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Os08g0434100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to S-like ribonuclease (RNase PD2) (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0467) R2 : 0.712
β1 : -5.13 (0.169) R2dD : 0.602 R2D : 0.471
β2 : 1.15 (0.116) R2dC : 0.0611 R2C : 0.0215
β3 : -1.68 (0.212) R2dE : 0.0437 R2E : -0.0115
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.45 (0.102) R2dN8 : 0.182 R2N8 : -0.0127
σ : 0.865
deviance : 344.66
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_____
C
peak time of C : 8.49
E
wheather : humidity
threshold : 84.23
memory length : 857
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 16.6
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
334.83 0.86 11.3 -5.36 1.15 -1.65 0.692 2.77 -1.48 7.81 84 848 15.2 --
345.05 0.865 11.3 -5.2 1.15 -1.65 0.539 -- -1.47 8.09 85 856 16.3 --
336.08 0.854 11.3 -5.34 1.15 -1.65 -- 2.62 -1.48 7.98 84 853 15.4 --
344.66 0.865 11.3 -5.13 1.15 -1.68 -- -- -1.45 8.49 84.23 857 16.6 --
406.46 0.939 11.3 -5.33 -- -1.8 -- 2.56 -1.48 -- 84.16 850 15.9 --
392.72 0.929 11.3 -5.13 1.19 -- 0.242 -- -1.24 8.17 -- -- -- --
392.89 0.928 11.3 -5.12 1.19 -- -- -- -1.24 8.22 -- -- -- --
415.32 0.949 11.3 -5.11 -- -1.82 -- -- -1.45 -- 84.26 850 16 --
1026.13 1.49 11.2 -- 1.13 -1.63 -- -- -0.854 8.28 86 1267 16 --
470.96 1.01 11.3 -5.11 -- -- -- -- -1.23 -- -- -- -- --
1083.98 1.54 11.1 -- 1.17 -- -- -- -0.672 8.54 -- -- -- --
1096.56 1.54 11.2 -- -- -1.85 -- -- -0.948 -- 86.46 1264 15.5 --
1160.23 1.59 11.2 -- -- -- -- -- -0.662 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 312.47 wind 1 14400 < th dose dependent rect. 1 2
3 315.46 wind 1 14400 < th dose dependent rect. 1 5
12 325.43 wind 1 43200 < th dose dependent rect. 5 2
15 326.75 wind 1 14400 < th dose independent rect. 1 6
22 327.82 wind 1 14400 < th dose independent rect. 1 2
31 329.51 wind 1 14400 > th dose independent rect. 1 6
52 331.20 humidity 60 43200 > th dose independent rect. 20 14
62 331.69 wind 1 14400 > th dose independent rect. 5 1
64 331.72 wind 1 14400 < th dose independent rect. 5 2
70 332.22 radiation 20 43200 > th dose independent rect. 15 2
85 332.42 humidity 70 43200 < th dose independent rect. 22 10
86 332.47 humidity 60 43200 < th dose independent rect. 20 14
93 333.11 humidity 70 43200 > th dose independent rect. 22 10
107 334.07 wind 1 14400 > th dose independent rect. 1 2
109 334.15 humidity 70 43200 < th dose dependent rect. 21 12
117 334.49 radiation 10 43200 > th dose dependent rect. 15 1
152 335.07 humidity 60 43200 > th dose independent rect. 6 4
158 335.22 radiation 40 43200 > th dose independent rect. 7 1
174 335.22 radiation 40 43200 > th dose dependent rect. 7 1
192 335.34 humidity 60 43200 < th dose independent rect. 9 1
207 335.62 humidity 60 43200 > th dose independent rect. 9 1
209 335.66 radiation 40 43200 < th dose dependent rect. 15 1
270 336.50 atmosphere 995 43200 < th dose dependent sin 12 NA
271 336.58 humidity 70 43200 < th dose independent rect. 7 1
272 336.59 humidity 70 43200 < th dose dependent rect. 7 1
274 336.61 atmosphere 995 43200 > th dose independent sin 9 NA
285 337.01 wind 1 43200 < th dose dependent sin 10 NA
301 337.28 atmosphere 995 43200 < th dose independent sin 9 NA
327 337.87 atmosphere 995 43200 < th dose independent rect. 18 15
342 337.94 atmosphere 995 43200 > th dose independent rect. 20 13
344 337.97 atmosphere 995 43200 > th dose independent rect. 22 11
354 338.21 atmosphere 995 43200 < th dose independent rect. 21 12
363 338.26 radiation 40 43200 < th dose dependent rect. 15 12
371 338.29 radiation 40 43200 < th dose dependent rect. 15 8
387 338.58 atmosphere 995 43200 > th dose independent rect. 3 5
402 338.64 atmosphere 995 43200 > th dose independent rect. 18 16
410 338.79 atmosphere 995 43200 < th dose independent rect. 2 6
412 338.80 atmosphere 995 43200 < th dose dependent rect. 13 17
418 338.84 atmosphere 995 43200 < th dose dependent rect. 2 6
457 339.30 wind 9 43200 > th dose independent rect. 11 1
460 339.34 radiation 10 4320 < th dose dependent rect. 16 2
487 339.51 radiation 20 43200 < th dose independent rect. 15 1
611 340.46 wind 1 43200 < th dose dependent rect. 12 1
642 340.78 humidity 70 1440 > th dose dependent rect. 11 3
653 340.94 radiation 20 43200 > th dose independent sin 14 NA
669 341.01 radiation 10 4320 < th dose dependent rect. 16 12
674 341.04 wind 1 43200 < th dose dependent rect. 8 1
684 341.14 radiation 10 4320 < th dose dependent rect. 16 4
687 341.17 radiation 10 4320 < th dose dependent rect. 16 7
723 341.34 radiation 10 1440 < th dose dependent rect. 11 6
823 341.51 wind 9 43200 < th dose independent rect. 11 1
864 341.69 radiation 10 1440 < th dose dependent rect. 13 1
869 341.71 humidity 50 43200 > th dose independent rect. 14 2
906 341.81 atmosphere 995 43200 < th dose dependent rect. 18 14
926 341.97 humidity 80 1440 > th dose independent rect. 10 5
959 342.28 humidity 50 43200 > th dose independent rect. 13 4
977 342.45 temperature 20 4320 > th dose independent rect. 3 1
981 342.49 temperature 20 4320 < th dose independent rect. 3 1