BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0344800 Os09g0344800|AK067189
(481 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0344800 Protein of unknown function DUF81 family protein 763 0.0
Os08g0389700 Protein of unknown function DUF81 family protein 640 0.0
Os08g0387200 Protein of unknown function DUF81 family protein 577 e-165
Os03g0726500 Conserved hypothetical protein 310 2e-84
Os01g0786700 Conserved hypothetical protein 92 1e-18
>Os09g0344800 Protein of unknown function DUF81 family protein
Length = 481
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/481 (80%), Positives = 386/481 (80%)
Query: 1 MGRRTWQWHXXXXXXXXXXXXXXXXXXXXXFSVTSXXXXXXXXXXXXXXXTPEEVGILRK 60
MGRRTWQWH FSVTS TPEEVGILRK
Sbjct: 1 MGRRTWQWHAIAALGVACAAAAAVAADRRAFSVTSAAGGGAAAAAAVVAATPEEVGILRK 60
Query: 61 VANFLWQTDGNSYHHVWPEMELGWQIVLGSLXXXXXXXXXXXXXXXXXXXXVPMLTLIIG 120
VANFLWQTDGNSYHHVWPEMELGWQIVLGSL VPMLTLIIG
Sbjct: 61 VANFLWQTDGNSYHHVWPEMELGWQIVLGSLIGFFGAAFGSVGGVGGGGIFVPMLTLIIG 120
Query: 121 FDPKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVIF 180
FDPKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVIF
Sbjct: 121 FDPKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVIF 180
Query: 181 NVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKETIIKREAAKRLEQTSEEPEYAPLPT 240
NVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKETIIKREAAKRLEQTSEEPEYAPLPT
Sbjct: 181 NVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKETIIKREAAKRLEQTSEEPEYAPLPT 240
Query: 241 GPGAVADAKRPSDEAASLMKNIYWKEFGLLAFVWMAFLVLQVTKNYTATCSSWYWILNLL 300
GPGAVADAKRPSDEAASLMKNIYWKEFGLLAFVWMAFLVLQVTKNYTATCSSWYWILNLL
Sbjct: 241 GPGAVADAKRPSDEAASLMKNIYWKEFGLLAFVWMAFLVLQVTKNYTATCSSWYWILNLL 300
Query: 301 QIPVSVGVTMYEALGLMSGKRVLSSKGNEQTTLKFHQLCIYCFFGITAXXXXXXXXXXXX 360
QIPVSVGVTMYEALGLMSGKRVLSSKGNEQTTLKFHQLCIYCFFGITA
Sbjct: 301 QIPVSVGVTMYEALGLMSGKRVLSSKGNEQTTLKFHQLCIYCFFGITAGVVGGLLGLGGG 360
Query: 361 FIMGPLFLELGIPPQVXXXXXXXXXXXXXXXXVVEYYLLNRFPVPYALYXXXXXXXXXXX 420
FIMGPLFLELGIPPQV VVEYYLLNRFPVPYALY
Sbjct: 361 FIMGPLFLELGIPPQVSSATATFAMMFSSSMSVVEYYLLNRFPVPYALYFVIVAFIAAII 420
Query: 421 GQHVVRRLINWLGRASLIIFILAFMIFVSAISLGGVGISNMIHRINQHEYMGFENLCKYD 480
GQHVVRRLINWLGRASLIIFILAFMIFVSAISLGGVGISNMIHRINQHEYMGFENLCKYD
Sbjct: 421 GQHVVRRLINWLGRASLIIFILAFMIFVSAISLGGVGISNMIHRINQHEYMGFENLCKYD 480
Query: 481 A 481
A
Sbjct: 481 A 481
>Os08g0389700 Protein of unknown function DUF81 family protein
Length = 465
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/430 (72%), Positives = 344/430 (80%), Gaps = 1/430 (0%)
Query: 51 TPEEVGILRKVANFLWQTDGNSYHHVWPEMELGWQIVLGSLXXXXXXXXXXXXXXXXXXX 110
PEEVG +RKV NFLW + SYHHVWP ME GW+IVLG L
Sbjct: 36 APEEVGYMRKVVNFLWSGEA-SYHHVWPPMEFGWKIVLGILIGFFGAAFGSVGGVGGGGI 94
Query: 111 XVPMLTLIIGFDPKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPML 170
VPMLTLIIGFD KSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPML
Sbjct: 95 FVPMLTLIIGFDAKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPML 154
Query: 171 MLGISIGVIFNVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKETIIKREAAKRLEQTS 230
MLGISIGV+FNV+FPDWL+TVLLIILFLGTSTKAFLKGVETWKKETI+KREAAKRLEQ +
Sbjct: 155 MLGISIGVLFNVIFPDWLITVLLIILFLGTSTKAFLKGVETWKKETILKREAAKRLEQIA 214
Query: 231 EEPEYAPLPTGPGAVADAKRPSDEAASLMKNIYWKEFGLLAFVWMAFLVLQVTKNYTATC 290
EEPEY+PLPTGP A A++K PSDEAASL +N+YWKEFGLLAFVW+AFLVLQVTKNY TC
Sbjct: 215 EEPEYSPLPTGPNATAESKAPSDEAASLWQNVYWKEFGLLAFVWIAFLVLQVTKNYMPTC 274
Query: 291 SSWYWILNLLQIPVSVGVTMYEALGLMSGKRVLSSKGNEQTTLKFHQLCIYCFFGITAXX 350
S+WYW+LN LQIPVSVGVTMYE LGLM G+RV+SSKG+EQT LKFHQL +YCFFG+ A
Sbjct: 275 STWYWVLNFLQIPVSVGVTMYEGLGLMQGRRVISSKGDEQTNLKFHQLLVYCFFGMMAGV 334
Query: 351 XXXXXXXXXXFIMGPLFLELGIPPQVXXXXXXXXXXXXXXXXVVEYYLLNRFPVPYALYX 410
FIMGPLFLELGIPPQV VVEYYLL+RFPVPYAL+
Sbjct: 335 VGGLLGLGGGFIMGPLFLELGIPPQVSSATATFAMMFSSSMSVVEYYLLDRFPVPYALFF 394
Query: 411 XXXXXXXXXXGQHVVRRLINWLGRASLIIFILAFMIFVSAISLGGVGISNMIHRINQHEY 470
GQH+VR+LINWLGRASLIIFIL+FMIF+SAISLGGVGISNMI +I +HEY
Sbjct: 395 TVVAFFAAIIGQHIVRKLINWLGRASLIIFILSFMIFISAISLGGVGISNMIGKIARHEY 454
Query: 471 MGFENLCKYD 480
MGF+N+C YD
Sbjct: 455 MGFDNICNYD 464
>Os08g0387200 Protein of unknown function DUF81 family protein
Length = 469
Score = 577 bits (1488), Expect = e-165, Method: Compositional matrix adjust.
Identities = 289/425 (68%), Positives = 324/425 (76%), Gaps = 6/425 (1%)
Query: 58 LRKVANFLWQTDG-NSYHHVWPEMELGWQIVLGSLXXXXXXXXXXXXXXXXXXXXVPMLT 116
LRKVANFLW++ G NSYHHVWP ME GWQIVLGS +PMLT
Sbjct: 50 LRKVANFLWRSGGENSYHHVWPPMEFGWQIVLGSFVGFIGAAFGSIGGVGGGGFFMPMLT 109
Query: 117 LIIGFDPKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISI 176
LIIGFD KSS AISKCMIMGAAVSTVY NLK KHPTLDMPVIDYDLALLIQPMLMLGISI
Sbjct: 110 LIIGFDAKSSVAISKCMIMGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLMLGISI 169
Query: 177 GVIFNVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKETIIKREAAKRLEQTSEEPEYA 236
GVIFNV+FPDWLVTVLLIILFLGTSTKAFLKG+ETWKKETIIKREA KR EQTSEE EY
Sbjct: 170 GVIFNVIFPDWLVTVLLIILFLGTSTKAFLKGIETWKKETIIKREAEKRSEQTSEELEYR 229
Query: 237 PLPTGPGAVADAKRPSDEAASLMKNIYWKEFGLLAFVWMAFLVLQVTKNYTATCSSWYWI 296
P+P +++K PSDEA S++ N+YWKEFGLLAFVW+AFL LQVTKNY TCS+WYW+
Sbjct: 230 PVPA-----SESKPPSDEAVSILHNVYWKEFGLLAFVWIAFLALQVTKNYMPTCSTWYWV 284
Query: 297 LNLLQIPVSVGVTMYEALGLMSGKRVLSSKGNEQTTLKFHQLCIYCFFGITAXXXXXXXX 356
LNLLQIPVSVGVTMYE LGLM G+RV+SS GNEQT LKFHQL +YCFFGITA
Sbjct: 285 LNLLQIPVSVGVTMYEGLGLMQGRRVISSNGNEQTNLKFHQLLMYCFFGITAGIVAGLLG 344
Query: 357 XXXXFIMGPLFLELGIPPQVXXXXXXXXXXXXXXXXVVEYYLLNRFPVPYALYXXXXXXX 416
I+GP+FL+LG+PPQV VEYY L+RFPVPYALY
Sbjct: 345 VGGGSILGPMFLDLGVPPQVASATATFSMMFSASMSAVEYYFLDRFPVPYALYLTVVAFF 404
Query: 417 XXXXGQHVVRRLINWLGRASLIIFILAFMIFVSAISLGGVGISNMIHRINQHEYMGFENL 476
GQ +VR++INWLGRAS+IIF L+ MIF+S I LGG+GI N I +I +HEYMGFE++
Sbjct: 405 SAIVGQRMVRKVINWLGRASIIIFTLSIMIFLSTIPLGGIGIVNWIGKIERHEYMGFEDI 464
Query: 477 CKYDA 481
CK+DA
Sbjct: 465 CKFDA 469
>Os03g0726500 Conserved hypothetical protein
Length = 475
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/415 (40%), Positives = 244/415 (58%), Gaps = 11/415 (2%)
Query: 75 HVWPEMELGWQIVLGSLXXXXXXXXXXXXXXXXXXXXVPMLTLIIGFDPKSSTAISKCMI 134
VWP++ W++V+ ++ VPML L++GFD KS+ A+SKCMI
Sbjct: 60 RVWPDLAFNWRVVVATVVGFLGSAFGTVGGVGGGGIFVPMLNLLVGFDTKSAAALSKCMI 119
Query: 135 MGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVIFNVLFPDWLVTVLLI 194
MGA+ S+V+YNL++ HPT + PVIDY LALL QPMLMLGI+IGV +V+FP WL+TVL+I
Sbjct: 120 MGASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVLII 179
Query: 195 ILFLGTSTKAFLKGVETWKKETIIKREAAKRLEQTSEEPEYAPLPTGPGA---VADAKRP 251
ILF+GTS+++F KG+ WK ET I+ E +R E++ + P + +P
Sbjct: 180 ILFIGTSSRSFYKGILMWKDETRIQMETREREEESKSSCAARDVVIDPSCEEPLLCQPQP 239
Query: 252 SDEAA--SLMKNIYWKEFGLLAFVWMAFLVLQVTKNYTATCSSWYWILNLLQIPVSVGVT 309
+++A + + N+ WK +L VW +FLVLQ+ KN + +CS++YW++N+LQ+PV++ V
Sbjct: 240 KEKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNSQSCSTFYWVINILQVPVALSVF 299
Query: 310 MYEALGLMSGKRVLSSKGNEQTTLKFH------QLCIYCFFGITAXXXXXXXXXXXXFIM 363
++E + L R GN + + QL F G+ FI+
Sbjct: 300 LWEGVQLCRESRARRMDGNWECVCEASIEWSPAQLIFCAFCGLLGGTVGGLLGSGGGFIL 359
Query: 364 GPLFLELGIPPQVXXXXXXXXXXXXXXXXVVEYYLLNRFPVPYALYXXXXXXXXXXXGQH 423
GPL LELG PQV VVE+Y LNRFP+P+A+Y GQ
Sbjct: 360 GPLLLELGCIPQVASATATFVMMFSSSLSVVEFYFLNRFPIPFAVYLICISILAGFWGQS 419
Query: 424 VVRRLINWLGRASLIIFILAFMIFVSAISLGGVGISNMIHRINQHEYMGFENLCK 478
+VR+L++ L RASLI+FIL+ +IF SA+++G VG I IN HEYMGF + C+
Sbjct: 420 LVRKLVHVLKRASLIVFILSSVIFASALTMGVVGTQKSISMINNHEYMGFLDFCE 474
>Os01g0786700 Conserved hypothetical protein
Length = 300
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 25/178 (14%)
Query: 112 VPMLTLIIGFDPKSSTAISKCMIMGAAVSTVYYNL---KLKHPTLDMPVIDYDLALLIQP 168
VP+L ++ G K++TA S M+ G +S V Y L + P+IDYD+A++ QP
Sbjct: 31 VPILNIVAGLSLKTATAFSTFMVTGGTLSNVLYTLIVLRGHEKGGHQPLIDYDIAVVSQP 90
Query: 169 MLMLGISIGVIFNVLFPDWLVTVLLIILFLGTSTKAFLKGVETWKKETIIKREAAKRLEQ 228
L+LG+S+GVI NV+FP+WL+T L + + K + G++ W+ ET AA+R+ +
Sbjct: 91 CLLLGVSVGVICNVMFPEWLITALFAVFLASATFKTYGTGMKRWRAET----AAARRMLE 146
Query: 229 TSEEPEYAPLPTGPGAVADAKRPSD----EAASLMKNIYWKEFGLLAFVWMAFLVLQV 282
L G G ++ D + LM +L +W+ F V+ +
Sbjct: 147 GGSS-----LGDGAGEALLGQKDGDGHRRQCVDLM---------VLVTIWLCFFVIHL 190
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.140 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,539,418
Number of extensions: 419527
Number of successful extensions: 1680
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1666
Number of HSP's successfully gapped: 5
Length of query: 481
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 376
Effective length of database: 11,553,331
Effective search space: 4344052456
Effective search space used: 4344052456
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 158 (65.5 bits)