BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0451800 Os09g0451800|AK109302
(231 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0451800 Protein of unknown function DUF1644 family pro... 482 e-137
Os02g0770600 Protein of unknown function DUF1644 family pro... 193 1e-49
Os02g0566500 Protein of unknown function DUF1644 family pro... 177 5e-45
Os04g0448100 Protein of unknown function DUF1644 family pro... 160 7e-40
Os01g0612600 Protein of unknown function DUF1644 family pro... 142 1e-34
Os06g0693700 Protein of unknown function DUF1644 family pro... 130 7e-31
Os02g0150900 Protein of unknown function DUF1644 family pro... 130 1e-30
AK065480 65 5e-11
>Os09g0451800 Protein of unknown function DUF1644 family protein
Length = 231
Score = 482 bits (1241), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/231 (100%), Positives = 231/231 (100%)
Query: 1 MTKSIRGKKCSSRQLRSHNRRLFSQCNFKRVANKELAATEKCAWKDSICPVCLECPHNAV 60
MTKSIRGKKCSSRQLRSHNRRLFSQCNFKRVANKELAATEKCAWKDSICPVCLECPHNAV
Sbjct: 1 MTKSIRGKKCSSRQLRSHNRRLFSQCNFKRVANKELAATEKCAWKDSICPVCLECPHNAV 60
Query: 61 LLLCSSHDKGCRPYICATNYHHSNCLDQLIDSRRSSKDCEDLDSIELTCPLCRGEVKGYT 120
LLLCSSHDKGCRPYICATNYHHSNCLDQLIDSRRSSKDCEDLDSIELTCPLCRGEVKGYT
Sbjct: 61 LLLCSSHDKGCRPYICATNYHHSNCLDQLIDSRRSSKDCEDLDSIELTCPLCRGEVKGYT 120
Query: 121 LVEPAREQLNQNKRSCMQDGCSYMGSYGELCKHVRKKHPSVKPHSVDPVHTYRWRRLLFR 180
LVEPAREQLNQNKRSCMQDGCSYMGSYGELCKHVRKKHPSVKPHSVDPVHTYRWRRLLFR
Sbjct: 121 LVEPAREQLNQNKRSCMQDGCSYMGSYGELCKHVRKKHPSVKPHSVDPVHTYRWRRLLFR 180
Query: 181 SSLQDMICATSSPMVRRVLYVMLQFEELMASVWHEGPHGAMQINEMNLADP 231
SSLQDMICATSSPMVRRVLYVMLQFEELMASVWHEGPHGAMQINEMNLADP
Sbjct: 181 SSLQDMICATSSPMVRRVLYVMLQFEELMASVWHEGPHGAMQINEMNLADP 231
>Os02g0770600 Protein of unknown function DUF1644 family protein
Length = 345
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 31/227 (13%)
Query: 1 MTKSIRGKKCSSRQLRS-------HNRRLFSQCNFKRVANKELAATEKCAWKDSICPVCL 53
M +S R ++ +RQLRS + + + N K K L A +K W+D+ C VC+
Sbjct: 1 MARSARARRHVARQLRSAPYPIPSYRWKAMKESNRK----KTLPAAQKMDWEDANCSVCM 56
Query: 54 ECPHNAVLLLCSSHDKGCRPYICATNYHHSNCLDQLIDSRRSSKDCEDL----------- 102
E PHNAVLLLCSSHDKGCRPY+C T++ HSNCLDQ + E+L
Sbjct: 57 EYPHNAVLLLCSSHDKGCRPYMCGTSHRHSNCLDQFKKAYTKGALLEELPANTVGTNLDS 116
Query: 103 ---------DSIELTCPLCRGEVKGYTLVEPAREQLNQNKRSCMQDGCSYMGSYGELCKH 153
+S++L CPLCRG+VKG+T+VEPAR LN +R+CMQDGCS++G+Y EL KH
Sbjct: 117 TPLIAGEKNESVDLACPLCRGKVKGWTIVEPARSYLNGKRRTCMQDGCSFVGTYKELRKH 176
Query: 154 VRKKHPSVKPHSVDPVHTYRWRRLLFRSSLQDMICATSSPMVRRVLY 200
V+ +HP KP VDP+ +WR L QD + ++ M R +++
Sbjct: 177 VKSEHPLAKPREVDPILEQKWRLLEIERERQDALSTITATMGRAIVF 223
>Os02g0566500 Protein of unknown function DUF1644 family protein
Length = 362
Score = 177 bits (450), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 108/175 (61%), Gaps = 21/175 (12%)
Query: 39 TEKCAWKDSICPVCLECPHNAVLLLCSSHDKGCRPYICATNYHHSNCLDQLIDSRRSSKD 98
+EK WK + CPVCLE PH+AVLLLC+SH KGCRPY+C TN+ HSNCL+ ++ K
Sbjct: 44 SEKKEWKGASCPVCLEHPHDAVLLLCTSHHKGCRPYMCGTNHQHSNCLEHFKEAYAKEKL 103
Query: 99 CEDLD---------------------SIELTCPLCRGEVKGYTLVEPAREQLNQNKRSCM 137
+ ++EL CPLCRG+VKG+T+VEPAR+ LN+ KR+CM
Sbjct: 104 AHSVLIESSPGLSLSLNSQPASKQQCAMELACPLCRGDVKGWTVVEPARQYLNRKKRACM 163
Query: 138 QDGCSYMGSYGELCKHVRKKHPSVKPHSVDPVHTYRWRRLLFRSSLQDMICATSS 192
DGCS++GSY ELCKHV KHPS KP VDP H W++ QD I S
Sbjct: 164 HDGCSFIGSYKELCKHVNSKHPSAKPREVDPAHADEWKKFECERERQDAISTIRS 218
>Os04g0448100 Protein of unknown function DUF1644 family protein
Length = 267
Score = 160 bits (405), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 99/161 (61%), Gaps = 11/161 (6%)
Query: 38 ATEKCAWKDSICPVCLECPHNAVLLLCSSHDKGCRPYICATNYHHSNCLDQLIDSRRSSK 97
+EK WK + C +CLE PH AVLLLCSSH KGCRPY+C TN HSNCL+Q ++ K
Sbjct: 41 TSEKKDWKRATCSICLEHPHKAVLLLCSSHSKGCRPYMCDTNRQHSNCLEQFKNAYSRGK 100
Query: 98 DCEDLDS-----------IELTCPLCRGEVKGYTLVEPAREQLNQNKRSCMQDGCSYMGS 146
+L +EL CP+CRG+VKG+T+VEPAR LN+ +R+CM +GCS+ GS
Sbjct: 101 PACELSGAVAQASKKPQEMELVCPICRGDVKGWTVVEPARRFLNRKRRTCMHEGCSFGGS 160
Query: 147 YGELCKHVRKKHPSVKPHSVDPVHTYRWRRLLFRSSLQDMI 187
Y +L HVR HPS P +D W+ L + QD I
Sbjct: 161 YRKLRNHVRSNHPSSNPREIDSASLAEWKELEYEKDRQDAI 201
>Os01g0612600 Protein of unknown function DUF1644 family protein
Length = 326
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 100/166 (60%), Gaps = 12/166 (7%)
Query: 44 WKDSICPVCLECPHNAVLLLCSSHDKGCRPYICATNYHHSNCLDQLID-SRRSSKD---- 98
W+D CPVC++ PHNAVLL+CSSH+KGCRP++C T+Y HSNC DQ S+ SSKD
Sbjct: 51 WEDVRCPVCMDHPHNAVLLVCSSHEKGCRPFMCDTSYRHSNCFDQYRKASKESSKDSGAS 110
Query: 99 -------CEDLDSIELTCPLCRGEVKGYTLVEPAREQLNQNKRSCMQDGCSYMGSYGELC 151
E I+L+CPLCRG V +T AR+ LN R+C ++ C + G+YG+L
Sbjct: 111 AAAAPECSECQQPIKLSCPLCRGPVSHWTKDYDARKYLNVKVRACTKESCEFRGAYGQLR 170
Query: 152 KHVRKKHPSVKPHSVDPVHTYRWRRLLFRSSLQDMICATSSPMVRR 197
+H R+ HP+V+P VDP W R+ + L D+ S + R
Sbjct: 171 RHARENHPTVRPTQVDPERQRDWHRMEQQRDLGDLFSMLRSGLSAR 216
>Os06g0693700 Protein of unknown function DUF1644 family protein
Length = 316
Score = 130 bits (327), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 97/164 (59%), Gaps = 16/164 (9%)
Query: 40 EKCAWKDSICPVCLECPHNAVLLLCSSHDKGCRPYICATNYHHSNCLDQL-------IDS 92
+K +D CP+CL+ PHNAVLL C+S++KGCRP++C T+ SNCL++ +
Sbjct: 24 DKSWTEDVTCPICLDYPHNAVLLRCTSYEKGCRPFVCDTDQTRSNCLERFKGAYELPANM 83
Query: 93 RRSSKDCEDLDSIEL---------TCPLCRGEVKGYTLVEPAREQLNQNKRSCMQDGCSY 143
+ S+ LDSI + +CPLCRG+V G+ ++ AR LNQ KR C +D CS+
Sbjct: 84 KVSTIAVAPLDSIHIVAPNVNNRPSCPLCRGDVIGWIVIGEARLHLNQKKRCCEEDCCSF 143
Query: 144 MGSYGELCKHVRKKHPSVKPHSVDPVHTYRWRRLLFRSSLQDMI 187
+G++ EL KH ++KHP +P +DP W S + D++
Sbjct: 144 VGNFNELQKHTQQKHPDSRPSEIDPARQVDWENFQQSSDIVDVL 187
>Os02g0150900 Protein of unknown function DUF1644 family protein
Length = 320
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 98/167 (58%), Gaps = 16/167 (9%)
Query: 37 AATEKCAWKDSICPVCLECPHNAVLLLCSSHDKGCRPYICATNYHHSNCLDQL------- 89
A +K +D CP+CL+ PHNAVLL C+S++KGCRP+IC T+ SNCL++
Sbjct: 20 AKLDKSWMEDITCPICLDFPHNAVLLRCTSYEKGCRPFICDTDQSRSNCLERFKGAHGLP 79
Query: 90 IDSRRSSKDCEDLDSIEL---------TCPLCRGEVKGYTLVEPAREQLNQNKRSCMQDG 140
+ + S + LDSI + CPLCRG+V G+ +++ AR LNQ KR C +
Sbjct: 80 TNMKVPSFNGAPLDSIHIISSNTTDRPACPLCRGDVIGWVVIDEARLHLNQKKRCCEESC 139
Query: 141 CSYMGSYGELCKHVRKKHPSVKPHSVDPVHTYRWRRLLFRSSLQDMI 187
CSY+G++ EL KH ++KHP+ +P +DP W S + D++
Sbjct: 140 CSYVGNFHELQKHTQQKHPNSRPSEIDPARRVDWENFQQSSDIIDVL 186
>AK065480
Length = 112
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 45 KDSICPVCLECPHNAVLLLCSSHDKGCRPYICATNYHHSNCLDQL 89
+D CP+CL+ PHNAVLL C+S++KGCRP++C T+ SNCL++
Sbjct: 29 EDVTCPICLDYPHNAVLLRCTSYEKGCRPFVCDTDQTRSNCLERF 73
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.133 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,106,826
Number of extensions: 321736
Number of successful extensions: 797
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 791
Number of HSP's successfully gapped: 8
Length of query: 231
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 133
Effective length of database: 11,918,829
Effective search space: 1585204257
Effective search space used: 1585204257
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 154 (63.9 bits)