Os06g0210500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Mitochondrial phosphate transporter.
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Os06g0210500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Mitochondrial phosphate transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.26 | 0.507 | 9.53 | -1.46 | 0.975 | 1.21 | -0.371 | -1.41 | -0.066 | 0.505 | 20.6 | 1344 | -- | -- |
| 119.98 | 0.51 | 9.49 | -1.24 | 0.99 | 1.48 | -0.505 | -- | -0.0179 | 0.537 | 20.3 | 1417 | -- | -- |
| 116.74 | 0.503 | 9.53 | -1.44 | 0.967 | 1.2 | -- | -1.4 | -0.0565 | 0.452 | 20.55 | 1310 | -- | -- |
| 121.1 | 0.513 | 9.49 | -1.21 | 0.986 | 1.47 | -- | -- | -0.00758 | 0.459 | 20.29 | 1384 | -- | -- |
| 168.28 | 0.604 | 9.52 | -1.39 | -- | 1.34 | -- | -1.22 | -0.0643 | -- | 20.5 | 1069 | -- | -- |
| 164.09 | 0.601 | 9.42 | -0.635 | 1.04 | -- | -0.57 | -- | 0.302 | 0.685 | -- | -- | -- | -- |
| 165.42 | 0.602 | 9.42 | -0.613 | 1.04 | -- | -- | -- | 0.306 | 0.571 | -- | -- | -- | -- |
| 172.29 | 0.611 | 9.48 | -1.19 | -- | 1.54 | -- | -- | -0.0142 | -- | 20.4 | 1053 | -- | -- |
| 152.16 | 0.575 | 9.45 | -- | 0.948 | 0.907 | -- | -- | 0.204 | 0.402 | 20.5 | 1193 | -- | -- |
| 232.79 | 0.713 | 9.4 | -0.577 | -- | -- | -- | -- | 0.323 | -- | -- | -- | -- | -- |
| 175.33 | 0.619 | 9.4 | -- | 1.03 | -- | -- | -- | 0.374 | 0.541 | -- | -- | -- | -- |
| 203.71 | 0.665 | 9.43 | -- | -- | 1.08 | -- | -- | 0.189 | -- | 20.59 | 954 | -- | -- |
| 241.58 | 0.725 | 9.39 | -- | -- | -- | -- | -- | 0.387 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.98 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 10 |
| 4 | 112.10 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 8 |
| 6 | 112.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 6 |
| 9 | 112.20 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 10 |
| 15 | 112.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 21 | 112.46 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 12 |
| 41 | 113.00 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 50 | 113.14 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 116 | 114.19 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 19 |
| 119 | 114.24 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 18 |
| 123 | 114.26 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 137 | 114.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 19 |
| 174 | 114.74 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 213 | 115.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 222 | 115.15 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 233 | 115.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 3 |
| 239 | 115.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 6 |
| 253 | 115.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 9 |
| 308 | 115.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 16 |
| 353 | 115.87 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 7 |
| 359 | 115.91 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 475 | 116.37 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 508 | 116.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 522 | 116.51 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 529 | 116.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 659 | 116.83 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 719 | 116.98 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 732 | 117.01 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 804 | 117.24 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 835 | 117.33 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 878 | 117.46 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 934 | 117.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 960 | 117.69 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 972 | 117.75 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 996 | 117.84 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 23 |