Os09g0554000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Mitochondrial phosphate transporter.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0554000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Mitochondrial phosphate transporter.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 251.39 | 0.745 | 9.33 | -1.13 | 2.75 | -2.72 | 1.55 | -0.1 | -0.635 | 10.5 | 3.429 | 82 | 19.4 | -- |
| 251.4 | 0.738 | 9.33 | -1.13 | 2.75 | -2.72 | 1.55 | -- | -0.635 | 10.5 | 3.429 | 82 | 19.4 | -- |
| 260.61 | 0.752 | 9.32 | -1.1 | 2.76 | -2.66 | -- | -0.469 | -0.624 | 10.6 | 3.269 | 95 | 19.4 | -- |
| 260.76 | 0.752 | 9.32 | -1.1 | 2.76 | -2.66 | -- | -- | -0.624 | 10.5 | 3.236 | 97 | 19.4 | -- |
| 629.38 | 1.17 | 9.34 | -1.38 | -- | -4.71 | -- | -4.58 | -0.319 | -- | 0.9095 | 150 | 17.6 | -- |
| 367.5 | 0.899 | 9.31 | -1.12 | 2.98 | -- | 1.41 | -- | -0.512 | 11.6 | -- | -- | -- | -- |
| 376 | 0.908 | 9.3 | -1.07 | 2.97 | -- | -- | -- | -0.506 | 11.6 | -- | -- | -- | -- |
| 649.06 | 1.19 | 9.4 | -1.39 | -- | -4.51 | -- | -- | -0.67 | -- | 0.99 | 113 | 17.7 | -- |
| 291.32 | 0.795 | 9.3 | -- | 2.76 | -2.69 | -- | -- | -0.509 | 10.6 | 3.735 | 84 | 19.5 | -- |
| 931.15 | 1.43 | 9.37 | -1.15 | -- | -- | -- | -- | -0.54 | -- | -- | -- | -- | -- |
| 405.95 | 0.942 | 9.28 | -- | 2.98 | -- | -- | -- | -0.387 | 11.6 | -- | -- | -- | -- |
| 698.42 | 1.23 | 9.38 | -- | -- | -4.06 | -- | -- | -0.539 | -- | 1.371 | 92 | 17.9 | -- |
| 965.94 | 1.45 | 9.34 | -- | -- | -- | -- | -- | -0.413 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 255.34 | radiation | 1.0 | 90 | > th | dose independent | sin | 1 | NA |
| 2 | 257.81 | radiation | 1.0 | 90 | < th | dose independent | sin | 1 | NA |
| 5 | 262.50 | radiation | 1.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 6 | 264.59 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 31 | 272.63 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 43 | 274.64 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 54 | 275.86 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 57 | 276.11 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 1 | 15 |
| 62 | 276.41 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 2 | 15 |
| 71 | 276.98 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 74 | 277.08 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 82 | 277.42 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 93 | 278.18 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 100 | 278.48 | humidity | 80.0 | 10 | > th | dose dependent | sin | 3 | NA |
| 106 | 278.85 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 14 |
| 116 | 279.14 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 13 |
| 179 | 281.53 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 20 |
| 242 | 283.65 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 12 | 21 |
| 292 | 284.58 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 458 | 287.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 23 |
| 460 | 287.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 472 | 287.94 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 1 | 8 |
| 509 | 288.61 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 9 |
| 516 | 288.71 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 20 | 4 |
| 555 | 289.26 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 2 |
| 568 | 289.46 | humidity | 80.0 | 10 | > th | dose independent | rect. | 2 | 18 |
| 605 | 290.02 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 2 | 7 |
| 623 | 290.24 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 12 |
| 646 | 290.29 | temperature | 20.0 | 30 | > th | dose independent | rect. | 16 | 14 |
| 649 | 290.35 | radiation | 10.0 | 90 | < th | dose dependent | no | NA | NA |
| 653 | 290.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 19 |
| 654 | 290.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 19 |
| 700 | 291.02 | humidity | 80.0 | 10 | > th | dose independent | rect. | 1 | 21 |
| 702 | 291.02 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 791 | 292.03 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 13 | 17 |
| 801 | 292.12 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 842 | 292.53 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 24 | 5 |
| 890 | 293.08 | humidity | 80.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 969 | 293.90 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 6 |