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Os09g0537700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ribonuclease T2 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.129) R2 : 0.674
β1 : -7.2 (0.483) R2dD : 0.249 R2D : 0.363
β2 : -- (--) R2dC : -- R2C : --
β3 : 8.24 (0.58) R2dE : 0.267 R2E : 0.253
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 27.4 (1.8) R2dD*E : 0.298 R2D*E : -0.134
γ1 : 0.0036 (0.243) R2dN8 : -9.03e-07 R2N8 : -0.0533
σ : 2.01
deviance : 1868.69
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C
peak time of C : --
E
wheather : wind
threshold : 6.159
memory length : 10427
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 11.5
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
1849.66 2.02 11.8 -7.71 0.435 7.66 -2.39 26.7 -0.00907 21.1 5.615 10447 12 --
2536.87 2.35 10.8 -6.34 0.215 7.53 1.31 -- 0.826 8.92 0.6197 20672 12.7 --
1860.52 2.01 11.8 -7.48 0.472 7.94 -- 27.2 0.0171 20.4 5.946 10386 11.7 --
2520.22 2.34 10.8 -5.83 0.575 8.75 -- -- 0.865 11.5 0.5293 20902 14.1 --
1868.69 2.01 11.8 -7.2 -- 8.24 -- 27.4 0.0036 -- 6.159 10427 11.5 --
3097.75 2.61 10.8 -9.47 0.442 -- -2.17 -- 0.855 22 -- -- -- --
3114.13 2.61 10.8 -9.38 0.506 -- -- -- 0.865 20.5 -- -- -- --
2535.3 2.35 10.8 -5.79 -- 8.52 -- -- 0.899 -- 0.8 20897 14.7 --
3076.09 2.58 10.8 -- 1.03 14.7 -- -- 1.3 12.7 0.5376 21154 15.2 --
3128.43 2.61 10.8 -9.38 -- -- -- -- 0.86 -- -- -- -- --
5430.74 3.45 10.6 -- 0.573 -- -- -- 1.91 19.2 -- -- -- --
3072.82 2.58 10.6 -- -- 14.7 -- -- 1.74 -- 0.7847 21593 15.8 --
5448.13 3.45 10.6 -- -- -- -- -- 1.9 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 1752.98 humidity 80 14400 > th dose independent rect. 21 2
3 1773.94 humidity 80 14400 < th dose independent rect. 21 2
5 1802.03 wind 9 14400 > th dose dependent rect. 13 8
7 1816.92 wind 9 14400 > th dose dependent rect. 13 16
21 1830.73 wind 7 14400 > th dose dependent rect. 14 2
24 1835.61 wind 9 14400 > th dose dependent sin 17 NA
30 1847.72 wind 9 14400 > th dose independent rect. 13 8
35 1850.23 wind 7 14400 > th dose independent rect. 14 2
46 1858.25 wind 9 14400 < th dose independent rect. 13 8
51 1863.74 wind 7 14400 > th dose dependent rect. 13 5
72 1869.91 wind 9 14400 > th dose independent rect. 13 16
73 1871.10 wind 7 14400 < th dose independent rect. 14 2
99 1879.82 wind 9 14400 > th dose independent sin 16 NA
105 1884.15 wind 9 14400 < th dose independent rect. 13 15
107 1884.74 wind 1 43200 < th dose independent rect. 2 3
111 1886.44 wind 9 14400 < th dose independent rect. 13 18
117 1888.44 wind 9 14400 < th dose independent rect. 13 20
128 1895.72 humidity 80 43200 < th dose dependent rect. 10 1
142 1902.03 radiation 10 43200 < th dose independent rect. 12 3
147 1903.47 wind 9 14400 > th dose dependent rect. 17 22
148 1903.53 radiation 30 43200 < th dose dependent rect. 13 1
160 1908.37 radiation 10 43200 < th dose independent rect. 8 22
161 1909.29 radiation 10 43200 < th dose independent rect. 8 8
167 1909.79 radiation 10 43200 < th dose independent rect. 8 12
171 1909.87 radiation 10 43200 < th dose independent rect. 8 16
173 1909.88 radiation 10 43200 < th dose independent rect. 8 19
185 1912.78 wind 9 14400 > th dose dependent rect. 4 17
194 1914.63 radiation 10 43200 < th dose independent sin 21 NA
200 1915.88 radiation 30 43200 < th dose independent rect. 9 1
203 1916.84 radiation 10 43200 < th dose independent rect. 10 5
225 1919.92 wind 9 14400 < th dose independent sin 16 NA
227 1920.28 radiation 10 43200 < th dose independent rect. 13 20
236 1921.63 radiation 10 43200 < th dose independent rect. 12 8
243 1921.71 radiation 10 43200 < th dose independent rect. 12 17
247 1921.77 radiation 10 43200 < th dose independent rect. 12 12
260 1921.96 radiation 1 43200 > th dose dependent rect. 13 1
290 1924.36 radiation 40 43200 < th dose independent rect. 13 1
302 1925.96 radiation 30 43200 > th dose independent rect. 16 18
323 1927.14 radiation 30 43200 > th dose independent rect. 9 1
360 1928.37 radiation 10 43200 < th dose independent rect. 1 16
362 1928.40 radiation 10 43200 < th dose independent rect. 23 18
363 1928.41 radiation 10 43200 < th dose independent rect. 4 13
370 1928.45 radiation 10 43200 < th dose independent rect. 19 22
434 1930.65 wind 1 43200 > th dose independent rect. 2 3
460 1931.04 radiation 10 43200 < th dose independent rect. 1 23
478 1931.08 radiation 10 43200 < th dose independent no NA NA
503 1931.46 wind 9 14400 > th dose dependent rect. 20 23
515 1932.30 humidity 70 43200 < th dose independent rect. 16 1
550 1934.66 radiation 30 43200 > th dose independent rect. 7 3
595 1937.88 radiation 10 43200 > th dose independent rect. 17 13
601 1938.62 humidity 60 43200 > th dose independent rect. 11 2
659 1940.41 humidity 80 14400 < th dose dependent rect. 21 1
681 1942.17 radiation 1 43200 > th dose dependent rect. 13 17
694 1943.06 radiation 1 43200 > th dose dependent rect. 13 4
696 1943.08 radiation 30 43200 < th dose dependent rect. 13 16
707 1943.73 radiation 30 43200 < th dose dependent rect. 13 7
713 1943.89 radiation 30 43200 < th dose dependent rect. 13 11
720 1944.06 radiation 1 43200 > th dose dependent rect. 13 6
731 1944.26 wind 9 14400 > th dose dependent rect. 6 23
749 1944.61 wind 9 14400 > th dose dependent no NA NA
752 1944.66 radiation 30 43200 < th dose independent rect. 15 20
831 1948.65 radiation 40 43200 > th dose dependent sin 13 NA
833 1948.85 radiation 40 43200 > th dose dependent rect. 12 1
839 1949.02 radiation 40 43200 > th dose dependent rect. 12 21
851 1949.57 wind 1 43200 < th dose dependent rect. 2 3
884 1950.23 radiation 20 43200 > th dose independent rect. 16 15
897 1950.73 radiation 1 43200 > th dose dependent sin 15 NA
899 1950.80 radiation 40 43200 > th dose independent rect. 12 1
908 1951.31 radiation 1 43200 > th dose dependent rect. 15 2
913 1951.53 humidity 60 43200 > th dose independent rect. 10 4
934 1952.22 humidity 70 43200 < th dose independent rect. 10 1
993 1953.93 radiation 40 43200 > th dose dependent rect. 12 4