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Os09g0451800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1644 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.019) R2 : 0.0352
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.163 (0.04) R2dN8 : 0.0454 R2N8 : 0.0352
σ : 0.358
deviance : 58.7
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.72 0.252 10.9 0.65 0.551 0.395 0.31 0.0519 0.314 19 27.21 1310 -- --
28.72 0.25 10.9 0.654 0.553 0.394 0.308 -- 0.316 19 27.2 1306 -- --
28.97 0.251 10.9 0.649 0.551 0.396 -- 0.0502 0.314 19 27.2 1307 -- --
28.96 0.251 10.9 0.651 0.554 0.393 -- -- 0.316 19 27.2 1307 -- --
44.58 0.311 10.9 0.617 -- 0.382 -- 0.0451 0.3 -- 27.2 1386 -- --
34.39 0.275 10.9 0.589 0.546 -- 0.245 -- 0.237 18.5 -- -- -- --
34.54 0.275 10.9 0.585 0.547 -- -- -- 0.238 18.5 -- -- -- --
44.58 0.311 10.8 0.635 -- 0.377 -- -- 0.305 -- 27.21 1386 -- --
38.73 0.29 10.9 -- 0.558 0.395 -- -- 0.303 18.9 37.99 8464 -- --
50.08 0.331 10.9 0.572 -- -- -- -- 0.226 -- -- -- -- --
43.57 0.309 10.9 -- 0.539 -- -- -- 0.173 18.5 -- -- -- --
53.09 0.339 10.9 -- -- 0.372 -- -- 0.275 -- 39 17166 -- --
58.7 0.358 10.9 -- -- -- -- -- 0.163 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.70 precipitation 0.1 270 < th dose independent rect. 2 4
2 26.70 precipitation 0.1 270 < th dose dependent rect. 2 4
3 26.76 atmosphere 995.0 270 > th dose independent rect. 6 20
4 26.80 precipitation 0.1 270 < th dose independent rect. 1 6
5 26.80 precipitation 0.1 270 < th dose dependent rect. 1 6
6 26.86 wind 7.0 270 < th dose independent rect. 2 4
7 26.88 atmosphere 995.0 270 > th dose independent rect. 7 18
8 26.89 radiation 1.0 10 < th dose dependent sin 12 NA
9 26.91 wind 9.0 270 < th dose independent rect. 6 20
11 26.92 temperature 10.0 270 > th dose independent rect. 2 4
13 26.92 temperature 30.0 270 < th dose independent rect. 2 4
14 26.92 humidity 50.0 270 > th dose independent rect. 2 4
17 26.92 atmosphere 995.0 270 > th dose independent rect. 2 4
18 26.92 atmosphere 1015.0 270 < th dose independent rect. 2 4
19 26.92 radiation 20.0 270 < th dose independent rect. 2 4
22 26.92 temperature 10.0 270 > th dose independent rect. 6 20
25 26.94 wind 7.0 270 < th dose independent rect. 1 6
26 26.96 precipitation 0.1 270 < th dose independent rect. 3 2
27 26.96 precipitation 0.1 270 < th dose independent rect. 2 15
28 26.96 precipitation 0.1 270 < th dose dependent rect. 3 2
29 26.96 precipitation 0.1 270 < th dose dependent rect. 2 15
30 26.97 atmosphere 995.0 270 > th dose independent rect. 17 9
31 26.97 wind 9.0 270 < th dose independent rect. 7 18
32 26.98 radiation 40.0 270 < th dose dependent rect. 2 4
33 27.00 radiation 20.0 270 < th dose independent rect. 1 6
34 27.01 precipitation 0.1 270 < th dose independent rect. 12 18
36 27.01 precipitation 0.1 270 < th dose dependent rect. 12 18
38 27.02 temperature 10.0 270 > th dose independent rect. 1 6
40 27.02 temperature 30.0 270 < th dose independent rect. 1 6
41 27.02 humidity 50.0 270 > th dose independent rect. 1 6
44 27.02 atmosphere 995.0 270 > th dose independent rect. 1 6
45 27.02 atmosphere 1015.0 270 < th dose independent rect. 1 6
48 27.02 temperature 10.0 270 > th dose independent rect. 7 18
54 27.05 radiation 40.0 270 < th dose dependent rect. 1 6
61 27.13 temperature 10.0 270 > th dose independent rect. 6 6
62 27.13 atmosphere 995.0 270 > th dose independent rect. 6 6
63 27.13 atmosphere 1015.0 270 < th dose independent rect. 6 6
64 27.13 temperature 10.0 270 > th dose independent rect. 12 18
66 27.13 wind 9.0 270 < th dose dependent rect. 2 4
68 27.16 precipitation 0.1 270 < th dose independent rect. 6 6
69 27.16 temperature 15.0 270 > th dose independent rect. 2 15
70 27.16 precipitation 0.1 270 < th dose dependent rect. 6 6
75 27.18 wind 9.0 270 < th dose independent rect. 6 6
78 27.19 precipitation 0.1 270 < th dose independent rect. 6 20
79 27.19 precipitation 0.1 270 < th dose dependent rect. 6 20
85 27.22 wind 7.0 270 < th dose independent rect. 3 2
88 27.23 radiation 1.0 10 < th dose independent sin 12 NA
104 27.25 temperature 10.0 270 > th dose independent rect. 3 2
106 27.25 temperature 30.0 270 < th dose independent rect. 3 2
107 27.25 humidity 50.0 270 > th dose independent rect. 3 2
110 27.25 atmosphere 995.0 270 > th dose independent rect. 3 2
111 27.25 atmosphere 1010.0 270 < th dose independent rect. 3 2
113 27.25 radiation 20.0 270 < th dose independent rect. 3 2
116 27.25 wind 9.0 270 < th dose independent rect. 17 9
117 27.25 temperature 10.0 270 > th dose independent rect. 5 22
118 27.25 radiation 40.0 270 < th dose dependent rect. 3 2
119 27.26 humidity 50.0 270 > th dose independent rect. 6 6
120 27.26 radiation 20.0 270 < th dose dependent rect. 3 2
123 27.27 precipitation 0.1 270 < th dose independent rect. 7 18
124 27.27 radiation 1.0 270 < th dose dependent rect. 3 2
125 27.27 precipitation 0.1 270 < th dose dependent rect. 7 18
126 27.28 radiation 1.0 270 < th dose independent rect. 3 2
131 27.30 temperature 10.0 270 > th dose independent rect. 17 9
132 27.30 radiation 20.0 270 < th dose independent rect. 17 9
136 27.30 atmosphere 1015.0 270 < th dose independent rect. 2 15
137 27.30 wind 9.0 270 < th dose independent rect. 12 18
154 27.32 radiation 1.0 10 > th dose independent sin 12 NA
156 27.32 humidity 50.0 270 > th dose dependent rect. 2 4
161 27.33 humidity 50.0 30 > th dose dependent rect. 18 10
166 27.36 wind 9.0 270 < th dose dependent rect. 1 6
171 27.37 radiation 40.0 270 < th dose dependent rect. 17 9
198 27.48 wind 9.0 270 < th dose independent rect. 2 15
199 27.48 radiation 40.0 270 < th dose independent rect. 7 18
207 27.51 humidity 50.0 270 > th dose dependent rect. 3 2
211 27.52 radiation 40.0 270 < th dose dependent rect. 7 19
212 27.53 precipitation 0.1 270 < th dose independent rect. 17 9
213 27.53 wind 1.0 270 > th dose independent rect. 12 18
214 27.53 precipitation 0.1 270 < th dose dependent rect. 17 9
216 27.55 humidity 50.0 270 > th dose independent rect. 17 9
226 27.57 radiation 1.0 270 > th dose independent rect. 6 6
229 27.57 humidity 50.0 270 > th dose dependent rect. 1 6
256 27.60 wind 9.0 270 < th dose dependent rect. 7 18
288 27.69 radiation 1.0 10 > th dose independent rect. 14 18
291 27.69 humidity 50.0 270 > th dose dependent rect. 17 9
305 27.72 wind 1.0 270 > th dose independent rect. 1 5
323 27.76 wind 9.0 270 < th dose dependent rect. 6 20
332 27.79 temperature 30.0 270 < th dose dependent rect. 3 2
345 27.80 precipitation 0.1 10 < th dose independent rect. 14 19
347 27.80 wind 9.0 10 < th dose dependent rect. 4 5
349 27.80 precipitation 0.1 10 < th dose dependent rect. 14 19
358 27.82 atmosphere 995.0 10 > th dose independent rect. 9 19
362 27.83 wind 1.0 270 > th dose independent rect. 6 6
370 27.83 temperature 10.0 270 > th dose dependent rect. 2 4
392 27.87 atmosphere 995.0 270 > th dose dependent rect. 2 4
403 27.89 wind 7.0 10 < th dose independent rect. 4 5
405 27.89 wind 9.0 270 < th dose dependent rect. 7 5
410 27.90 precipitation 0.1 10 < th dose independent rect. 4 5
422 27.90 precipitation 0.1 10 < th dose dependent rect. 4 5
471 27.94 temperature 10.0 10 > th dose independent rect. 4 5
475 27.94 temperature 10.0 10 > th dose independent rect. 9 5
477 27.94 temperature 30.0 10 < th dose independent rect. 4 5
479 27.94 humidity 50.0 10 > th dose independent rect. 4 5
483 27.94 atmosphere 995.0 10 > th dose independent rect. 4 5
485 27.94 atmosphere 995.0 10 > th dose independent rect. 9 5
486 27.94 atmosphere 1015.0 10 < th dose independent rect. 4 5
488 27.94 atmosphere 1015.0 10 < th dose independent rect. 9 5
489 27.94 precipitation 0.1 10 < th dose independent rect. 9 5
493 27.94 atmosphere 1015.0 270 < th dose independent rect. 7 18
494 27.94 temperature 10.0 10 > th dose independent rect. 9 19
496 27.94 temperature 10.0 10 > th dose independent rect. 14 19
500 27.94 precipitation 0.1 10 < th dose dependent rect. 9 5
501 27.94 wind 9.0 270 < th dose dependent rect. 6 7
544 27.97 humidity 50.0 270 > th dose dependent rect. 7 18
546 27.98 radiation 40.0 270 < th dose independent rect. 7 6
569 28.00 radiation 1.0 10 > th dose independent rect. 9 5
575 28.00 humidity 50.0 270 > th dose dependent rect. 6 20
595 28.02 atmosphere 1015.0 270 < th dose independent rect. 12 18
621 28.03 wind 9.0 10 < th dose independent rect. 9 19
632 28.04 humidity 50.0 270 > th dose independent rect. 6 20
633 28.04 humidity 50.0 30 > th dose dependent rect. 4 5
660 28.09 temperature 10.0 1440 > th dose independent rect. 10 5
669 28.09 temperature 10.0 1440 > th dose independent rect. 15 19
690 28.11 temperature 10.0 270 > th dose dependent rect. 18 8
694 28.12 radiation 1.0 30 > th dose independent rect. 12 21
702 28.13 radiation 40.0 10 < th dose independent rect. 14 19
725 28.14 wind 9.0 10 < th dose independent rect. 9 5
744 28.14 humidity 50.0 270 > th dose independent rect. 7 18
760 28.15 radiation 40.0 90 < th dose independent rect. 14 18
765 28.15 temperature 30.0 270 < th dose dependent rect. 1 5
766 28.15 wind 9.0 270 < th dose dependent rect. 17 8
816 28.18 atmosphere 995.0 270 > th dose dependent rect. 3 2
842 28.21 temperature 15.0 90 > th dose independent rect. 4 14
889 28.24 temperature 30.0 30 < th dose independent rect. 18 10
933 28.26 atmosphere 995.0 270 > th dose independent rect. 12 18
943 28.27 temperature 10.0 270 > th dose dependent rect. 1 6
946 28.28 humidity 50.0 270 > th dose independent rect. 13 17
962 28.30 humidity 50.0 10 > th dose independent rect. 14 19
979 28.32 wind 7.0 270 < th dose independent rect. 8 2
986 28.32 atmosphere 995.0 270 > th dose independent rect. 2 15
993 28.33 temperature 10.0 270 > th dose independent rect. 8 2
994 28.33 humidity 50.0 270 > th dose independent rect. 8 2
995 28.33 atmosphere 995.0 270 > th dose independent rect. 8 2
996 28.33 atmosphere 1015.0 270 < th dose independent rect. 8 2