Os02g0770600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1644 family protein.
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Os02g0770600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1644 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.95 | 0.289 | 9.71 | 0.127 | 0.25 | 1.07 | -0.0732 | 0.486 | -0.141 | 4.85 | 24.92 | 89 | -- | -- |
| 38.29 | 0.288 | 9.7 | 0.194 | 0.246 | 1.05 | 0.082 | -- | -0.118 | 5.02 | 25 | 89 | -- | -- |
| 37.96 | 0.287 | 9.71 | 0.132 | 0.251 | 1.07 | -- | 0.456 | -0.141 | 4.97 | 24.92 | 89 | -- | -- |
| 38.29 | 0.288 | 9.7 | 0.193 | 0.249 | 1.03 | -- | -- | -0.123 | 4.9 | 25 | 86 | -- | -- |
| 40.3 | 0.296 | 9.7 | 0.159 | -- | 1.16 | -- | 0.478 | -0.0957 | -- | 25.95 | 116 | -- | -- |
| 53.35 | 0.342 | 9.75 | -0.0513 | 0.408 | -- | -0.0577 | -- | -0.325 | 3.66 | -- | -- | -- | -- |
| 53.36 | 0.342 | 9.75 | -0.0504 | 0.408 | -- | -- | -- | -0.325 | 3.68 | -- | -- | -- | -- |
| 40.65 | 0.297 | 9.69 | 0.235 | -- | 1.12 | -- | -- | -0.0776 | -- | 26.24 | 113 | -- | -- |
| 39.21 | 0.292 | 9.71 | -- | 0.266 | 0.946 | -- | -- | -0.161 | 4.78 | 24.99 | 79 | -- | -- |
| 62.59 | 0.37 | 9.75 | -0.0334 | -- | -- | -- | -- | -0.314 | -- | -- | -- | -- | -- |
| 53.42 | 0.342 | 9.74 | -- | 0.407 | -- | -- | -- | -0.319 | 3.69 | -- | -- | -- | -- |
| 41.98 | 0.302 | 9.7 | -- | -- | 1.04 | -- | -- | -0.118 | -- | 26.3 | 113 | -- | -- |
| 62.62 | 0.369 | 9.74 | -- | -- | -- | -- | -- | -0.31 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 9 | 29.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 22 | 30.36 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 31 | 30.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 57 | 31.51 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 9 |
| 73 | 32.11 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 9 |
| 241 | 34.35 | temperature | 20 | 10 | > th | dose independent | rect. | 8 | 21 |
| 263 | 34.63 | temperature | 20 | 90 | > th | dose independent | rect. | 8 | 20 |
| 264 | 34.63 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 22 |
| 269 | 34.64 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 275 | 34.77 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 302 | 35.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 309 | 35.31 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 15 |
| 325 | 35.45 | temperature | 25 | 270 | < th | dose dependent | sin | 12 | NA |
| 328 | 35.46 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 16 |
| 368 | 35.72 | temperature | 20 | 90 | < th | dose independent | rect. | 13 | 18 |
| 399 | 35.85 | temperature | 20 | 10 | < th | dose independent | rect. | 14 | 18 |
| 403 | 35.86 | temperature | 10 | 270 | > th | dose dependent | sin | 11 | NA |
| 405 | 35.87 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 467 | 36.16 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 17 |
| 501 | 36.30 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 18 |
| 576 | 36.62 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 646 | 36.88 | temperature | 20 | 90 | > th | dose independent | sin | 9 | NA |
| 669 | 36.98 | temperature | 20 | 90 | < th | dose independent | sin | 9 | NA |
| 692 | 37.10 | temperature | 10 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 706 | 37.15 | temperature | 20 | 10 | > th | dose independent | sin | 9 | NA |
| 707 | 37.15 | temperature | 20 | 10 | < th | dose independent | sin | 9 | NA |
| 790 | 37.51 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 801 | 37.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 804 | 37.62 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 8 |
| 846 | 37.73 | temperature | 25 | 720 | < th | dose dependent | sin | 18 | NA |
| 872 | 37.80 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 899 | 37.88 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 8 |
| 919 | 37.95 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 23 |
| 920 | 37.95 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 927 | 37.96 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 945 | 38.01 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 959 | 38.06 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |