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Os04g0448800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Mitochondrial phosphate transporter (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.97 (0.032) R2 : 0.695
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.45 (0.0829) R2dC : 0.24 R2C : 0.434
β3 : -1.71 (0.0962) R2dE : 0.25 R2E : 0.447
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.222 (0.0674) R2dN8 : 0.00926 R2N8 : 0.0101
σ : 0.601
deviance : 166.45
__
_____
C
peak time of C : 12.1
E
wheather : radiation
threshold : 0.3498
memory length : 280
response mode : < th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 23.9
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
150.55 0.576 7.97 -0.447 1.47 -1.7 -0.369 -2.4 -0.26 12.2 0.09929 301 23.7 --
162.18 0.593 7.97 -0.472 1.43 -1.72 0.186 -- -0.237 12.2 0.1035 298 0.00843 --
150.93 0.572 7.97 -0.44 1.52 -1.71 -- -2.24 -0.257 12.2 0.09926 304 23.4 --
162.17 0.593 7.97 -0.402 1.44 -1.75 -- -- -0.25 12.2 0.1094 289 23.8 --
176.95 0.62 7.96 -0.374 -- -2.22 -- -1.19 -0.199 -- 1.36 248 4.1 --
185.63 0.639 8 -0.387 2.41 -- 1.17 -- -0.269 14.4 -- -- -- --
190.57 0.646 7.99 -0.355 2.41 -- -- -- -0.262 14.3 -- -- -- --
181.33 0.627 7.97 -0.344 -- -2.23 -- -- -0.228 -- 1.359 253 4.35 --
166.45 0.601 7.97 -- 1.45 -1.71 -- -- -0.222 12.1 0.3498 280 23.9 --
534.72 1.08 8.01 -0.456 -- -- -- -- -0.321 -- -- -- -- --
193.88 0.651 7.98 -- 2.41 -- -- -- -0.223 14.3 -- -- -- --
183.22 0.63 7.99 -- -- -2.24 -- -- -0.222 -- 7.469 220 4.66 --
540.22 1.08 8 -- -- -- -- -- -0.27 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 148.89 wind 1.0 270 > th dose independent rect. 1 4
2 148.94 wind 5.0 270 < th dose independent rect. 24 6
3 149.29 wind 5.0 270 < th dose independent rect. 1 4
5 149.99 temperature 15.0 270 > th dose independent rect. 10 10
7 150.06 radiation 1.0 270 < th dose independent rect. 24 6
9 150.27 wind 9.0 270 < th dose independent rect. 5 20
10 150.28 radiation 1.0 270 < th dose dependent rect. 1 4
12 150.37 radiation 10.0 270 < th dose dependent rect. 24 6
13 150.38 temperature 10.0 270 > th dose independent rect. 1 4
15 150.38 temperature 30.0 270 < th dose independent rect. 1 4
16 150.38 humidity 50.0 270 > th dose independent rect. 1 4
19 150.38 atmosphere 995.0 270 > th dose independent rect. 1 4
20 150.38 atmosphere 1010.0 270 < th dose independent rect. 1 4
22 150.38 radiation 20.0 270 < th dose independent rect. 1 4
25 150.38 temperature 10.0 270 > th dose independent rect. 5 20
26 150.39 radiation 20.0 270 < th dose dependent rect. 1 4
36 150.65 precipitation 0.1 270 < th dose independent rect. 1 4
37 150.65 precipitation 0.1 270 < th dose dependent rect. 1 4
39 150.75 atmosphere 1010.0 270 < th dose independent rect. 24 6
46 150.89 wind 9.0 270 < th dose independent rect. 6 18
49 150.96 temperature 15.0 270 > th dose independent rect. 24 6
52 150.97 temperature 30.0 270 < th dose independent rect. 24 6
53 150.97 humidity 50.0 270 > th dose independent rect. 24 6
56 150.97 atmosphere 995.0 270 > th dose independent rect. 24 6
57 150.97 radiation 20.0 270 < th dose independent rect. 24 6
60 150.97 temperature 10.0 270 > th dose independent rect. 6 18
64 151.06 precipitation 0.1 270 < th dose independent rect. 24 6
65 151.06 precipitation 0.1 270 < th dose dependent rect. 24 6
67 151.14 radiation 40.0 10 < th dose dependent rect. 3 6
71 151.25 humidity 50.0 270 > th dose independent rect. 20 14
73 151.28 radiation 1.0 270 < th dose dependent sin 5 NA
75 151.29 atmosphere 1015.0 270 < th dose independent rect. 10 10
76 151.29 temperature 10.0 270 > th dose independent rect. 20 14
77 151.29 atmosphere 995.0 270 > th dose independent rect. 20 14
78 151.31 radiation 1.0 270 < th dose independent rect. 24 12
80 151.32 radiation 1.0 270 < th dose dependent rect. 1 11
88 151.41 wind 9.0 270 < th dose independent rect. 20 14
91 151.52 precipitation 0.1 270 < th dose independent rect. 5 20
92 151.52 precipitation 0.1 270 < th dose dependent rect. 5 20
95 151.58 wind 9.0 10 < th dose dependent rect. 3 6
104 151.79 precipitation 0.1 270 < th dose independent rect. 6 18
106 151.79 precipitation 0.1 270 < th dose dependent rect. 6 18
110 151.84 radiation 1.0 270 < th dose independent sin 6 NA
140 152.00 wind 9.0 270 < th dose independent rect. 10 10
143 152.07 wind 1.0 270 > th dose independent rect. 10 10
145 152.08 precipitation 0.1 270 < th dose independent rect. 20 14
147 152.08 precipitation 0.1 270 < th dose dependent rect. 20 14
152 152.16 precipitation 0.1 270 < th dose independent rect. 10 10
153 152.16 precipitation 0.1 270 < th dose dependent rect. 10 10
168 152.70 wind 5.0 10 < th dose independent rect. 3 6
184 152.96 wind 9.0 270 < th dose dependent rect. 1 4
197 153.10 temperature 10.0 10 > th dose independent rect. 3 6
199 153.10 temperature 30.0 10 < th dose independent rect. 3 6
200 153.10 humidity 50.0 10 > th dose independent rect. 3 6
202 153.10 atmosphere 995.0 10 > th dose independent rect. 3 6
203 153.10 atmosphere 1015.0 10 < th dose independent rect. 3 6
204 153.10 temperature 10.0 10 > th dose independent rect. 9 18
206 153.12 radiation 40.0 10 < th dose independent rect. 3 6
208 153.15 wind 9.0 30 < th dose independent rect. 9 18
209 153.15 precipitation 0.1 10 < th dose independent rect. 9 18
210 153.15 precipitation 0.1 10 < th dose dependent rect. 9 18
212 153.16 humidity 50.0 270 > th dose dependent rect. 1 4
266 153.47 wind 9.0 270 < th dose dependent rect. 24 6
270 153.49 radiation 10.0 90 < th dose dependent rect. 3 5
271 153.50 precipitation 0.1 30 < th dose independent rect. 3 6
272 153.50 precipitation 0.1 30 < th dose dependent rect. 3 6
277 153.54 humidity 50.0 270 > th dose independent rect. 5 8
279 153.56 temperature 15.0 270 > th dose independent rect. 11 18
282 153.57 atmosphere 1010.0 270 < th dose independent rect. 11 18
285 153.58 temperature 10.0 270 > th dose independent rect. 5 8
286 153.58 atmosphere 995.0 270 > th dose independent rect. 5 8
287 153.58 atmosphere 1015.0 270 < th dose independent rect. 5 8
288 153.58 temperature 10.0 270 > th dose independent rect. 13 16
291 153.64 precipitation 0.1 270 < th dose independent rect. 5 8
292 153.64 precipitation 0.1 270 < th dose dependent rect. 5 8
293 153.68 wind 1.0 270 > th dose independent rect. 11 18
296 153.70 humidity 50.0 30 > th dose dependent rect. 3 6
299 153.73 radiation 1.0 270 > th dose independent sin 6 NA
302 153.76 temperature 10.0 270 > th dose dependent rect. 1 4
304 153.80 atmosphere 1015.0 270 < th dose dependent rect. 1 4
305 153.82 radiation 1.0 90 < th dose independent rect. 3 5
329 153.88 wind 9.0 270 < th dose independent rect. 5 8
330 153.88 radiation 1.0 90 < th dose independent rect. 3 9
339 153.97 wind 9.0 270 < th dose independent rect. 13 16
344 154.14 atmosphere 1015.0 1440 < th dose independent rect. 3 7
345 154.15 humidity 50.0 270 > th dose independent rect. 5 6
348 154.16 temperature 10.0 270 > th dose dependent rect. 24 6
354 154.21 temperature 10.0 270 > th dose independent rect. 5 6
355 154.21 atmosphere 995.0 270 > th dose independent rect. 5 6
356 154.21 atmosphere 1015.0 270 < th dose independent rect. 5 6
362 154.26 precipitation 0.1 270 < th dose independent rect. 5 6
363 154.26 precipitation 0.1 270 < th dose dependent rect. 5 6
375 154.36 radiation 40.0 270 < th dose independent rect. 12 17
389 154.45 wind 9.0 270 < th dose independent rect. 5 6
407 154.66 radiation 40.0 90 < th dose dependent rect. 3 12
415 154.77 wind 9.0 270 < th dose independent rect. 11 18
421 154.83 precipitation 0.1 270 < th dose independent rect. 13 16
422 154.83 precipitation 0.1 270 < th dose dependent rect. 13 16
428 154.89 atmosphere 995.0 270 > th dose independent rect. 6 18
435 154.94 radiation 10.0 90 < th dose dependent rect. 3 12
449 154.99 radiation 1.0 90 < th dose dependent rect. 3 9
456 155.06 atmosphere 995.0 270 > th dose independent rect. 10 10
468 155.10 atmosphere 995.0 270 > th dose independent rect. 5 20
492 155.23 temperature 15.0 270 > th dose independent rect. 4 23
505 155.30 radiation 10.0 10 < th dose dependent rect. 3 11
526 155.41 atmosphere 995.0 10 > th dose independent rect. 9 18
528 155.42 temperature 15.0 270 > th dose independent rect. 10 20
552 155.50 radiation 1.0 90 > th dose independent sin 2 NA
585 155.68 atmosphere 995.0 270 > th dose independent rect. 13 16
633 155.85 temperature 15.0 270 > th dose independent rect. 1 15
651 155.93 radiation 10.0 10 < th dose dependent rect. 3 9
690 156.09 temperature 10.0 1440 > th dose independent rect. 3 7
693 156.09 atmosphere 995.0 1440 > th dose independent rect. 3 7
694 156.09 temperature 10.0 1440 > th dose independent rect. 10 17
699 156.10 wind 5.0 270 < th dose independent rect. 3 1
707 156.16 temperature 30.0 270 < th dose dependent rect. 1 4
779 156.38 wind 9.0 270 < th dose independent rect. 16 9
802 156.50 temperature 10.0 270 > th dose independent rect. 3 1
804 156.50 temperature 30.0 270 < th dose independent rect. 3 1
805 156.50 humidity 50.0 270 > th dose independent rect. 3 1
808 156.50 atmosphere 995.0 270 > th dose independent rect. 3 1
809 156.50 atmosphere 1010.0 270 < th dose independent rect. 3 1
811 156.50 radiation 1.0 270 < th dose independent rect. 3 1
825 156.53 temperature 10.0 270 > th dose independent rect. 16 9
826 156.53 radiation 30.0 270 < th dose independent rect. 16 9
829 156.53 atmosphere 1015.0 270 < th dose independent rect. 1 15
882 156.66 radiation 40.0 270 < th dose dependent rect. 15 10
926 156.75 wind 9.0 270 < th dose independent rect. 1 15
993 156.99 radiation 40.0 10 < th dose dependent rect. 3 12