Os09g0454600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Mitochondrial phosphate transporter (Fragment).
FiT-DB / Search/ Help/ Sample detail
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Os09g0454600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Mitochondrial phosphate transporter (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 171.62 | 0.616 | 8.34 | 1.01 | 1.5 | -1.91 | 0.426 | -2.51 | 0.635 | 9.41 | 1.419 | 4406 | -- | -- |
| 177.53 | 0.621 | 8.4 | 0.554 | 1.53 | -1.58 | 0.789 | -- | 0.55 | 9.4 | 1.99 | 5877 | -- | -- |
| 172.23 | 0.611 | 8.35 | 1.03 | 1.48 | -1.94 | -- | -2.62 | 0.631 | 9.39 | 1.41 | 4411 | -- | -- |
| 179.26 | 0.624 | 8.4 | 0.58 | 1.53 | -1.58 | -- | -- | 0.55 | 9.45 | 1.989 | 5871 | -- | -- |
| 251.6 | 0.743 | 8.37 | 0.973 | -- | -1.08 | -- | -0.223 | 0.853 | -- | 1.41 | 4411 | -- | -- |
| 216.53 | 0.69 | 8.32 | 0.992 | 1.65 | -- | 0.605 | -- | 0.864 | 9.73 | -- | -- | -- | -- |
| 217.92 | 0.691 | 8.32 | 1.02 | 1.64 | -- | -- | -- | 0.866 | 9.73 | -- | -- | -- | -- |
| 251.92 | 0.742 | 8.37 | 0.97 | -- | -1.08 | -- | -- | 0.852 | -- | 1.41 | 4411 | -- | -- |
| 187.02 | 0.637 | 8.39 | -- | 1.53 | -1.81 | -- | -- | 0.477 | 9.46 | 1.79 | 5859 | -- | -- |
| 378.58 | 0.909 | 8.37 | 1 | -- | -- | -- | -- | 0.867 | -- | -- | -- | -- | -- |
| 245.08 | 0.732 | 8.35 | -- | 1.64 | -- | -- | -- | 0.752 | 9.69 | -- | -- | -- | -- |
| 276.73 | 0.777 | 8.4 | -- | -- | -1.09 | -- | -- | 0.744 | -- | 1.41 | 4411 | -- | -- |
| 404.94 | 0.939 | 8.39 | -- | -- | -- | -- | -- | 0.757 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 164.18 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 2 | 164.41 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 12 | 166.62 | radiation | 10 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 14 | 166.83 | radiation | 20 | 4320 | < th | dose dependent | rect. | 18 | 5 |
| 15 | 166.84 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 18 | 167.03 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 19 | 167.07 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 23 | 167.13 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 27 | 167.17 | radiation | 10 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 40 | 168.08 | radiation | 10 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 89 | 169.59 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 14 |
| 126 | 170.37 | humidity | 90 | 14400 | > th | dose dependent | rect. | 11 | 20 |
| 137 | 170.72 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 21 |
| 154 | 170.99 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 184 | 171.21 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 198 | 171.30 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 199 | 171.33 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 200 | 171.33 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 209 | 171.37 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 217 | 171.41 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 218 | 171.42 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 224 | 171.45 | humidity | 90 | 14400 | > th | dose dependent | sin | 10 | NA |
| 242 | 171.53 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 12 | 5 |
| 244 | 171.53 | humidity | 90 | 14400 | > th | dose dependent | sin | 5 | NA |
| 255 | 171.58 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 12 | 8 |
| 260 | 171.60 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 262 | 171.60 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 281 | 171.67 | radiation | 1 | 4320 | > th | dose independent | sin | 11 | NA |
| 284 | 171.67 | radiation | 1 | 1440 | < th | dose dependent | sin | 10 | NA |
| 291 | 171.70 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 293 | 171.71 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 309 | 171.74 | humidity | 90 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 311 | 171.76 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 15 | 5 |
| 312 | 171.76 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 324 | 171.78 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 12 | 8 |
| 364 | 171.87 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 365 | 171.87 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 423 | 172.07 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 424 | 172.07 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 12 | 5 |
| 426 | 172.07 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 471 | 172.28 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 511 | 172.48 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 514 | 172.48 | radiation | 1 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 524 | 172.53 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 6 |
| 561 | 172.67 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 564 | 172.68 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 571 | 172.69 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 586 | 172.74 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 5 |
| 595 | 172.77 | radiation | 1 | 4320 | < th | dose independent | sin | 11 | NA |
| 598 | 172.79 | radiation | 1 | 1440 | < th | dose dependent | rect. | 22 | 9 |
| 605 | 172.82 | atmosphere | 1005 | 43200 | > th | dose independent | sin | 18 | NA |
| 626 | 172.87 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 630 | 172.90 | temperature | 30 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 636 | 172.92 | temperature | 10 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 638 | 172.93 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 641 | 172.94 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 644 | 172.94 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 20 |
| 649 | 172.95 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 18 |
| 659 | 172.97 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 14 |
| 670 | 173.00 | temperature | 30 | 14400 | < th | dose dependent | rect. | 13 | 17 |
| 714 | 173.09 | atmosphere | 1005 | 43200 | < th | dose independent | sin | 18 | NA |
| 716 | 173.09 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 7 |
| 752 | 173.12 | temperature | 10 | 14400 | > th | dose dependent | rect. | 13 | 17 |
| 754 | 173.13 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 5 |
| 799 | 173.18 | radiation | 1 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 809 | 173.18 | temperature | 30 | 14400 | < th | dose dependent | sin | 14 | NA |
| 880 | 173.25 | temperature | 10 | 14400 | > th | dose dependent | sin | 13 | NA |
| 883 | 173.25 | temperature | 10 | 14400 | > th | dose dependent | rect. | 18 | 12 |
| 934 | 173.30 | temperature | 10 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 969 | 173.32 | temperature | 30 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 980 | 173.33 | temperature | 10 | 14400 | > th | dose dependent | rect. | 18 | 9 |