BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0537700 Os09g0537700|AK061438
(252 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0537700 Ribonuclease T2 family protein 525 e-150
Os09g0538000 Ribonuclease T2 family protein 184 4e-47
Os08g0434100 Similar to S-like ribonuclease (RNase PD2) (Fr... 146 1e-35
Os07g0630400 Ribonuclease T2 family protein 112 2e-25
Os07g0629900 86 2e-17
Os07g0629300 77 8e-15
Os01g0897200 Similar to Ribonuclease 2 precursor (EC 3.1.27.1) 68 7e-12
Os01g0897300 Ribonuclease T2 family protein 64 1e-10
>Os09g0537700 Ribonuclease T2 family protein
Length = 252
Score = 525 bits (1353), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 1 MEQRKFLLCLILGLLATSGPAKTVNADSPFDFYYLILMWPGAYCTDSEYGCCVPKYGYPS 60
MEQRKFLLCLILGLLATSGPAKTVNADSPFDFYYLILMWPGAYCTDSEYGCCVPKYGYPS
Sbjct: 1 MEQRKFLLCLILGLLATSGPAKTVNADSPFDFYYLILMWPGAYCTDSEYGCCVPKYGYPS 60
Query: 61 EDFFVKSFMTFDSSENTAVVRCNSDNPFDINKLDSIENNLNHYWSNIKCPRTDGVNSWKS 120
EDFFVKSFMTFDSSENTAVVRCNSDNPFDINKLDSIENNLNHYWSNIKCPRTDGVNSWKS
Sbjct: 61 EDFFVKSFMTFDSSENTAVVRCNSDNPFDINKLDSIENNLNHYWSNIKCPRTDGVNSWKS 120
Query: 121 EWNSYGVCSGLKELDYFKAGLQLRKNADVLSALAEQGIKPDYQLYNTAFIKWAVNQKLGV 180
EWNSYGVCSGLKELDYFKAGLQLRKNADVLSALAEQGIKPDYQLYNTAFIKWAVNQKLGV
Sbjct: 121 EWNSYGVCSGLKELDYFKAGLQLRKNADVLSALAEQGIKPDYQLYNTAFIKWAVNQKLGV 180
Query: 181 TPGVQCRDGPFGKKQLYEIYLCVDKDAKSFIDCPVLPNLSCPAEVLFHPFHTWMLNTTSA 240
TPGVQCRDGPFGKKQLYEIYLCVDKDAKSFIDCPVLPNLSCPAEVLFHPFHTWMLNTTSA
Sbjct: 181 TPGVQCRDGPFGKKQLYEIYLCVDKDAKSFIDCPVLPNLSCPAEVLFHPFHTWMLNTTSA 240
Query: 241 ANIVMPTETVLA 252
ANIVMPTETVLA
Sbjct: 241 ANIVMPTETVLA 252
>Os09g0538000 Ribonuclease T2 family protein
Length = 251
Score = 184 bits (468), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 10/209 (4%)
Query: 32 FYYLILMWPGAYCTDSEYGCCVPKYGYPSEDFFVKSFMTFDSSENTAVVRCNSDNPFDIN 91
FY + MWPGAYC ++ GCC+PK V F ++++ N+++ C S+ PFD+N
Sbjct: 32 FYQITFMWPGAYCAQTKAGCCMPKTD-------VAGFTVYNATTNSSLSSC-SNTPFDMN 83
Query: 92 KLDSIENNLNHYWSNIKCPRTDGVNSWKSEWNSYGVCSGLKELDYFKAGLQLRKNADVLS 151
++ + L YW+NI+CP G WK+ W + GVCS L E YF L LR + LS
Sbjct: 84 QIGDV-TRLMQYWNNIRCPSKSGQKGWKNAWETSGVCSDLTESAYFDTALALRDKINPLS 142
Query: 152 ALAEQGIKPDYQLYNTAFIKWAVNQKLGVTPGVQCRDGPFGKKQLYEIYLCVDKDAKSFI 211
L GIKPD+ LY+ IK + + +G +QC GPF K QLY+IY+CV +DAK+F+
Sbjct: 143 RLVSNGIKPDFGLYSVKKIKEVIEEGIGAPALIQCSKGPFNKFQLYQIYVCVAEDAKTFV 202
Query: 212 DCPV-LPNLSCPAEVLFHPFHTWMLNTTS 239
+CP +C ++LFHPF WML T S
Sbjct: 203 ECPSPRKPYTCGDDILFHPFKKWMLKTNS 231
>Os08g0434100 Similar to S-like ribonuclease (RNase PD2) (Fragment)
Length = 229
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 105/192 (54%), Gaps = 5/192 (2%)
Query: 30 FDFYYLILMWPGAYCTDSEYGCCVPKYGYPSEDFFVKSFMTFDSSENTAVVRCNSDNPFD 89
+DF++L+L WPG+YC D++ CC P+ G P+ DF + + + + C+ D+ FD
Sbjct: 27 YDFFFLVLQWPGSYC-DTKQSCCYPRSGKPAADFGIHGLWP-NRDDGSYPQNCDPDSEFD 84
Query: 90 INKLDSIENNLNHYWSNIKCPRTDGVNSWKSEWNSYGVCSGLK---ELDYFKAGLQLRKN 146
+K+ + ++ W + CP DG+ W EW +G C+ E YF+A L+LR
Sbjct: 85 PSKVSDLLGSMRSEWPTLACPSNDGIRFWAHEWEKHGTCAAAALGDEHGYFEAALRLRSR 144
Query: 147 ADVLSALAEQGIKPDYQLYNTAFIKWAVNQKLGVTPGVQCRDGPFGKKQLYEIYLCVDKD 206
VL+AL + G+ PD Y + IK A+ + +G P V+C G QLY++Y CVD
Sbjct: 145 LPVLAALRDGGVSPDGGYYTLSQIKGAIQRGVGAEPFVECNRDESGNSQLYQLYFCVDAA 204
Query: 207 AKSFIDCPVLPN 218
+ F+DCP P
Sbjct: 205 GERFVDCPASPG 216
>Os07g0630400 Ribonuclease T2 family protein
Length = 256
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 39/237 (16%)
Query: 30 FDFYYLILMWPGAYCTDSEYGCCVPKYGYPSEDFFVKSF--------------------- 68
FDF+YL+ WPG++C D++ GCC P G P+ +F +
Sbjct: 23 FDFFYLVQQWPGSFC-DTQAGCCFPDTGKPAAEFGIHGLWPNYAKCRPAAGAVADDDDGV 81
Query: 69 --MTFDSSENTAVVR------------CNSDNPFDINKLDSIENNLNHYWSNIKCPRTDG 114
M D AV R C+ N ++ + L+ W + C
Sbjct: 82 VEMVVDG--GAAVERHHRRRQKCWPEYCDDGNKLRPWEIKDLVAELDANWPTLSCKGGKS 139
Query: 115 VNSWKSEWNSYGVCSGLKELDYFKAGLQLRKNADVLSALAEQGIKP-DYQLYNTAFIKWA 173
W EW +G CSG+ + YF A L+L+K D+ + LA GI P D + Y+ I+ A
Sbjct: 140 FEFWSYEWKKHGTCSGMGQHGYFAAALELKKRHDLAAVLAGAGIVPSDDESYSLGSIRDA 199
Query: 174 VNQKLGVTPGVQCRDGPFGKKQLYEIYLCVDKDAKSFIDCPVLPNLSCPAEVLFHPF 230
+ G P ++C G+ QL+++Y CVD+ K +DC + C +V F
Sbjct: 200 IAAATGAVPNLECNRDAAGETQLFQVYQCVDRSGKKLVDCQLPMQGKCRDKVKLPTF 256
>Os07g0629900
Length = 260
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 30 FDFYYLILMWPGAYCTDSEYGCCVPK--------YG-YPSEDFFVKSFMTFDSSENTAVV 80
FDF YL WP +YC S + C V +G +PS + + M +
Sbjct: 27 FDFMYLAQQWPDSYC--STHKCLVKPPPPSHFTIHGLWPSYNKLIDGKMWLED------- 77
Query: 81 RCNSDNPFDINKLDSIENNLNHYWSNIKCPRTDGVNSWKSEWNSYGVCSGLKELDYFKAG 140
CN ++P D ++ +E L+ W ++K + W EW +G CS L + YF+A
Sbjct: 78 -CNKEDPLDPTQIQDLEKQLDQKWPSLK---QTNLEFWSLEWKKHGTCSNLGQHAYFEAA 133
Query: 141 LQLRKNADVLSALAEQGIKP-DYQLYNTAFIKWAVNQKLGVTPGVQCRDGPFGKKQLYEI 199
L L + ++ LA+ G+ P D + Y I A+ + G +C G L E+
Sbjct: 134 LALERLTNLTKILADGGVGPSDVKTYTFREISDALARGTGFRTYFKCSKNKAGDTLLSEV 193
Query: 200 YLCVDKDAKSFIDCPVLPNLSCP-AEVLFHPFHTWMLNTTSAANIV 244
CVD+ + I+C L C A+ + P +M++++++ N+
Sbjct: 194 RQCVDRYGEKLINCTALSFDYCDNADKIKMPQSGYMISSSTSYNLA 239
>Os07g0629300
Length = 238
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 21 AKTVNADSPFDFYYLILMWPGAYCTDSEYGCCV-PKYGYPSEDFFVKSFMTFDSSENTAV 79
A T + FDF Y + W +YC+ + + C P+ P +F ++ + S E
Sbjct: 21 ASTSAVEVKFDFMYFVQQWAPSYCSTAPHECEYEPRL--PPNNFTIRGL--WPSYEEWRP 76
Query: 80 VRCNSDNPFDINKLDSIENNLNHYWSNIKCPRTDGVNSWKSEWNSYGVCSGLKELDYFKA 139
CN + D ++ + LN W ++ T+ + W EW+ +G CS L + YF A
Sbjct: 77 EYCNISDRLDPGQIQDLVKPLNQSWPSLLRNETN-LELWSHEWSKHGTCSNLSQHGYFAA 135
Query: 140 GLQLR--KNADVLSALAEQGIKP-DYQLYNTAFIKWAVNQKLGVTPGVQCRDGP--FGKK 194
L L K ++ LA+ G+ P D + Y I A+ + G + ++C +G+
Sbjct: 136 ALALDKLKLTNLTKILADGGVVPSDEKTYTLGEISDALAKGTGFSTYLRCSQNELKYGET 195
Query: 195 QLYEIYLCVDKDAKSFIDC 213
LYE+ CVD+ + ++C
Sbjct: 196 LLYEVLQCVDRSGEKLVNC 214
>Os01g0897200 Similar to Ribonuclease 2 precursor (EC 3.1.27.1)
Length = 284
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 85/199 (42%), Gaps = 27/199 (13%)
Query: 30 FDFYYLILMWPGAYCTDSEY-----GCCVPKYGYPSEDFFVKSFM-TFDSSENTAVVRCN 83
FD++ L L WPG C + + GCC + P + F + +D A R
Sbjct: 47 FDYFALALQWPGTICASTRHCCAINGCCRSE---PLQTFTIHGLWPDYDDGTWPACCRHT 103
Query: 84 SDNPFDINKLDSIENNLNHYWSNIKCPRTDGVNS-----WKSEWNSYGVCSG---LKELD 135
S FD++K+ ++ L YW ++ C + S W E +G CS EL+
Sbjct: 104 S---FDMDKILPLKPTLEKYWPSLYCSSSSTCFSGKGPFWAHESEKHGTCSSPVVKDELE 160
Query: 136 YFKAGLQLRKNADVLSALAEQGIK-PDYQLYNTAFIKWAVNQKLGVTPGVQCRDGPFGKK 194
YF L L +V LA GI + + Y + A+ G +P + C+ G
Sbjct: 161 YFTTALDLYFKYNVTEMLASGGIHVSNGKQYALTDVIDAIKCAFGASPQIVCKKG----- 215
Query: 195 QLYEIYLCVDKDAKSFIDC 213
+ E+ LC DKD K +DC
Sbjct: 216 SVEELRLCFDKDLKP-LDC 233
>Os01g0897300 Ribonuclease T2 family protein
Length = 271
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 91/233 (39%), Gaps = 41/233 (17%)
Query: 1 MEQRKFLLCLILGLLATSGPAKTVNADSPFDFYYLILMWPGAYCTDSEY-----GCCV-- 53
ME+++ L + L L + V S FD+Y L L WPG C + + GCC
Sbjct: 1 MEEKRQRLVISLSALCLA-----VAVMSGFDYYVLALQWPGTVCRQTSHCCSSNGCCRSH 55
Query: 54 -----------PKYGYPSEDFFVKSFMTFDSSENTAVVRCNSDNPFDINKLDSIENNLNH 102
P+Y Y + TFD ++ A N I++L +I L
Sbjct: 56 PLKFFTIHGLWPQYSYGGWPSCCRP-TTFDGNKVAANHPSYLQNGILISRLKTI---LEE 111
Query: 103 YWSNIKCPRTDGVNS-----WKSEWNSYGVCSGLK---ELDYFKAGLQLRKNADVLSALA 154
YW ++ C W EW ++G C + E DYF L L +V AL
Sbjct: 112 YWPSLYCGSFSTCFGGKRPFWVHEWETHGTCGYPEIQDEYDYFSTALYLYSKYNVTKALK 171
Query: 155 EQGIKP-DYQLYNTAFIKWAVNQKLGVTPGVQCRDGPFGKKQLYEIYLCVDKD 206
+ I P + Y I A+ G P + C++G + E+ LC KD
Sbjct: 172 KAHIYPRGGRKYLVGHIVSAIEFSFGAMPSIVCKNG-----SVQELRLCFHKD 219
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,343,022
Number of extensions: 397749
Number of successful extensions: 915
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 906
Number of HSP's successfully gapped: 9
Length of query: 252
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 154
Effective length of database: 11,918,829
Effective search space: 1835499666
Effective search space used: 1835499666
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)