Os03g0263400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Mitochondrial phosphate transporter (Fragment).
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Os03g0263400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Mitochondrial phosphate transporter (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.05 | 0.312 | 11.6 | -1.06 | 1.14 | -0.527 | 0.175 | 0.415 | -0.574 | 7.6 | 20.4 | 214 | -- | -- |
| 44.74 | 0.312 | 11.6 | -1.12 | 1.14 | -0.541 | 0.139 | -- | -0.599 | 7.62 | 20.4 | 197 | -- | -- |
| 44.12 | 0.309 | 11.6 | -1.06 | 1.14 | -0.528 | -- | 0.395 | -0.574 | 7.61 | 20.4 | 201 | -- | -- |
| 44.75 | 0.312 | 11.6 | -1.13 | 1.14 | -0.561 | -- | -- | -0.59 | 7.63 | 20.5 | 197 | -- | -- |
| 87.28 | 0.435 | 11.6 | -0.986 | -- | -0.887 | -- | 0.335 | -0.418 | -- | 25.9 | 514 | -- | -- |
| 55.87 | 0.35 | 11.6 | -1.3 | 1.17 | -- | 0.144 | -- | -0.7 | 7.3 | -- | -- | -- | -- |
| 55.93 | 0.35 | 11.6 | -1.3 | 1.17 | -- | -- | -- | -0.7 | 7.29 | -- | -- | -- | -- |
| 88.27 | 0.438 | 11.6 | -1.02 | -- | -0.855 | -- | -- | -0.421 | -- | 25.9 | 518 | -- | -- |
| 53.36 | 0.34 | 11.5 | -- | 1.17 | -1.17 | -- | -- | -0.342 | 7.26 | 16.11 | 47520 | -- | -- |
| 128.27 | 0.529 | 11.6 | -1.28 | -- | -- | -- | -- | -0.68 | -- | -- | -- | -- | -- |
| 100.56 | 0.469 | 11.6 | -- | 1.16 | -- | -- | -- | -0.555 | 7.36 | -- | -- | -- | -- |
| 114.99 | 0.499 | 11.5 | -- | -- | -1.02 | -- | -- | -0.295 | -- | 26.2 | 562 | -- | -- |
| 171.56 | 0.611 | 11.6 | -- | -- | -- | -- | -- | -0.538 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.62 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 15 |
| 10 | 41.26 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 21 |
| 12 | 41.34 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 19 |
| 14 | 41.54 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 9 |
| 15 | 41.57 | temperature | 20 | 90 | > th | dose independent | rect. | 23 | 18 |
| 16 | 41.58 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 7 |
| 17 | 41.65 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 14 |
| 24 | 41.83 | temperature | 20 | 10 | > th | dose independent | rect. | 12 | 17 |
| 66 | 42.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 18 |
| 74 | 43.12 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 84 | 43.24 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 19 |
| 110 | 43.51 | temperature | 20 | 270 | < th | dose independent | rect. | 11 | 19 |
| 112 | 43.53 | temperature | 20 | 270 | < th | dose independent | rect. | 15 | 15 |
| 131 | 43.62 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 9 |
| 201 | 43.92 | temperature | 20 | 270 | < th | dose independent | sin | 13 | NA |
| 242 | 44.04 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 6 |
| 280 | 44.13 | temperature | 20 | 270 | > th | dose independent | sin | 14 | NA |
| 284 | 44.14 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 17 |
| 315 | 44.21 | temperature | 15 | 10 | > th | dose dependent | rect. | 13 | 16 |
| 351 | 44.33 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 23 |
| 435 | 44.51 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 438 | 44.52 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 18 |
| 462 | 44.55 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 21 |
| 467 | 44.56 | temperature | 25 | 270 | < th | dose dependent | sin | 14 | NA |
| 506 | 44.64 | temperature | 20 | 720 | < th | dose independent | rect. | 10 | 15 |
| 521 | 44.67 | temperature | 20 | 720 | > th | dose independent | sin | 18 | NA |
| 541 | 44.70 | temperature | 25 | 720 | < th | dose dependent | sin | 18 | NA |
| 558 | 44.73 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 15 |
| 621 | 44.83 | temperature | 20 | 10 | < th | dose independent | sin | 11 | NA |
| 623 | 44.83 | temperature | 20 | 720 | < th | dose independent | rect. | 13 | 12 |
| 654 | 44.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 659 | 44.89 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 21 |
| 661 | 44.89 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 681 | 44.92 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 698 | 44.96 | temperature | 20 | 720 | < th | dose independent | sin | 18 | NA |
| 749 | 45.02 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 799 | 45.07 | wind | 1 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 824 | 45.11 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 829 | 45.11 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 23 |
| 986 | 45.29 | temperature | 20 | 270 | < th | dose independent | rect. | 4 | 23 |