjct: 56 SMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLA 115
Query: 92 RGWAGKFFGYGFQGGCKFGLYEYFKKKYSDVLVDRN----KSTIYFISSASAQIIADVAL 147
+GWA GY QG CKFG YE FK YS++L + N ++++Y SSASA+ AD+AL
Sbjct: 116 KGWAPTLIGYSMQGLCKFGFYEVFKALYSNILGEENTYLWRTSLYLASSASAEFFADIAL 175
Query: 148 CPFESVKVRVQTQPMFAKGLIDGFPRVYATEGLSG 182
P E+ KVR+QTQP +A L + P++Y EGL+
Sbjct: 176 APMEAAKVRIQTQPGYANTLREAVPKMYKEEGLNA 210
>Os03g0263400 Similar to Mitochondrial phosphate transporter (Fragment)
Length = 271
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
Query: 54 ITPLDVLKVNMQVNPMKYNSIFSGLNILVKEEGASSLWRGWAGKFFGYGFQGGCKFGLYE 113
+ + V V +QV+P KY I SG +L++E+G ++GW GY QG CKFG YE
Sbjct: 2 VNGIRVYNVFLQVDPGKYRDISSGFGVLLQEQGLGGFFKGWMATLVGYSSQGACKFGFYE 61
Query: 114 YFKKKYSDVL----VDRNKSTIYFISSASAQIIADVALCPFESVKVRVQTQPMFAKGLID 169
+FKK YSD+ ++ K+ IY +SASA++IADVALCP E+VKVRVQTQP FA+ L D
Sbjct: 62 FFKKCYSDIAGPEHAEKWKTFIYLAASASAEMIADVALCPMEAVKVRVQTQPGFARCLTD 121
Query: 170 GFPRVYATEGLSG 182
GFP++ +EG G
Sbjct: 122 GFPKIVQSEGAFG 134
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.139 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,383,885
Number of extensions: 196310
Number of successful extensions: 610
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 606
Number of HSP's successfully gapped: 7
Length of query: 182
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 87
Effective length of database: 12,075,471
Effective search space: 1050565977
Effective search space used: 1050565977
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 153 (63.5 bits)